Strain Fitness in Agrobacterium fabrum C58 around Atu1985

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,949,331	-				+0.2
1,949,343	-				-0.4
1,949,349	+				+0.4
1,949,380	-		Atu1984	0.11	-0.5
1,949,531	-		Atu1984	0.25	+0.1
1,949,531	-		Atu1984	0.25	+0.5
1,949,642	-		Atu1984	0.36	-0.1
1,949,700	+		Atu1984	0.42	-0.6
1,949,700	+		Atu1984	0.42	-0.6
1,949,708	-		Atu1984	0.42	+0.8
1,949,708	-		Atu1984	0.42	-0.1
1,949,722	+		Atu1984	0.44	-0.3
1,949,937	-		Atu1984	0.64	-0.4
1,949,937	-		Atu1984	0.64	+0.1
1,950,041	+		Atu1984	0.74	-0.6
1,950,159	+		Atu1984	0.86	+1.5
1,950,228	-				+0.9
1,950,228	-				+0.3
1,950,228	-				+0.4
1,950,228	-				+0.0
1,950,317	-				-0.3
1,950,488	+		Atu1985	0.40	-0.0
1,950,773	+				+0.2
1,950,779	-				-0.3
1,950,804	-				-0.5
1,950,831	+				-0.7
1,951,024	-		Atu1986	0.19	+0.6
1,951,182	+		Atu1986	0.30	-0.7
1,951,182	+		Atu1986	0.30	-0.2
1,951,182	+		Atu1986	0.30	+0.9
1,951,265	-		Atu1986	0.36	-0.2
1,951,277	-		Atu1986	0.36	-1.4
1,951,326	+		Atu1986	0.40	+0.9
1,951,326	+		Atu1986	0.40	-0.6
1,951,334	-		Atu1986	0.40	-0.1
1,951,407	+		Atu1986	0.45	+0.2
1,951,474	+		Atu1986	0.50	-0.6
1,951,482	-		Atu1986	0.51	-0.2
1,951,596	-		Atu1986	0.58	+0.8
1,951,606	-		Atu1986	0.59	-0.5
1,951,647	+		Atu1986	0.62	+0.1
1,951,675	+		Atu1986	0.64	-1.9
1,951,675	+		Atu1986	0.64	-1.9
1,951,675	+		Atu1986	0.64	-0.2
1,951,676	-		Atu1986	0.64	+0.2
1,951,683	-		Atu1986	0.64	+0.1
1,951,683	-		Atu1986	0.64	+0.2
1,951,683	-		Atu1986	0.64	-0.1
1,951,699	-		Atu1986	0.65	-0.1