Strain Fitness in Agrobacterium fabrum C58 around Atu1921

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,898,655	-		Atu1920	0.14	-0.1
1,898,739	-		Atu1920	0.27	+2.1
1,898,752	+		Atu1920	0.29	-0.4
1,898,762	+		Atu1920	0.30	-1.0
1,898,830	-		Atu1920	0.41	+0.3
1,898,886	+		Atu1920	0.50	-0.1
1,898,924	+		Atu1920	0.55	+0.1
1,898,932	-		Atu1920	0.57	+0.1
1,898,980	-		Atu1920	0.64	+0.4
1,899,038	+		Atu1920	0.73	+0.3
1,899,051	-		Atu1920	0.75	+0.0
1,899,206	+				-0.2
1,899,378	+				-0.1
1,899,386	-				-0.6
1,899,386	-				-0.4
1,899,430	-				-0.1
1,899,631	+				+0.9
1,899,649	+				+1.3
1,899,667	+				+0.2
1,899,699	-				+0.5
1,899,723	-				-1.7
1,899,726	-				-0.0
1,899,931	-		Atu1921	0.32	+0.0
1,899,955	-		Atu1921	0.35	+1.2
1,900,009	+		Atu1921	0.41	+0.3
1,900,022	-		Atu1921	0.42	+0.5
1,900,080	-		Atu1921	0.49	+0.1
1,900,121	+		Atu1921	0.54	-0.1
1,900,254	+		Atu1921	0.69	+0.6
1,900,485	+				-0.0
1,900,583	+				-0.8
1,900,591	-				-0.3