Strain Fitness in Agrobacterium fabrum C58 around Atu1614

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,595,662	-		Atu8160	0.89	+0.9
1,595,744	-				-1.0
1,596,525	-				+0.3
1,596,676	+				+0.0
1,596,711	+		Atu1614	0.12	-0.4
1,596,715	-		Atu1614	0.13	-0.5
1,596,742	-		Atu1614	0.17	+0.0
1,596,834	-		Atu1614	0.30	-2.0
1,596,871	+		Atu1614	0.35	-0.5
1,596,903	-		Atu1614	0.40	-0.4
1,596,911	+		Atu1614	0.41	-0.9
1,596,967	-		Atu1614	0.49	-0.3
1,597,075	+		Atu1614	0.64	-0.7
1,597,123	+		Atu1614	0.71	-0.1
1,597,131	-		Atu1614	0.72	-0.3
1,597,133	+		Atu1614	0.72	-0.4
1,597,141	-		Atu1614	0.74	-0.2
1,597,399	+				-0.1
1,597,455	+				-0.5
1,597,478	-				-0.1
1,597,529	-				-0.1
1,597,580	+				-0.9
1,597,599	-				-0.6
1,597,640	+				-0.6
1,597,660	+				+0.5
1,597,686	-				-0.3
1,597,776	+		Atu1615	0.13	+0.5
1,597,981	+		Atu1615	0.23	-0.5
1,598,080	-		Atu1615	0.29	-0.7
1,598,208	+		Atu1615	0.35	-0.9
1,598,218	+		Atu1615	0.36	+0.0
1,598,219	+		Atu1615	0.36	+0.7