Strain Fitness in Agrobacterium fabrum C58 around Atu1568

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,553,837	-		Atu1567	0.24	-0.3
1,553,858	+		Atu1567	0.26	-0.2
1,553,871	+		Atu1567	0.27	+0.1
1,553,917	+		Atu1567	0.31	+0.0
1,553,953	+		Atu1567	0.34	-0.1
1,553,954	-		Atu1567	0.34	-0.0
1,554,087	+		Atu1567	0.45	-0.0
1,554,146	+		Atu1567	0.50	-0.2
1,554,313	+		Atu1567	0.64	+0.6
1,554,459	+		Atu1567	0.76	+0.3
1,554,491	+		Atu1567	0.79	-1.9
1,554,506	+		Atu1567	0.80	+0.7
1,554,519	-		Atu1567	0.81	+0.5
1,554,519	-		Atu1567	0.81	-0.1
1,554,648	+				+0.0
1,554,682	-				-0.1
1,554,726	+				-0.3
1,554,726	+				+0.4
1,554,726	+				+0.3
1,554,852	-				-0.4
1,554,895	-				+0.1
1,554,895	-				+0.1
1,554,895	-				-1.1
1,554,905	-		Atu1568	0.11	+0.5
1,554,907	-		Atu1568	0.12	-0.1
1,554,917	+		Atu1568	0.13	+0.3
1,554,924	-		Atu1568	0.14	-0.4
1,554,961	-		Atu1568	0.20	+0.3
1,554,961	-		Atu1568	0.20	+0.3
1,555,181	+		Atu1568	0.53	+0.2
1,555,181	+		Atu1568	0.53	+1.2
1,555,198	-		Atu1568	0.56	-1.3
1,555,242	-		Atu1568	0.62	+0.5
1,555,307	-		Atu1568	0.72	-0.1
1,555,362	-		Atu1568	0.80	+0.5
1,555,476	+				+0.6
1,555,759	-		Atu1569	0.11	+0.5
1,555,787	-		Atu1569	0.13	-1.4
1,555,854	-		Atu1569	0.18	-0.3
1,555,861	-		Atu1569	0.18	+0.5
1,555,861	-		Atu1569	0.18	-0.5
1,555,861	-		Atu1569	0.18	-0.2
1,555,861	-		Atu1569	0.18	-0.2
1,555,883	+		Atu1569	0.20	+0.6
1,556,073	+		Atu1569	0.33	+1.1
1,556,132	+		Atu1569	0.38	-0.3
1,556,220	-		Atu1569	0.44	-0.5
1,556,326	-		Atu1569	0.52	-0.4