Strain Fitness in Agrobacterium fabrum C58 around Atu1367

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,361,077	+		Atu8156	0.19	-1.2
1,361,160	-		Atu8156	0.30	-0.1
1,361,197	-		Atu8156	0.35	+0.1
1,361,257	+		Atu8156	0.43	+0.0
1,361,624	-				-0.8
1,361,825	-		Atu1366	0.39	+0.3
1,361,832	+		Atu1366	0.42	+0.3
1,361,850	-		Atu1366	0.47	-0.7
1,361,850	-		Atu1366	0.47	-0.5
1,361,850	-		Atu1366	0.47	-1.6
1,361,850	-		Atu1366	0.47	+0.5
1,361,850	-		Atu1366	0.47	+0.8
1,362,095	-				+0.7
1,362,223	+		Atu1367	0.21	+0.0
1,362,225	+		Atu1367	0.21	+0.3
1,362,238	-		Atu1367	0.22	+0.9
1,362,238	-		Atu1367	0.22	+0.0
1,362,291	+		Atu1367	0.28	-0.2
1,362,353	+		Atu1367	0.36	+0.2
1,362,376	+		Atu1367	0.38	+0.5
1,362,388	-		Atu1367	0.40	-0.2
1,362,397	+		Atu1367	0.41	+0.3
1,362,405	-		Atu1367	0.42	+0.2
1,362,417	-		Atu1367	0.43	+0.7
1,362,457	-		Atu1367	0.48	+2.1
1,362,499	+		Atu1367	0.52	+0.6
1,362,518	-		Atu1367	0.55	-0.1
1,362,551	+		Atu1367	0.58	+0.7
1,362,614	-		Atu1367	0.66	+0.6
1,362,680	-		Atu1367	0.73	-0.1
1,362,727	+		Atu1367	0.79	-0.5
1,362,733	+		Atu1367	0.79	+0.4
1,362,769	+		Atu1367	0.84	+0.8
1,362,789	-		Atu1367	0.86	-0.1
1,362,798	+		Atu1367	0.87	-0.9
1,362,844	+				-0.9
1,362,880	+				-0.9
1,362,938	-				+0.5
1,363,033	-				-1.8
1,363,044	-				-0.0
1,363,148	+		Atu1368	0.15	-0.2
1,363,156	-		Atu1368	0.16	-0.1
1,363,172	+		Atu1368	0.18	+1.2
1,363,194	+		Atu1368	0.20	-2.1
1,363,277	+		Atu1368	0.30	+2.1
1,363,277	+		Atu1368	0.30	+0.2
1,363,285	-		Atu1368	0.31	+0.1
1,363,365	+		Atu1368	0.40	-0.8
1,363,410	+		Atu1368	0.46	+0.3
1,363,453	-		Atu1368	0.51	-0.2
1,363,474	+		Atu1368	0.53	+0.7
1,363,491	+		Atu1368	0.55	-0.4
1,363,567	+		Atu1368	0.64	-0.3
1,363,616	+		Atu1368	0.70	-1.2