Strain Fitness in Agrobacterium fabrum C58 around Atu1208

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,200,798	-		Atu1207	0.24	-0.3
1,200,829	-		Atu1207	0.27	+0.5
1,200,863	+		Atu1207	0.29	+0.2
1,200,863	+		Atu1207	0.29	-0.2
1,200,898	-		Atu1207	0.32	-0.3
1,200,911	+		Atu1207	0.33	+1.8
1,200,911	+		Atu1207	0.33	-0.4
1,200,957	+		Atu1207	0.37	+0.4
1,200,970	+		Atu1207	0.38	-0.2
1,201,018	-		Atu1207	0.42	+0.2
1,201,070	-		Atu1207	0.46	-0.2
1,201,221	-		Atu1207	0.58	+0.1
1,201,251	-		Atu1207	0.60	+0.1
1,201,262	-		Atu1207	0.61	-0.2
1,201,487	-		Atu1207	0.79	-0.7
1,201,559	+		Atu1207	0.84	-0.2
1,201,559	+		Atu1207	0.84	+0.8
1,201,689	+				-0.5
1,201,689	+				-1.4
1,201,712	+				-0.4
1,201,720	-				+0.6
1,201,785	-				+0.2
1,201,928	+		Atu1208	0.22	+0.3
1,201,962	+		Atu1208	0.27	+0.6
1,202,003	+		Atu1208	0.34	+1.0
1,202,003	+		Atu1208	0.34	+0.5
1,202,011	-		Atu1208	0.35	+1.1
1,202,036	-		Atu1208	0.39	+0.6
1,202,137	+		Atu1208	0.55	+0.7
1,202,254	-		Atu1208	0.74	+0.9
1,202,263	-		Atu1208	0.76	+0.6
1,202,329	-		Atu1208	0.86	+0.7
1,202,343	-		Atu1208	0.89	+1.5
1,202,382	+				+0.6
1,202,382	+				+0.9
1,202,382	+				+0.5
1,202,390	-				+0.8
1,202,402	+				+0.4
1,202,414	+				+0.2
1,202,449	+				+0.1
1,202,455	-				+0.1
1,202,465	-				-0.1
1,202,670	+		Atu1209	0.11	+0.8
1,202,738	+		Atu1209	0.18	+1.0
1,202,765	-		Atu1209	0.21	-0.2
1,202,828	-		Atu1209	0.27	-0.3
1,203,008	+		Atu1209	0.46	+0.3
1,203,030	-		Atu1209	0.48	-0.2
1,203,067	+		Atu1209	0.52	+0.2
1,203,181	-		Atu1209	0.64	-0.0
1,203,181	-		Atu1209	0.64	-0.3
1,203,181	-		Atu1209	0.64	-0.2
1,203,212	+		Atu1209	0.67	-0.6
1,203,248	+		Atu1209	0.71	+0.4
1,203,266	-		Atu1209	0.73	+0.8
1,203,350	+		Atu1209	0.81	+1.8
1,203,350	+		Atu1209	0.81	+0.6