Strain Fitness in Agrobacterium fabrum C58 around Atu0983
Experiment: Acetosyringone 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Acetosyringone 5 mM |
---|---|---|---|---|---|
remove | |||||
976,752 | - | +0.1 | |||
976,752 | - | +0.4 | |||
976,752 | - | -0.1 | |||
976,998 | + | +1.2 | |||
977,032 | + | +0.0 | |||
977,085 | + | -0.5 | |||
977,085 | + | -0.0 | |||
977,085 | + | +0.1 | |||
977,130 | - | -0.7 | |||
977,134 | - | -0.1 | |||
977,163 | - | Atu0983 | 0.16 | +0.2 | |
977,291 | + | Atu0983 | 0.55 | +0.4 | |
977,460 | + | +0.5 | |||
977,538 | + | +0.6 | |||
977,551 | - | -0.3 | |||
977,573 | + | -0.2 | |||
977,749 | - | +0.2 | |||
977,776 | - | -0.2 | |||
977,799 | + | +0.3 | |||
977,831 | - | +0.2 | |||
977,859 | - | Atu0984 | 0.11 | +0.3 | |
978,032 | - | Atu0984 | 0.17 | +0.6 | |
978,105 | - | Atu0984 | 0.20 | +1.6 | |
978,280 | - | Atu0984 | 0.27 | +1.3 | |
978,324 | + | Atu0984 | 0.28 | -0.4 | |
978,418 | - | Atu0984 | 0.32 | +0.0 |
Or see this region's nucleotide sequence