Strain Fitness in Agrobacterium fabrum C58 around Atu8158

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,541,300	-		Atu1550	0.42	-0.4
1,541,331	-		Atu1550	0.48	+0.3
1,541,349	+		Atu1550	0.52	-0.7
1,541,357	-		Atu1550	0.54	-0.0
1,541,396	+		Atu1550	0.62	-0.1
1,541,536	-				+0.1
1,541,561	-				-0.1
1,541,596	+				+0.4
1,541,604	-				-0.1
1,541,604	-				-0.3
1,541,604	-				-0.9
1,541,620	+				+0.4
1,541,645	-		Atu1551	0.13	+0.1
1,541,652	-		Atu1551	0.15	+0.6
1,541,654	-		Atu1551	0.15	-0.9
1,541,745	-		Atu1551	0.36	-0.0
1,541,785	+		Atu1551	0.46	+0.5
1,541,785	-		Atu1551	0.46	-0.0
1,541,913	+		Atu1551	0.76	-0.3
1,541,915	+		Atu1551	0.76	-0.7
1,541,921	-		Atu1551	0.77	+0.1
1,541,921	-		Atu1551	0.77	-0.3
1,541,921	-		Atu1551	0.77	+0.1
1,541,926	-		Atu1551	0.79	-0.0
1,542,141	+				+0.6
1,542,146	+				-0.4
1,542,181	-		Atu8158	0.25	-0.4
1,542,181	-		Atu8158	0.25	-0.6
1,542,187	+		Atu8158	0.29	-0.1
1,542,230	+		Atu8158	0.54	-1.7
1,542,238	-		Atu8158	0.59	-0.4
1,542,300	+				+0.0
1,542,368	+				-0.6
1,542,376	-				+2.1
1,542,386	-				-0.3
1,542,428	-		Atu1553	0.12	+0.1
1,542,523	+		Atu1553	0.34	+0.1
1,542,531	-		Atu1553	0.36	-0.2
1,542,531	-		Atu1553	0.36	-0.3
1,542,900	+				+0.3
1,542,956	-				+1.2
1,542,983	+				-0.4
1,543,011	-				-0.9
1,543,107	+		Atu1554	0.57	+0.2
1,543,198	+				-0.2
1,543,249	-				-0.4