Strain Fitness in Agrobacterium fabrum C58 around Atu4574

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,721,123	+		Atu4572	0.86	-0.5
1,721,183	+				-0.0
1,721,203	+				-0.5
1,721,233	-				-0.4
1,721,295	+				+0.5
1,721,295	+				-0.2
1,721,295	+				-1.0
1,721,295	+				-0.1
1,721,295	+				-0.5
1,721,296	-				+0.3
1,721,438	-		Atu4573	0.24	+0.1
1,721,457	-		Atu4573	0.27	-0.5
1,721,492	+		Atu4573	0.31	-0.2
1,721,527	+		Atu4573	0.36	-0.2
1,721,583	+		Atu4573	0.43	-0.5
1,721,633	-		Atu4573	0.49	-0.4
1,721,669	+		Atu4573	0.54	-0.1
1,721,677	-		Atu4573	0.55	+0.1
1,721,686	-		Atu4573	0.56	+2.2
1,721,694	-		Atu4573	0.57	-0.8
1,721,898	+		Atu4573	0.83	+0.2
1,721,898	+		Atu4573	0.83	-0.6
1,721,906	-		Atu4573	0.84	+0.2
1,721,906	-		Atu4573	0.84	-0.5
1,721,906	-		Atu4573	0.84	+1.1
1,721,921	+		Atu4573	0.86	-0.1
1,721,941	-		Atu4573	0.88	-0.0
1,721,958	+				-0.1
1,721,958	+				-0.1
1,721,991	+				-0.5
1,721,999	-				-0.1
1,722,066	+				-0.4
1,722,111	+				+0.3
1,722,147	+				+0.0
1,722,147	+				-0.4
1,722,155	-				-0.2
1,722,244	+		Atu4574	0.20	-0.8
1,722,253	+		Atu4574	0.21	-0.4
1,722,326	-		Atu4574	0.31	-0.0
1,722,339	+		Atu4574	0.33	-1.2
1,722,455	-		Atu4574	0.48	+1.3
1,722,553	-		Atu4574	0.61	+0.2
1,722,571	+		Atu4574	0.64	+0.9
1,722,579	-		Atu4574	0.65	-0.7
1,722,590	+		Atu4574	0.66	-0.4
1,722,629	-		Atu4574	0.71	-0.7
1,722,633	-		Atu4574	0.72	-0.5
1,722,662	+		Atu4574	0.76	+1.3
1,722,667	-		Atu4574	0.76	-2.5
1,722,685	+		Atu4574	0.79	+0.0
1,722,726	+		Atu4574	0.84	-2.1
1,722,781	+				+0.1
1,722,869	+				+0.6
1,723,049	+		Atu4575	0.16	+0.3
1,723,067	-		Atu4575	0.17	+1.0
1,723,070	+		Atu4575	0.18	+0.3
1,723,073	-		Atu4575	0.18	+0.3
1,723,075	+		Atu4575	0.18	-0.2
1,723,266	-		Atu4575	0.38	-1.2
1,723,439	+		Atu4575	0.56	+0.4
1,723,511	-		Atu4575	0.63	-0.0
1,723,531	+		Atu4575	0.66	-0.0