Strain Fitness in Agrobacterium fabrum C58 around Atu3018

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
10,296	+		Atu3015	0.54	-0.1
10,318	+		Atu3015	0.58	-0.1
10,323	+		Atu3015	0.59	-0.7
10,326	-		Atu3015	0.59	+0.3
10,355	+		Atu3015	0.65	-0.7
10,403	-		Atu3015	0.73	+1.6
10,443	+		Atu3015	0.81	+0.9
10,445	+		Atu3015	0.81	+0.3
10,602	+				-0.6
10,611	+				+0.3
10,631	+		Atu3016	0.14	+0.5
10,649	-		Atu3016	0.20	-0.3
10,682	-		Atu3016	0.31	-0.1
10,689	+		Atu3016	0.33	-0.1
10,697	-		Atu3016	0.36	-1.7
10,774	+		Atu3016	0.62	-0.2
10,787	-		Atu3016	0.66	-0.0
10,794	+		Atu3016	0.68	-0.3
10,800	+		Atu3016	0.70	-0.3
10,862	-				+1.0
11,146	+		Atu3017	0.89	+0.5
11,166	+				-0.1
11,166	+				-0.5
11,178	+				+0.5
11,241	-				+0.4
11,289	+		Atu3018	0.10	+0.7
11,303	+		Atu3018	0.14	-0.5
11,303	+		Atu3018	0.14	+0.5
11,314	+		Atu3018	0.17	+1.1
11,332	+		Atu3018	0.22	+0.3
11,398	-		Atu3018	0.39	+0.3
11,539	-		Atu3018	0.76	-0.3
11,584	+		Atu3018	0.87	-0.5
11,594	+				-0.1
11,602	-				-0.2
11,613	-				-0.5
11,773	+		Atu3019	0.13	-0.4
11,818	+		Atu3019	0.21	+0.0
11,887	+		Atu3019	0.34	+0.9
11,887	+		Atu3019	0.34	+2.3
11,890	+		Atu3019	0.35	-0.7
11,895	-		Atu3019	0.36	+0.0
11,934	+		Atu3019	0.43	-0.4
11,936	+		Atu3019	0.43	+0.4
11,942	-		Atu3019	0.45	-0.9
11,978	+		Atu3019	0.51	+1.0
11,986	-		Atu3019	0.53	-0.4
12,044	-		Atu3019	0.64	+0.4
12,112	-		Atu3019	0.76	+0.1
12,142	+		Atu3019	0.82	-0.1
12,223	-				+0.1
12,237	-				-1.1
12,294	+				-1.0
12,358	-				+0.2
12,380	-				+0.1
12,392	+				-0.1
12,397	+				-0.4
12,476	+				-0.3
12,483	+				-0.5
12,483	+				+0.3
12,491	-				+0.4
12,491	-				+0.3
12,491	-				+0.3
12,497	+				-1.2