Strain Fitness in Agrobacterium fabrum C58 around Atu3011

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
6,549	+				+0.1
6,549	+				-0.3
6,647	-				+1.9
6,673	-				+1.4
6,678	-				-1.5
6,715	-		Atu3010	0.12	+0.2
6,736	+		Atu3010	0.14	+1.2
6,736	+		Atu3010	0.14	+0.6
6,736	+		Atu3010	0.14	+0.5
6,834	-		Atu3010	0.25	-0.4
6,854	-		Atu3010	0.27	-1.6
6,869	+		Atu3010	0.29	+0.9
6,912	-		Atu3010	0.33	+1.2
6,952	+		Atu3010	0.38	+0.9
7,007	+		Atu3010	0.44	+1.0
7,060	+		Atu3010	0.49	+0.9
7,111	-		Atu3010	0.55	+0.7
7,111	-		Atu3010	0.55	-0.7
7,111	-		Atu3010	0.55	+0.2
7,185	-		Atu3010	0.63	+0.5
7,194	+		Atu3010	0.64	+0.4
7,202	-		Atu3010	0.65	+0.9
7,311	+		Atu3010	0.77	+0.9
7,357	+		Atu3010	0.81	+0.3
7,364	+		Atu3010	0.82	+1.0
7,365	+		Atu3010	0.82	+0.0
7,366	-		Atu3010	0.82	+0.3
7,383	-		Atu3010	0.84	+0.2
7,403	+		Atu3010	0.86	+0.2
7,403	+		Atu3010	0.86	-0.5
7,411	-		Atu3010	0.87	+0.9
7,411	-		Atu3010	0.87	+1.3
7,411	-		Atu3010	0.87	+0.4
7,429	-		Atu3010	0.89	-1.1
7,515	+				+0.9
7,588	-		Atu3011	0.18	+0.3
7,678	-		Atu3011	0.43	+0.2
7,678	-		Atu3011	0.43	+0.2
7,758	-		Atu3011	0.66	+0.9
7,760	-		Atu3011	0.66	+0.4
7,945	-				+0.0
7,969	-				+0.2
7,993	+				+0.4
7,993	+				+0.1
8,001	-				-0.1
8,001	-				+0.5
8,001	-				-0.1
8,046	-				+0.3
8,046	-				+0.1
8,055	+				+0.1
8,069	+				+0.6
8,077	-				+0.6
8,161	+				+0.5
8,251	-		Atu3012	0.23	+1.1
8,268	+		Atu3012	0.25	+0.5
8,465	-		Atu3012	0.54	-0.7
8,682	+		Atu3012	0.85	-0.3
8,730	+				+1.7
8,769	-				-0.9