Strain Fitness in Agrobacterium fabrum C58 around Atu2306

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
2,280,984	-		Atu2305	0.36	+0.4
2,281,086	-		Atu2305	0.44	-0.4
2,281,091	-		Atu2305	0.45	+0.5
2,281,162	+		Atu2305	0.50	-0.7
2,281,239	-		Atu2305	0.57	+0.4
2,281,267	+		Atu2305	0.59	+0.1
2,281,323	-		Atu2305	0.64	-0.1
2,281,402	-		Atu2305	0.71	-0.1
2,281,483	+		Atu2305	0.77	-0.2
2,281,520	+		Atu2305	0.81	+0.1
2,281,640	+				+0.2
2,281,648	-				-1.3
2,281,683	-				+0.4
2,281,694	-				+0.9
2,281,909	+				-0.3
2,281,943	-				-0.3
2,281,943	-				+0.3
2,282,046	+		Atu2306	0.11	-0.7
2,282,046	+		Atu2306	0.11	-1.7
2,282,310	-		Atu2306	0.46	-0.9
2,282,320	-		Atu2306	0.48	-0.2
2,282,466	-		Atu2306	0.67	-0.9
2,282,511	+		Atu2306	0.73	-0.5
2,282,563	+		Atu2306	0.80	-0.2
2,282,635	+		Atu2306	0.89	-1.8
2,282,643	+				-0.7
2,282,675	-				-0.8
2,282,682	-				-1.2
2,282,684	+				-1.0
2,282,723	+				-0.4
2,282,739	-				-0.1
2,282,985	-		Atu2307	0.20	+0.0
2,283,018	+		Atu2307	0.23	+0.9
2,283,026	+		Atu2307	0.24	-0.6
2,283,026	+		Atu2307	0.24	-0.2
2,283,034	-		Atu2307	0.25	+0.5
2,283,036	-		Atu2307	0.25	-0.3
2,283,102	-		Atu2307	0.31	-0.5
2,283,128	+		Atu2307	0.34	-0.1
2,283,169	-		Atu2307	0.38	-1.1
2,283,198	+		Atu2307	0.40	+0.7
2,283,468	-		Atu2307	0.66	-0.4
2,283,637	-		Atu2307	0.82	+0.0
2,283,706	+		Atu2307	0.88	+0.6
2,283,714	-		Atu2307	0.89	+0.4