Strain Fitness in Agrobacterium fabrum C58 around Atu2045

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
2,003,071	+				+0.1
2,003,072	-				+0.2
2,003,079	-				+0.7
2,003,086	-				-0.5
2,003,169	-				-0.8
2,003,174	-				-0.4
2,003,253	-		Atu2044	0.12	-1.0
2,003,395	-		Atu2044	0.27	-0.2
2,003,441	-		Atu2044	0.32	-1.3
2,003,452	+		Atu2044	0.33	-0.9
2,003,524	-		Atu2044	0.41	-0.9
2,003,625	-		Atu2044	0.52	-0.3
2,003,737	-		Atu2044	0.64	-0.4
2,003,951	-		Atu2044	0.87	-0.6
2,003,956	-		Atu2044	0.88	-1.4
2,004,177	+				-0.7
2,004,233	-		Atu2045	0.15	-0.9
2,004,243	-		Atu2045	0.16	-0.8
2,004,345	-		Atu2045	0.25	-0.7
2,004,508	-		Atu2045	0.39	-1.3
2,004,696	-		Atu2045	0.56	-1.0
2,004,916	+		Atu2045	0.76	-2.3
2,005,262	+				-1.1
2,005,281	-				-0.2