Strain Fitness in Agrobacterium fabrum C58 around Atu1361

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
1,353,491	-		Atu1360	0.25	+0.1
1,353,491	-		Atu1360	0.25	+0.3
1,353,491	-		Atu1360	0.25	-0.2
1,353,534	+		Atu1360	0.28	-0.3
1,353,567	+		Atu1360	0.31	+0.2
1,353,609	+		Atu1360	0.34	-0.0
1,353,617	-		Atu1360	0.35	-1.3
1,353,631	+		Atu1360	0.36	-0.4
1,353,636	+		Atu1360	0.36	+0.1
1,353,636	+		Atu1360	0.36	-0.5
1,353,639	-		Atu1360	0.37	-1.3
1,353,662	+		Atu1360	0.38	-0.6
1,353,691	+		Atu1360	0.41	+0.4
1,353,696	+		Atu1360	0.41	+0.2
1,353,740	+		Atu1360	0.45	+0.0
1,353,740	+		Atu1360	0.45	-0.3
1,353,753	-		Atu1360	0.46	-0.3
1,353,782	-		Atu1360	0.48	+0.2
1,353,864	+		Atu1360	0.55	-1.3
1,353,960	-		Atu1360	0.62	-0.4
1,354,060	+		Atu1360	0.70	-0.5
1,354,065	+		Atu1360	0.71	-0.3
1,354,065	+		Atu1360	0.71	+0.5
1,354,108	-		Atu1360	0.74	-0.5
1,354,181	+		Atu1360	0.80	-0.2
1,354,227	-		Atu1360	0.84	+0.3
1,354,290	+		Atu1360	0.89	-0.8
1,354,303	-				-0.9
1,354,532	+				-0.2
1,354,609	-		Atu1361	0.28	-0.1
1,354,653	+		Atu1361	0.39	-0.2
1,354,653	+		Atu1361	0.39	-1.1
1,354,679	-		Atu1361	0.45	-0.1
1,354,679	-		Atu1361	0.45	-0.3
1,354,784	-		Atu1361	0.70	-0.8
1,354,784	-		Atu1361	0.70	-1.8
1,354,791	-		Atu1361	0.72	-0.3
1,354,830	+		Atu1361	0.81	-0.4
1,354,878	+				-0.5
1,354,881	-				-0.3
1,354,924	+				-0.6
1,354,924	+				+0.7
1,354,932	-				+0.1
1,354,932	-				+1.2
1,354,932	-				-0.5
1,355,076	+				+0.2