Strain Fitness in Agrobacterium fabrum C58 around Atu0181

Experiment: Acetosyringone 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Acetosyringone 5 mM
183,479	-		Atu0179	0.65	-0.4
183,545	-		Atu0179	0.71	+0.5
183,546	-		Atu0179	0.71	+0.1
183,566	+		Atu0179	0.73	+0.4
183,573	+		Atu0179	0.73	-0.1
183,573	+		Atu0179	0.73	+0.0
183,623	-		Atu0179	0.78	-0.6
183,644	-		Atu0179	0.80	-0.2
183,782	+				+0.3
183,824	+				-1.1
183,848	+				+0.3
183,855	-				+0.5
183,868	-				-0.6
183,882	+				+0.4
183,883	-				+0.1
183,883	-				+0.6
183,942	-		Atu0180	0.12	+1.0
183,948	-		Atu0180	0.13	-0.1
183,968	+		Atu0180	0.16	+0.4
183,970	+		Atu0180	0.17	+0.6
183,983	-		Atu0180	0.19	-1.1
183,983	-		Atu0180	0.19	+0.4
184,121	-		Atu0180	0.41	-0.1
184,158	+		Atu0180	0.47	+0.5
184,238	+		Atu0180	0.60	+0.2
184,251	+		Atu0180	0.62	-0.4
184,259	-		Atu0180	0.64	-0.7
184,339	+		Atu0180	0.77	-0.5
184,366	+		Atu0180	0.81	+0.1
184,400	-		Atu0180	0.87	+0.1
184,475	+				-0.1
184,483	-				+0.6
184,483	-				-0.0
184,483	-				-0.1
184,487	+				-0.2
184,582	-		Atu0181	0.23	+0.5
184,618	-		Atu0181	0.31	-0.2
184,694	-		Atu0181	0.47	-0.8
184,782	-		Atu0181	0.66	-1.1
184,843	+		Atu0181	0.79	+0.1
185,086	+				+0.3
185,086	+				-2.4
185,220	+		Atu0182	0.27	-0.8
185,264	-		Atu0182	0.33	-0.5
185,323	+		Atu0182	0.41	+2.4
185,449	+		Atu0182	0.58	+0.1
185,449	+		Atu0182	0.58	-0.4
185,479	+		Atu0182	0.62	-0.7