Experiment: Salicylic 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5035 and Atu5036 are separated by 50 nucleotides Atu5036 and Atu5037 are separated by 52 nucleotides
Atu5035: Atu5035 - hypothetical protein, at 35,532 to 36,428
Atu5035
Atu5036: Atu5036 - hypothetical protein, at 36,479 to 36,865
Atu5036
Atu5037: Atu5037 - hypothetical protein, at 36,918 to 37,697
Atu5037
Position (kb) 36
37
38 Strain fitness (log2 ratio) -1
0
1
2 at 35.918 kb on + strand, within Atu5035 at 36.025 kb on - strand, within Atu5035 at 36.067 kb on - strand, within Atu5035 at 36.072 kb on - strand, within Atu5035 at 36.168 kb on + strand, within Atu5035 at 36.283 kb on - strand, within Atu5035 at 36.381 kb on - strand at 36.402 kb on + strand at 36.411 kb on - strand at 36.424 kb on - strand at 36.444 kb on - strand at 36.457 kb on - strand at 36.469 kb on + strand at 36.475 kb on - strand at 36.475 kb on - strand at 36.578 kb on - strand, within Atu5036 at 36.578 kb on - strand, within Atu5036 at 36.593 kb on + strand, within Atu5036 at 36.638 kb on + strand, within Atu5036 at 36.678 kb on - strand, within Atu5036 at 36.682 kb on + strand, within Atu5036 at 36.687 kb on + strand, within Atu5036 at 36.748 kb on + strand, within Atu5036 at 36.748 kb on - strand, within Atu5036 at 36.755 kb on - strand, within Atu5036 at 36.770 kb on + strand, within Atu5036 at 36.770 kb on + strand, within Atu5036 at 36.795 kb on + strand, within Atu5036 at 36.803 kb on - strand, within Atu5036 at 36.881 kb on - strand at 36.901 kb on + strand at 36.909 kb on - strand at 36.941 kb on + strand at 37.049 kb on + strand, within Atu5037 at 37.066 kb on + strand, within Atu5037 at 37.160 kb on + strand, within Atu5037 at 37.161 kb on + strand, within Atu5037 at 37.210 kb on - strand, within Atu5037 at 37.215 kb on + strand, within Atu5037 at 37.222 kb on - strand, within Atu5037 at 37.255 kb on - strand, within Atu5037 at 37.288 kb on - strand, within Atu5037 at 37.311 kb on - strand, within Atu5037 at 37.351 kb on - strand, within Atu5037 at 37.351 kb on - strand, within Atu5037 at 37.370 kb on - strand, within Atu5037 at 37.373 kb on + strand, within Atu5037 at 37.380 kb on - strand, within Atu5037 at 37.382 kb on + strand, within Atu5037 at 37.408 kb on + strand, within Atu5037 at 37.408 kb on + strand, within Atu5037 at 37.408 kb on + strand, within Atu5037 at 37.408 kb on + strand, within Atu5037 at 37.415 kb on - strand, within Atu5037 at 37.588 kb on - strand, within Atu5037 at 37.637 kb on - strand at 37.689 kb on + strand at 37.777 kb on + strand at 37.787 kb on + strand at 37.822 kb on - strand at 37.845 kb on + strand at 37.846 kb on + strand at 37.853 kb on - strand at 37.853 kb on - strand at 37.856 kb on + strand at 37.856 kb on + strand at 37.980 kb on + strand at 38.122 kb on - strand at 38.152 kb on - strand at 38.191 kb on - strand at 38.267 kb on + strand at 38.275 kb on - strand at 38.280 kb on - strand at 38.316 kb on - strand at 38.324 kb on + strand at 38.354 kb on + strand at 38.390 kb on + strand at 38.398 kb on - strand at 38.398 kb on - strand at 38.421 kb on + strand at 38.438 kb on + strand at 38.446 kb on - strand at 38.446 kb on - strand at 38.511 kb on + strand at 38.519 kb on - strand at 38.519 kb on - strand at 38.553 kb on + strand at 38.561 kb on - strand at 38.563 kb on + strand at 38.563 kb on + strand at 38.571 kb on - strand at 38.571 kb on - strand at 38.571 kb on - strand at 38.595 kb on - strand at 38.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Salicylic 1.25 mM remove 35,918 + Atu5035 0.43 +1.2 36,025 - Atu5035 0.55 -0.1 36,067 - Atu5035 0.60 -0.3 36,072 - Atu5035 0.60 -0.3 36,168 + Atu5035 0.71 -0.0 36,283 - Atu5035 0.84 +0.5 36,381 - -0.1 36,402 + +0.6 36,411 - -0.3 36,424 - -0.4 36,444 - +0.2 36,457 - -0.4 36,469 + +0.3 36,475 - -0.1 36,475 - -0.2 36,578 - Atu5036 0.26 -0.0 36,578 - Atu5036 0.26 -0.0 36,593 + Atu5036 0.29 +0.2 36,638 + Atu5036 0.41 +0.6 36,678 - Atu5036 0.51 -0.4 36,682 + Atu5036 0.52 -0.5 36,687 + Atu5036 0.54 -0.2 36,748 + Atu5036 0.70 -0.4 36,748 - Atu5036 0.70 +0.2 36,755 - Atu5036 0.71 -0.3 36,770 + Atu5036 0.75 -0.3 36,770 + Atu5036 0.75 -0.1 36,795 + Atu5036 0.82 -1.0 36,803 - Atu5036 0.84 -0.5 36,881 - -0.5 36,901 + -0.3 36,909 - +0.6 36,941 + +0.1 37,049 + Atu5037 0.17 +0.9 37,066 + Atu5037 0.19 +1.8 37,160 + Atu5037 0.31 -0.1 37,161 + Atu5037 0.31 -0.3 37,210 - Atu5037 0.37 +0.3 37,215 + Atu5037 0.38 +0.2 37,222 - Atu5037 0.39 +0.3 37,255 - Atu5037 0.43 +0.7 37,288 - Atu5037 0.47 +0.1 37,311 - Atu5037 0.50 +0.7 37,351 - Atu5037 0.56 +0.3 37,351 - Atu5037 0.56 -0.2 37,370 - Atu5037 0.58 +0.3 37,373 + Atu5037 0.58 -0.1 37,380 - Atu5037 0.59 -0.0 37,382 + Atu5037 0.59 +0.1 37,408 + Atu5037 0.63 -0.1 37,408 + Atu5037 0.63 +0.2 37,408 + Atu5037 0.63 +0.6 37,408 + Atu5037 0.63 -0.2 37,415 - Atu5037 0.64 +0.2 37,588 - Atu5037 0.86 +0.2 37,637 - -0.3 37,689 + -0.1 37,777 + +0.4 37,787 + +1.9 37,822 - +1.5 37,845 + -0.0 37,846 + +0.3 37,853 - +0.0 37,853 - -0.2 37,856 + +0.4 37,856 + -0.1 37,980 + -0.1 38,122 - -1.0 38,152 - -1.4 38,191 - +0.0 38,267 + -0.2 38,275 - -0.4 38,280 - -0.2 38,316 - -0.3 38,324 + +0.1 38,354 + -0.0 38,390 + -0.3 38,398 - -0.1 38,398 - -0.3 38,421 + +0.2 38,438 + +0.7 38,446 - +0.0 38,446 - -0.1 38,511 + -0.3 38,519 - +0.3 38,519 - -0.3 38,553 + -0.2 38,561 - -0.3 38,563 + -0.1 38,563 + -0.1 38,571 - -0.3 38,571 - -0.1 38,571 - -0.5 38,595 - +0.1 38,689 + -0.0
Or see this region's nucleotide sequence