Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22315

Experiment: 3.75mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3.75mM_PTB
4,826,015	-		DZA65_RS22310	0.35	-0.0
4,826,015	-		DZA65_RS22310	0.35	-0.0
4,826,016	+		DZA65_RS22310	0.35	-1.0
4,826,016	+		DZA65_RS22310	0.35	-0.2
4,826,016	+		DZA65_RS22310	0.35	+0.2
4,826,016	+		DZA65_RS22310	0.35	-0.4
4,826,016	+		DZA65_RS22310	0.35	-1.7
4,826,017	-		DZA65_RS22310	0.35	-0.0
4,826,017	-		DZA65_RS22310	0.35	+1.6
4,826,017	-		DZA65_RS22310	0.35	+0.5
4,826,050	+		DZA65_RS22310	0.37	-0.8
4,826,069	-		DZA65_RS22310	0.38	+0.8
4,826,069	-		DZA65_RS22310	0.38	-0.1
4,826,069	-		DZA65_RS22310	0.38	+0.3
4,826,134	+		DZA65_RS22310	0.42	+0.6
4,826,183	+		DZA65_RS22310	0.46	-1.0
4,826,184	-		DZA65_RS22310	0.46	-1.0
4,826,184	-		DZA65_RS22310	0.46	-1.0
4,826,271	+		DZA65_RS22310	0.51	-0.0
4,826,271	+		DZA65_RS22310	0.51	-0.7
4,826,272	-		DZA65_RS22310	0.52	-0.6
4,826,287	+		DZA65_RS22310	0.53	+1.5
4,826,287	+		DZA65_RS22310	0.53	-0.2
4,826,288	-		DZA65_RS22310	0.53	-0.8
4,826,288	-		DZA65_RS22310	0.53	+2.3
4,826,419	+		DZA65_RS22310	0.61	-0.0
4,826,419	+		DZA65_RS22310	0.61	+0.0
4,826,419	+		DZA65_RS22310	0.61	-0.8
4,826,419	+		DZA65_RS22310	0.61	-1.0
4,826,419	+		DZA65_RS22310	0.61	+0.2
4,826,419	+		DZA65_RS22310	0.61	-1.6
4,826,420	-		DZA65_RS22310	0.61	-0.6
4,826,420	-		DZA65_RS22310	0.61	-0.0
4,826,420	-		DZA65_RS22310	0.61	+0.4
4,826,420	-		DZA65_RS22310	0.61	+0.2
4,826,420	-				-0.0
4,826,420	-		DZA65_RS22310	0.61	-0.3
4,826,420	-		DZA65_RS22310	0.61	+0.6
4,826,420	-		DZA65_RS22310	0.61	-1.0
4,826,420	-		DZA65_RS22310	0.61	+0.7
4,826,420	-		DZA65_RS22310	0.61	-1.0
4,826,421	+		DZA65_RS22310	0.61	-1.6
4,826,421	+		DZA65_RS22310	0.61	+0.6
4,826,421	+		DZA65_RS22310	0.61	-0.7
4,826,421	+		DZA65_RS22310	0.61	-0.1
4,826,421	+		DZA65_RS22310	0.61	-0.4
4,826,421	+		DZA65_RS22310	0.61	-0.0
4,826,421	+		DZA65_RS22310	0.61	-2.3
4,826,421	+		DZA65_RS22310	0.61	-0.0
4,826,421	+		DZA65_RS22310	0.61	+0.1
4,826,421	+		DZA65_RS22310	0.61	+1.0
4,826,421	+		DZA65_RS22310	0.61	-0.4
4,826,421	+		DZA65_RS22310	0.61	-2.2
4,826,421	+		DZA65_RS22310	0.61	+0.3
4,826,421	+		DZA65_RS22310	0.61	+0.7
4,826,421	+		DZA65_RS22310	0.61	-0.3
4,826,421	+		DZA65_RS22310	0.61	+0.7
4,826,421	+		DZA65_RS22310	0.61	+0.4
4,826,421	+		DZA65_RS22310	0.61	+0.2
4,826,421	+		DZA65_RS22310	0.61	-1.1
4,826,421	+		DZA65_RS22310	0.61	-1.5
4,826,421	+		DZA65_RS22310	0.61	-0.3
4,826,421	+		DZA65_RS22310	0.61	+1.6
4,826,421	+		DZA65_RS22310	0.61	-1.1
4,826,421	+		DZA65_RS22310	0.61	-2.0
4,826,421	+		DZA65_RS22310	0.61	+0.6
4,826,422	-		DZA65_RS22310	0.61	+0.3
4,826,422	-		DZA65_RS22310	0.61	-0.6
4,826,422	-		DZA65_RS22310	0.61	-0.7
4,826,422	-		DZA65_RS22310	0.61	-0.0
4,826,422	-		DZA65_RS22310	0.61	-0.3
4,826,422	-		DZA65_RS22310	0.61	+0.3
4,826,422	-		DZA65_RS22310	0.61	-0.2
4,826,422	-		DZA65_RS22310	0.61	-0.8
4,826,422	-		DZA65_RS22310	0.61	-1.0
4,826,422	-		DZA65_RS22310	0.61	+0.4
4,826,422	-		DZA65_RS22310	0.61	-0.0
4,826,422	-		DZA65_RS22310	0.61	-1.2
4,826,422	-		DZA65_RS22310	0.61	-0.4
4,826,422	-		DZA65_RS22310	0.61	+0.7
4,826,422	-		DZA65_RS22310	0.61	-1.6
4,826,422	-		DZA65_RS22310	0.61	-0.7
4,826,422	-		DZA65_RS22310	0.61	-0.3
4,826,422	-		DZA65_RS22310	0.61	+1.0
4,826,422	-		DZA65_RS22310	0.61	-0.8
4,826,455	+		DZA65_RS22310	0.64	-0.8
4,826,610	+		DZA65_RS22310	0.74	-0.1
4,826,652	+		DZA65_RS22310	0.77	-0.3
4,826,652	+		DZA65_RS22310	0.77	-0.5
4,826,652	+		DZA65_RS22310	0.77	-1.8
4,826,652	+		DZA65_RS22310	0.77	+0.7
4,826,652	+		DZA65_RS22310	0.77	-1.0
4,826,652	+		DZA65_RS22310	0.77	-2.5
4,826,652	+		DZA65_RS22310	0.77	-0.0
4,826,653	-		DZA65_RS22310	0.77	+0.1
4,826,653	-		DZA65_RS22310	0.77	-1.1
4,826,653	-		DZA65_RS22310	0.77	-1.2
4,826,653	-		DZA65_RS22310	0.77	-0.3
4,826,653	-		DZA65_RS22310	0.77	+0.1
4,826,689	+		DZA65_RS22310	0.79	+0.2
4,826,690	-		DZA65_RS22310	0.79	-0.2
4,826,690	-		DZA65_RS22310	0.79	-1.5
4,826,690	-		DZA65_RS22310	0.79	+1.2
4,826,711	-		DZA65_RS22310	0.80	+0.2
4,826,759	-		DZA65_RS22310	0.84	+0.5
4,826,847	+		DZA65_RS22310	0.89	-1.0
4,826,861	+				-0.0
4,826,861	+				-1.0
4,826,861	+				-0.0
4,826,861	+				-0.6
4,826,861	+				-1.2
4,826,862	-				-0.2
4,826,862	-				+1.4
4,826,862	-				-0.6
4,826,925	+				+3.0
4,826,996	+				-0.0
4,826,996	+				+0.3
4,826,997	-				+0.1
4,826,997	-				-0.1
4,826,997	-				+0.2
4,827,012	-				+0.7
4,827,012	-				+1.1
4,827,052	+				-0.3
4,827,052	+				-0.3
4,827,077	+		DZA65_RS22315	0.15	-0.0
4,827,078	-				-0.0
4,827,127	+				+0.3
4,827,127	+		DZA65_RS22315	0.27	-1.8
4,827,127	+		DZA65_RS22315	0.27	+1.0
4,827,127	+		DZA65_RS22315	0.27	+0.7
4,827,127	+		DZA65_RS22315	0.27	-0.0
4,827,127	+		DZA65_RS22315	0.27	-0.4
4,827,127	+		DZA65_RS22315	0.27	-2.2
4,827,127	+		DZA65_RS22315	0.27	+0.5
4,827,127	+		DZA65_RS22315	0.27	-0.0
4,827,128	-		DZA65_RS22315	0.27	-0.7
4,827,128	-		DZA65_RS22315	0.27	+0.2
4,827,128	-		DZA65_RS22315	0.27	-1.3
4,827,128	-		DZA65_RS22315	0.27	+0.0
4,827,128	-		DZA65_RS22315	0.27	+0.2
4,827,128	-		DZA65_RS22315	0.27	+0.1
4,827,128	-		DZA65_RS22315	0.27	+0.4
4,827,128	-		DZA65_RS22315	0.27	-0.2
4,827,128	-		DZA65_RS22315	0.27	+0.6
4,827,140	+		DZA65_RS22315	0.30	+1.6
4,827,140	+		DZA65_RS22315	0.30	-1.0
4,827,140	+		DZA65_RS22315	0.30	-1.1
4,827,140	+		DZA65_RS22315	0.30	-0.7
4,827,140	+		DZA65_RS22315	0.30	-0.0
4,827,140	+		DZA65_RS22315	0.30	+1.6
4,827,141	-		DZA65_RS22315	0.30	+0.7
4,827,141	-		DZA65_RS22315	0.30	-1.3
4,827,141	-		DZA65_RS22315	0.30	-2.2
4,827,141	-		DZA65_RS22315	0.30	-0.4
4,827,141	-		DZA65_RS22315	0.30	-1.3
4,827,141	-		DZA65_RS22315	0.30	-2.8
4,827,141	-		DZA65_RS22315	0.30	+0.6
4,827,141	-		DZA65_RS22315	0.30	+1.0
4,827,141	-		DZA65_RS22315	0.30	-1.3
4,827,143	+		DZA65_RS22315	0.30	-1.5
4,827,143	+		DZA65_RS22315	0.30	+1.1
4,827,143	+		DZA65_RS22315	0.30	-0.3
4,827,143	+		DZA65_RS22315	0.30	+0.8
4,827,143	+		DZA65_RS22315	0.30	-0.7
4,827,143	+		DZA65_RS22315	0.30	+1.0
4,827,143	+		DZA65_RS22315	0.30	-0.0
4,827,143	+				-0.0
4,827,144	-		DZA65_RS22315	0.31	-0.0
4,827,144	-		DZA65_RS22315	0.31	-0.5
4,827,144	-		DZA65_RS22315	0.31	-1.1
4,827,144	-		DZA65_RS22315	0.31	+1.0
4,827,171	+		DZA65_RS22315	0.37	-0.2
4,827,171	+		DZA65_RS22315	0.37	+0.1
4,827,171	+		DZA65_RS22315	0.37	-0.9
4,827,171	+		DZA65_RS22315	0.37	-2.0
4,827,172	-		DZA65_RS22315	0.37	-2.0
4,827,184	-		DZA65_RS22315	0.40	+0.4
4,827,203	+		DZA65_RS22315	0.45	-1.1
4,827,204	-		DZA65_RS22315	0.45	+1.6
4,827,204	-		DZA65_RS22315	0.45	-0.0
4,827,204	-		DZA65_RS22315	0.45	-0.2
4,827,204	-		DZA65_RS22315	0.45	-1.0
4,827,204	-		DZA65_RS22315	0.45	-0.2
4,827,296	+		DZA65_RS22315	0.67	-0.9
4,827,296	+		DZA65_RS22315	0.67	+0.2
4,827,297	-		DZA65_RS22315	0.67	-1.3
4,827,297	-		DZA65_RS22315	0.67	-1.0
4,827,374	+		DZA65_RS22315	0.85	-1.0
4,827,374	+		DZA65_RS22315	0.85	-0.3
4,827,374	+		DZA65_RS22315	0.85	+0.6
4,827,374	+		DZA65_RS22315	0.85	-0.3
4,827,375	-		DZA65_RS22315	0.86	-1.2
4,827,375	-		DZA65_RS22315	0.86	-2.7
4,827,405	-				+0.1
4,827,413	+				-0.7
4,827,414	-				-1.8
4,827,414	-				-1.3
4,827,417	+				-0.3
4,827,417	+				-0.6
4,827,417	+				-0.2
4,827,417	+				+0.4
4,827,417	+				+0.8
4,827,417	+				+1.0
4,827,417	+				+0.1
4,827,417	+				-0.6
4,827,417	+				-0.2
4,827,417	+				-0.0
4,827,417	+				+1.0
4,827,418	-				-1.0
4,827,418	-				+0.7
4,827,418	-				-0.8
4,827,418	-				-0.2
4,827,418	-				-0.4
4,827,418	-				-1.5
4,827,418	-				-0.3
4,827,418	-				-0.8
4,827,418	-				-1.0
4,827,418	-				-0.2
4,827,418	-				+0.5
4,827,418	-				+0.4
4,827,439	-				-0.4
4,827,439	-				-0.0
4,827,439	-				-0.5
4,827,442	+				-0.0
4,827,442	+				+1.6
4,827,443	-				+0.4
4,827,443	-				-1.6
4,827,443	-				+0.8
4,827,443	-				+0.1
4,827,470	-				+2.8
4,827,470	-				+1.0
4,827,470	-				+1.3
4,827,480	+				+1.0
4,827,508	+				+0.2
4,827,564	-				-0.3
4,827,568	+				-0.0
4,827,568	+				-0.2
4,827,576	+				+1.3
4,827,577	-				-0.9
4,827,643	+				+0.2
4,827,643	+				+0.8
4,827,643	+				+0.2
4,827,643	+				+0.4
4,827,643	+				+0.1
4,827,644	-				-0.0
4,827,689	+		DZA65_RS22320	0.12	-0.5
4,827,689	+		DZA65_RS22320	0.12	-0.6
4,827,689	+		DZA65_RS22320	0.12	-0.6
4,827,689	+		DZA65_RS22320	0.12	-0.3
4,827,690	-		DZA65_RS22320	0.12	+0.4
4,827,690	-		DZA65_RS22320	0.12	-0.4
4,827,690	-		DZA65_RS22320	0.12	-0.7
4,827,713	+		DZA65_RS22320	0.17	-1.3
4,827,713	+		DZA65_RS22320	0.17	-0.0
4,827,714	-		DZA65_RS22320	0.18	-0.6
4,827,714	-		DZA65_RS22320	0.18	+0.2
4,827,714	-		DZA65_RS22320	0.18	+2.6
4,827,721	-		DZA65_RS22320	0.19	-0.4
4,827,774	+		DZA65_RS22320	0.32	-0.3
4,827,774	+		DZA65_RS22320	0.32	-0.6
4,827,775	-		DZA65_RS22320	0.33	-0.3
4,827,775	-		DZA65_RS22320	0.33	-0.0
4,827,808	+		DZA65_RS22320	0.41	-0.7
4,827,808	+		DZA65_RS22320	0.41	+0.6
4,827,809	-		DZA65_RS22320	0.41	+0.6
4,827,809	-		DZA65_RS22320	0.41	-2.2
4,827,809	-		DZA65_RS22320	0.41	+1.2
4,827,836	+		DZA65_RS22320	0.48	-1.0
4,827,836	+		DZA65_RS22320	0.48	-1.0
4,827,836	+		DZA65_RS22320	0.48	-1.8
4,827,836	+		DZA65_RS22320	0.48	-0.1
4,827,836	+		DZA65_RS22320	0.48	+0.4
4,827,836	+		DZA65_RS22320	0.48	-0.7
4,827,836	+		DZA65_RS22320	0.48	-0.1
4,827,836	+		DZA65_RS22320	0.48	+1.0
4,827,836	+		DZA65_RS22320	0.48	-0.2
4,827,837	-		DZA65_RS22320	0.48	-1.0
4,827,837	-		DZA65_RS22320	0.48	+0.4
4,827,837	-		DZA65_RS22320	0.48	+0.5
4,827,837	-		DZA65_RS22320	0.48	-0.3
4,827,837	-		DZA65_RS22320	0.48	+0.3
4,827,837	-		DZA65_RS22320	0.48	+0.1
4,827,837	-		DZA65_RS22320	0.48	-0.9
4,827,837	-		DZA65_RS22320	0.48	+1.0
4,827,837	-		DZA65_RS22320	0.48	-0.9
4,827,837	-		DZA65_RS22320	0.48	+0.6
4,827,840	-		DZA65_RS22320	0.49	-2.0
4,827,840	-		DZA65_RS22320	0.49	+1.0
4,827,872	+		DZA65_RS22320	0.56	+1.0
4,827,872	+		DZA65_RS22320	0.56	-0.4
4,827,873	-		DZA65_RS22320	0.57	-0.6
4,827,873	-		DZA65_RS22320	0.57	-0.4
4,827,929	+		DZA65_RS22320	0.70	+0.4
4,827,930	-		DZA65_RS22320	0.71	-0.6
4,827,994	+		DZA65_RS22320	0.86	-1.1
4,827,994	+		DZA65_RS22320	0.86	-0.6
4,827,995	-		DZA65_RS22320	0.87	-1.3
4,827,995	-		DZA65_RS22320	0.87	-0.1
4,827,995	-		DZA65_RS22320	0.87	-0.3
4,828,011	+				-0.3
4,828,011	+				-1.0
4,828,011	+				-0.6
4,828,012	-				-0.4
4,828,032	+				-0.0
4,828,032	+				-0.8
4,828,032	+				+0.2
4,828,032	+				+0.2
4,828,033	-				-0.3
4,828,033	-				-1.8
4,828,033	-				-1.6
4,828,033	-				-0.2
4,828,033	-				-2.2
4,828,033	-				-0.1
4,828,033	-				+0.1
4,828,033	-				+0.4
4,828,067	+				-0.8
4,828,067	+				-0.8
4,828,067	+				-0.0
4,828,067	+				-0.6
4,828,067	+				-1.0
4,828,067	+				-1.6
4,828,067	+				-2.3
4,828,067	+				+1.0
4,828,067	+				-0.6
4,828,067	+				+0.3
4,828,067	+				-0.4
4,828,067	+				-0.9
4,828,067	+				-0.4
4,828,067	+				-0.6
4,828,067	+				-0.9
4,828,068	-				-1.0
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