Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09865

Experiment: 3.75mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3.75mM_PTB
2,078,865	-				+0.4
2,078,866	+				+0.2
2,078,866	+				+0.2
2,078,866	+				+0.7
2,078,866	+				+1.0
2,078,866	+				-1.4
2,078,866	+				-0.0
2,078,866	+				+0.6
2,078,866	+				+0.1
2,078,866	+				-0.0
2,078,867	-		DZA65_RS09860	0.10	-1.0
2,078,867	-		DZA65_RS09860	0.10	-0.5
2,078,867	-		DZA65_RS09860	0.10	-0.0
2,078,867	-		DZA65_RS09860	0.10	+0.3
2,078,867	-		DZA65_RS09860	0.10	+0.6
2,078,867	-				+3.0
2,078,883	-		DZA65_RS09860	0.12	-1.0
2,078,891	+		DZA65_RS09860	0.12	+1.0
2,078,892	-				-0.6
2,078,892	-		DZA65_RS09860	0.12	+0.3
2,079,077	+		DZA65_RS09860	0.31	-0.7
2,079,077	+		DZA65_RS09860	0.31	+2.2
2,079,077	+		DZA65_RS09860	0.31	+0.2
2,079,118	-		DZA65_RS09860	0.35	+0.6
2,079,118	-		DZA65_RS09860	0.35	+1.0
2,079,118	-		DZA65_RS09860	0.35	+2.0
2,079,128	+		DZA65_RS09860	0.36	-0.8
2,079,128	+		DZA65_RS09860	0.36	-1.0
2,079,128	+		DZA65_RS09860	0.36	-0.0
2,079,128	+		DZA65_RS09860	0.36	+0.4
2,079,128	+		DZA65_RS09860	0.36	-0.2
2,079,128	+		DZA65_RS09860	0.36	-0.1
2,079,128	+		DZA65_RS09860	0.36	+0.1
2,079,128	+		DZA65_RS09860	0.36	-0.0
2,079,128	+		DZA65_RS09860	0.36	+0.0
2,079,129	-				-1.6
2,079,129	-		DZA65_RS09860	0.36	+0.8
2,079,129	-		DZA65_RS09860	0.36	-1.0
2,079,129	-		DZA65_RS09860	0.36	-0.4
2,079,129	-		DZA65_RS09860	0.36	-1.6
2,079,129	-		DZA65_RS09860	0.36	+0.5
2,079,130	+		DZA65_RS09860	0.36	-0.4
2,079,130	+		DZA65_RS09860	0.36	+0.4
2,079,130	+		DZA65_RS09860	0.36	+0.5
2,079,130	+		DZA65_RS09860	0.36	-0.6
2,079,130	+		DZA65_RS09860	0.36	-0.2
2,079,130	+		DZA65_RS09860	0.36	-0.6
2,079,130	+		DZA65_RS09860	0.36	-0.0
2,079,130	+		DZA65_RS09860	0.36	+0.4
2,079,130	+		DZA65_RS09860	0.36	+0.6
2,079,130	+		DZA65_RS09860	0.36	-0.0
2,079,130	+		DZA65_RS09860	0.36	-1.0
2,079,130	+		DZA65_RS09860	0.36	+0.8
2,079,130	+		DZA65_RS09860	0.36	+0.7
2,079,130	+		DZA65_RS09860	0.36	-1.2
2,079,131	-		DZA65_RS09860	0.36	+0.3
2,079,131	-		DZA65_RS09860	0.36	+1.7
2,079,131	-		DZA65_RS09860	0.36	-1.1
2,079,131	-		DZA65_RS09860	0.36	-0.3
2,079,131	-		DZA65_RS09860	0.36	-0.1
2,079,131	-		DZA65_RS09860	0.36	-0.0
2,079,131	-		DZA65_RS09860	0.36	-1.0
2,079,131	-		DZA65_RS09860	0.36	-0.8
2,079,131	-		DZA65_RS09860	0.36	-0.0
2,079,131	-		DZA65_RS09860	0.36	-0.0
2,079,131	-		DZA65_RS09860	0.36	+1.2
2,079,131	-		DZA65_RS09860	0.36	+1.3
2,079,131	-		DZA65_RS09860	0.36	-0.3
2,079,131	-		DZA65_RS09860	0.36	+0.1
2,079,131	-		DZA65_RS09860	0.36	-0.3
2,079,405	-		DZA65_RS09860	0.63	+1.6
2,079,434	-		DZA65_RS09860	0.66	-0.3
2,079,494	-		DZA65_RS09860	0.72	+2.0
2,079,494	-		DZA65_RS09860	0.72	-1.0
2,079,494	-		DZA65_RS09860	0.72	+1.2
2,079,555	+		DZA65_RS09860	0.78	+0.3
2,079,556	-		DZA65_RS09860	0.78	+0.3
2,079,556	-		DZA65_RS09860	0.78	+0.6
2,079,602	+		DZA65_RS09860	0.83	-0.5
2,079,603	-		DZA65_RS09860	0.83	-1.2
2,079,603	-		DZA65_RS09860	0.83	+0.6
2,079,603	-		DZA65_RS09860	0.83	+0.6
2,079,604	+		DZA65_RS09860	0.83	-1.6
2,079,604	+		DZA65_RS09860	0.83	-0.3
2,079,604	+		DZA65_RS09860	0.83	+0.8
2,079,605	-		DZA65_RS09860	0.83	+0.6
2,079,605	-		DZA65_RS09860	0.83	+1.0
2,079,605	-		DZA65_RS09860	0.83	+1.0
2,079,605	-		DZA65_RS09860	0.83	-0.2
2,079,650	-		DZA65_RS09860	0.88	+0.4
2,079,732	+				-0.9
2,079,732	+				+1.0
2,079,732	+				-0.0
2,079,732	+				+1.0
2,079,732	+				-0.9
2,079,733	-				+1.3
2,079,733	-				-1.6
2,079,733	-				+0.3
2,079,733	-				+1.0
2,079,787	-				-1.0
2,079,787	-				-0.4
2,079,955	+				-1.2
2,079,955	+				+2.1
2,079,959	+				+0.5
2,079,959	+				+0.2
2,080,102	+		DZA65_RS09865	0.16	+0.7
2,080,169	+		DZA65_RS09865	0.20	+0.6
2,080,181	-		DZA65_RS09865	0.21	-0.6
2,080,185	-		DZA65_RS09865	0.21	-0.5
2,080,243	+		DZA65_RS09865	0.25	-0.0
2,080,243	+		DZA65_RS09865	0.25	+2.6
2,080,243	+		DZA65_RS09865	0.25	+1.6
2,080,244	-		DZA65_RS09865	0.25	-1.6
2,080,244	-		DZA65_RS09865	0.25	-1.0
2,080,244	-		DZA65_RS09865	0.25	-0.7
2,080,246	+		DZA65_RS09865	0.25	-1.3
2,080,246	+		DZA65_RS09865	0.25	+2.3
2,080,246	+		DZA65_RS09865	0.25	-0.6
2,080,246	+		DZA65_RS09865	0.25	-1.3
2,080,246	+		DZA65_RS09865	0.25	-0.0
2,080,246	+		DZA65_RS09865	0.25	-1.3
2,080,246	+		DZA65_RS09865	0.25	+0.1
2,080,247	-		DZA65_RS09865	0.25	+0.5
2,080,247	-		DZA65_RS09865	0.25	-0.0
2,080,247	-		DZA65_RS09865	0.25	-1.2
2,080,247	-		DZA65_RS09865	0.25	-0.6
2,080,247	-		DZA65_RS09865	0.25	-0.0
2,080,247	-		DZA65_RS09865	0.25	+0.4
2,080,396	+		DZA65_RS09865	0.34	-1.1
2,080,397	-		DZA65_RS09865	0.34	+0.6
2,080,397	-		DZA65_RS09865	0.34	+0.8
2,080,499	+		DZA65_RS09865	0.40	-1.2
2,080,500	-		DZA65_RS09865	0.40	-0.2
2,080,500	-		DZA65_RS09865	0.40	-1.0
2,080,500	-		DZA65_RS09865	0.40	-0.2
2,080,508	+		DZA65_RS09865	0.41	+1.0
2,080,509	-		DZA65_RS09865	0.41	+0.4
2,080,509	-		DZA65_RS09865	0.41	-0.6
2,080,510	+		DZA65_RS09865	0.41	-1.2
2,080,510	+		DZA65_RS09865	0.41	+0.3
2,080,510	+		DZA65_RS09865	0.41	+0.4
2,080,511	-		DZA65_RS09865	0.41	-0.6
2,080,511	-		DZA65_RS09865	0.41	+1.0
2,080,511	-		DZA65_RS09865	0.41	+0.3
2,080,511	-		DZA65_RS09865	0.41	+0.7
2,080,609	+		DZA65_RS09865	0.47	+0.3
2,080,609	+		DZA65_RS09865	0.47	+1.0
2,080,610	-		DZA65_RS09865	0.47	+0.4
2,080,610	-		DZA65_RS09865	0.47	+0.1
2,080,614	-		DZA65_RS09865	0.47	-0.0
2,080,614	-		DZA65_RS09865	0.47	-0.0
2,080,681	+		DZA65_RS09865	0.51	-1.1
2,080,681	+		DZA65_RS09865	0.51	-0.2
2,080,681	+		DZA65_RS09865	0.51	+0.3
2,080,681	+		DZA65_RS09865	0.51	-0.5
2,080,681	+		DZA65_RS09865	0.51	+0.3
2,080,681	+				-0.0
2,080,681	+		DZA65_RS09865	0.51	+1.0
2,080,681	+				-0.3
2,080,681	+		DZA65_RS09865	0.51	+0.4
2,080,681	+		DZA65_RS09865	0.51	-1.5
2,080,681	+		DZA65_RS09865	0.51	+1.3
2,080,681	+		DZA65_RS09865	0.51	-0.0
2,080,681	+		DZA65_RS09865	0.51	+0.4
2,080,681	+		DZA65_RS09865	0.51	+0.7
2,080,681	+		DZA65_RS09865	0.51	+0.1
2,080,682	-		DZA65_RS09865	0.51	+0.5
2,080,682	-		DZA65_RS09865	0.51	-0.3
2,080,682	-		DZA65_RS09865	0.51	+1.3
2,080,682	-		DZA65_RS09865	0.51	-0.4
2,080,682	-		DZA65_RS09865	0.51	-0.0
2,080,682	-		DZA65_RS09865	0.51	-0.6
2,080,682	-		DZA65_RS09865	0.51	+1.3
2,080,682	-		DZA65_RS09865	0.51	-0.3
2,080,682	-		DZA65_RS09865	0.51	-0.8
2,080,682	-		DZA65_RS09865	0.51	+0.6
2,080,682	-		DZA65_RS09865	0.51	+0.6
2,080,682	-		DZA65_RS09865	0.51	-0.1
2,080,682	-		DZA65_RS09865	0.51	+1.3
2,080,682	-		DZA65_RS09865	0.51	+0.1
2,080,682	-		DZA65_RS09865	0.51	+0.4
2,080,682	-		DZA65_RS09865	0.51	-0.8
2,080,685	+		DZA65_RS09865	0.51	-1.3
2,080,685	+		DZA65_RS09865	0.51	+1.0
2,080,685	+		DZA65_RS09865	0.51	+1.4
2,080,685	+		DZA65_RS09865	0.51	-0.0
2,080,686	-		DZA65_RS09865	0.52	-0.0
2,080,686	-		DZA65_RS09865	0.52	-0.2
2,080,686	-		DZA65_RS09865	0.52	-1.9
2,080,721	+		DZA65_RS09865	0.54	+1.0
2,080,721	+		DZA65_RS09865	0.54	-1.3
2,080,722	-		DZA65_RS09865	0.54	-0.0
2,080,722	-		DZA65_RS09865	0.54	+1.2
2,080,722	-		DZA65_RS09865	0.54	-1.3
2,080,722	-		DZA65_RS09865	0.54	-0.7
2,080,722	-		DZA65_RS09865	0.54	-1.6
2,080,779	+		DZA65_RS09865	0.57	+0.6
2,080,779	+		DZA65_RS09865	0.57	-1.0
2,080,779	+		DZA65_RS09865	0.57	+0.4
2,080,779	+		DZA65_RS09865	0.57	+1.4
2,080,779	+		DZA65_RS09865	0.57	-0.0
2,080,780	-		DZA65_RS09865	0.57	-2.2
2,080,780	-		DZA65_RS09865	0.57	-1.2
2,080,780	-		DZA65_RS09865	0.57	+0.4
2,080,780	-		DZA65_RS09865	0.57	-0.8
2,080,780	-		DZA65_RS09865	0.57	-0.7
2,080,780	-		DZA65_RS09865	0.57	-0.0
2,080,928	+		DZA65_RS09865	0.66	+0.7
2,080,928	+		DZA65_RS09865	0.66	+1.0
2,080,929	-		DZA65_RS09865	0.66	-0.3
2,080,939	+		DZA65_RS09865	0.67	-0.6
2,080,939	+		DZA65_RS09865	0.67	-0.6
2,080,940	-		DZA65_RS09865	0.67	+0.6
2,080,948	+		DZA65_RS09865	0.67	-0.4
2,080,948	+		DZA65_RS09865	0.67	+1.4
2,080,948	+		DZA65_RS09865	0.67	-1.3
2,080,948	+		DZA65_RS09865	0.67	+1.3
2,080,948	+		DZA65_RS09865	0.67	+1.4
2,080,948	+		DZA65_RS09865	0.67	+0.8
2,080,949	-		DZA65_RS09865	0.67	+0.3
2,080,950	+		DZA65_RS09865	0.68	-1.8
2,080,950	+		DZA65_RS09865	0.68	+0.3
2,080,950	+		DZA65_RS09865	0.68	-1.6
2,080,951	-		DZA65_RS09865	0.68	-0.1
2,080,951	-		DZA65_RS09865	0.68	-0.5
2,080,951	-		DZA65_RS09865	0.68	-0.1
2,080,991	+		DZA65_RS09865	0.70	+1.6
2,080,991	+		DZA65_RS09865	0.70	-0.0
2,080,991	+		DZA65_RS09865	0.70	+0.7
2,080,991	+		DZA65_RS09865	0.70	-0.8
2,080,991	+		DZA65_RS09865	0.70	-1.0
2,080,992	-		DZA65_RS09865	0.70	+1.4
2,080,992	-		DZA65_RS09865	0.70	-0.0
2,080,992	-		DZA65_RS09865	0.70	+0.6
2,080,992	-		DZA65_RS09865	0.70	-0.4
2,080,993	+		DZA65_RS09865	0.70	+2.0
2,080,993	+		DZA65_RS09865	0.70	+0.6
2,080,993	+		DZA65_RS09865	0.70	-1.0
2,080,993	+		DZA65_RS09865	0.70	-0.3
2,080,993	+		DZA65_RS09865	0.70	-1.6
2,080,994	-		DZA65_RS09865	0.70	-1.3
2,080,994	-		DZA65_RS09865	0.70	+0.5
2,080,994	-		DZA65_RS09865	0.70	+1.0
2,080,994	-		DZA65_RS09865	0.70	-0.0
2,080,994	-		DZA65_RS09865	0.70	+0.7
2,080,994	-		DZA65_RS09865	0.70	+1.6
2,081,018	-				+1.0
2,081,018	-		DZA65_RS09865	0.72	+0.8
2,081,030	+		DZA65_RS09865	0.72	-0.6
2,081,030	+		DZA65_RS09865	0.72	-0.3
2,081,030	+		DZA65_RS09865	0.72	-1.6
2,081,030	+		DZA65_RS09865	0.72	+1.7
2,081,031	-		DZA65_RS09865	0.72	-0.3
2,081,031	-		DZA65_RS09865	0.72	+0.6
2,081,066	+		DZA65_RS09865	0.75	+0.3
2,081,073	-		DZA65_RS09865	0.75	-2.2
2,081,073	-		DZA65_RS09865	0.75	-0.3
2,081,256	-		DZA65_RS09865	0.86	+0.6
2,081,364	+				-0.0
2,081,365	-				-1.8
2,081,428	+				-0.2
2,081,482	+				-1.0
2,081,482	+				-0.0
2,081,482	+				+0.6
2,081,482	+				+0.3
2,081,482	+				+0.7
2,081,482	+				-2.0
2,081,482	+				-0.0
2,081,482	+				+1.6
2,081,482	+				-0.3
2,081,483	-				-0.7
2,081,483	-				-0.0
2,081,483	-				-0.0
2,081,483	-				+0.2
2,081,483	-				-0.0
2,081,483	-				-0.6
2,081,483	-				+0.4
2,081,483	-				-2.2
2,081,483	-				+0.1
2,081,483	-				-1.0
2,081,483	-				-0.4
2,081,486	+				+0.7
2,081,487	-				-0.2
2,081,487	-				+1.0
2,081,487	-				-0.6
2,081,535	+				-1.3
2,081,535	+				-1.0
2,081,535	+				+0.3
2,081,536	-				-0.0
2,081,536	-				-0.9
2,081,555	+				-0.0
2,081,556	-				-0.0
2,081,556	-				+1.0
2,081,556	-				+0.3
2,081,556	-				-0.1
2,081,569	-				-1.3
2,081,569	-				-0.6
2,081,570	+				-0.2
2,081,641	+				-0.4
2,081,642	-				+0.5
2,081,647	+				-1.3
2,081,674	+				-0.6
2,081,674	+				-0.0
2,081,675	-				-2.9
2,081,744	-				-0.3
2,081,744	-				+1.0
2,082,165	+		DZA65_RS09870	0.26	-0.6
2,082,398	-		DZA65_RS09870	0.40	-0.3
2,082,486	+		DZA65_RS09870	0.45	-0.7