Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08575

Experiment: 3.75mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3.75mM_PTB
1,808,863	+		DZA65_RS08565	0.68	-0.1
1,808,888	+		DZA65_RS08565	0.70	-0.6
1,808,889	-		DZA65_RS08565	0.70	+0.2
1,808,924	-		DZA65_RS08565	0.73	-0.6
1,808,924	-		DZA65_RS08565	0.73	+0.0
1,808,974	+		DZA65_RS08565	0.77	+0.2
1,808,974	+		DZA65_RS08565	0.77	+1.7
1,808,974	+		DZA65_RS08565	0.77	-0.2
1,808,975	-		DZA65_RS08565	0.77	-0.6
1,808,975	-		DZA65_RS08565	0.77	-0.7
1,808,977	+		DZA65_RS08565	0.77	-0.6
1,808,977	+		DZA65_RS08565	0.77	-0.0
1,808,977	+		DZA65_RS08565	0.77	-0.3
1,808,977	+		DZA65_RS08565	0.77	-0.8
1,808,977	+		DZA65_RS08565	0.77	-0.3
1,808,977	+		DZA65_RS08565	0.77	-0.6
1,808,978	-				-2.2
1,808,978	-		DZA65_RS08565	0.78	-0.5
1,808,978	-		DZA65_RS08565	0.78	-0.6
1,808,978	-		DZA65_RS08565	0.78	+2.0
1,808,978	-		DZA65_RS08565	0.78	-1.2
1,809,134	+				+0.4
1,809,134	+				+0.6
1,809,134	+				+1.6
1,809,134	+				-1.6
1,809,134	+				+0.8
1,809,134	+				-0.4
1,809,134	+				-0.3
1,809,134	+				-0.4
1,809,134	+				-1.1
1,809,134	+				-0.9
1,809,135	-				+0.4
1,809,135	-				+0.7
1,809,135	-				-1.0
1,809,135	-				+0.0
1,809,135	-				-1.8
1,809,135	-				+0.3
1,809,135	-				+0.4
1,809,135	-				-1.0
1,809,135	-				+0.2
1,809,143	+				-0.4
1,809,143	+				-0.6
1,809,143	+				+1.4
1,809,143	+				+0.5
1,809,144	-				+0.0
1,809,144	-				+0.0
1,809,144	-				-1.6
1,809,144	-				+0.2
1,809,144	-				+0.1
1,809,144	-				+0.6
1,809,147	-				+0.0
1,809,203	+				-0.4
1,809,204	-				-0.5
1,809,204	-				+0.4
1,809,204	-				-1.3
1,809,204	-				+1.3
1,809,204	-				-0.6
1,809,204	-				+0.2
1,809,215	+				+0.6
1,809,215	+				+0.3
1,809,215	+				-1.8
1,809,216	-				+0.0
1,809,251	+				+1.2
1,809,251	+				+1.7
1,809,251	+				-1.8
1,809,251	+				+0.7
1,809,252	-				+1.0
1,809,266	+				-1.3
1,809,361	-		DZA65_RS08570	0.20	+0.6
1,809,559	+		DZA65_RS08570	0.57	+0.4
1,809,560	-		DZA65_RS08570	0.57	-0.6
1,809,560	-		DZA65_RS08570	0.57	+1.3
1,809,577	+		DZA65_RS08570	0.60	+1.3
1,809,577	+		DZA65_RS08570	0.60	-1.3
1,809,577	+		DZA65_RS08570	0.60	-0.6
1,809,577	+		DZA65_RS08570	0.60	-0.6
1,809,577	+		DZA65_RS08570	0.60	-0.5
1,809,577	+		DZA65_RS08570	0.60	-1.8
1,809,578	-		DZA65_RS08570	0.61	-0.1
1,809,578	-		DZA65_RS08570	0.61	-1.3
1,809,578	-		DZA65_RS08570	0.61	-1.0
1,809,604	+		DZA65_RS08570	0.65	+0.0
1,809,640	+		DZA65_RS08570	0.72	-0.3
1,809,640	+		DZA65_RS08570	0.72	-0.2
1,809,640	+		DZA65_RS08570	0.72	+2.0
1,809,640	+		DZA65_RS08570	0.72	-0.0
1,809,640	+		DZA65_RS08570	0.72	-0.5
1,809,640	+		DZA65_RS08570	0.72	+0.5
1,809,640	+		DZA65_RS08570	0.72	-0.7
1,809,640	+		DZA65_RS08570	0.72	-0.6
1,809,640	+		DZA65_RS08570	0.72	-0.4
1,809,640	+		DZA65_RS08570	0.72	-0.2
1,809,641	-		DZA65_RS08570	0.72	+0.0
1,809,641	-		DZA65_RS08570	0.72	+2.0
1,809,641	-		DZA65_RS08570	0.72	-1.0
1,809,641	-		DZA65_RS08570	0.72	+0.4
1,809,641	-		DZA65_RS08570	0.72	+1.2
1,809,641	-		DZA65_RS08570	0.72	-1.6
1,809,641	-		DZA65_RS08570	0.72	+1.4
1,809,641	-		DZA65_RS08570	0.72	+0.4
1,809,661	+		DZA65_RS08570	0.76	-1.0
1,809,661	+		DZA65_RS08570	0.76	+0.3
1,809,661	+		DZA65_RS08570	0.76	+0.4
1,809,661	+		DZA65_RS08570	0.76	+0.0
1,809,662	-		DZA65_RS08570	0.76	+1.0
1,809,662	-		DZA65_RS08570	0.76	-1.4
1,809,662	-		DZA65_RS08570	0.76	+1.0
1,809,662	-				-1.2
1,809,724	+		DZA65_RS08570	0.88	+0.2
1,809,724	+		DZA65_RS08570	0.88	-1.2
1,809,724	+		DZA65_RS08570	0.88	+2.3
1,809,725	-		DZA65_RS08570	0.88	-0.1
1,809,725	-		DZA65_RS08570	0.88	+0.4
1,809,725	-		DZA65_RS08570	0.88	+0.2
1,809,725	-		DZA65_RS08570	0.88	-1.0
1,809,725	-		DZA65_RS08570	0.88	+0.0
1,809,787	+				-0.7
1,809,787	+				-0.1
1,809,787	+				+0.0
1,809,787	+				+0.4
1,809,788	-				+1.0
1,809,791	+				+0.7
1,809,791	+				-0.6
1,809,791	+				-0.5
1,809,791	+				+0.6
1,809,791	+				-0.6
1,809,791	+				-0.3
1,809,791	+				+1.0
1,809,791	+				-0.3
1,809,791	+				-2.1
1,809,792	-				-2.6
1,809,792	-				+0.2
1,809,792	-				-0.6
1,809,792	-				+0.6
1,809,792	-				+0.4
1,809,792	-				+1.7
1,809,792	-				+1.4
1,809,792	-				-0.6
1,809,812	+				-0.5
1,809,877	-				-0.6
1,809,912	+				+2.0
1,809,918	+				+0.2
1,809,951	+		DZA65_RS08575	0.12	-1.0
1,809,951	+		DZA65_RS08575	0.12	-0.8
1,809,951	+		DZA65_RS08575	0.12	-1.0
1,809,951	+		DZA65_RS08575	0.12	-0.2
1,809,952	-		DZA65_RS08575	0.12	-0.6
1,809,952	-		DZA65_RS08575	0.12	-2.6
1,809,956	+		DZA65_RS08575	0.12	+0.0
1,809,956	+		DZA65_RS08575	0.12	+0.2
1,809,956	+		DZA65_RS08575	0.12	-0.7
1,809,957	-		DZA65_RS08575	0.12	+1.7
1,809,979	+		DZA65_RS08575	0.14	-0.7
1,810,012	+		DZA65_RS08575	0.16	-0.7
1,810,013	-		DZA65_RS08575	0.17	-1.6
1,810,089	+		DZA65_RS08575	0.22	+0.7
1,810,089	+				+1.0
1,810,089	+		DZA65_RS08575	0.22	-0.6
1,810,089	+		DZA65_RS08575	0.22	+0.0
1,810,090	-		DZA65_RS08575	0.22	+1.0
1,810,090	-		DZA65_RS08575	0.22	+0.0
1,810,090	-		DZA65_RS08575	0.22	-0.7
1,810,278	+		DZA65_RS08575	0.36	+1.0
1,810,279	-		DZA65_RS08575	0.36	+1.7
1,810,343	+		DZA65_RS08575	0.41	-1.7
1,810,343	+		DZA65_RS08575	0.41	-2.0
1,810,350	-		DZA65_RS08575	0.42	-0.6
1,810,361	+		DZA65_RS08575	0.43	+1.0
1,810,362	-		DZA65_RS08575	0.43	-0.4
1,810,362	-		DZA65_RS08575	0.43	+0.4
1,810,717	+		DZA65_RS08575	0.69	+0.3
1,810,771	-		DZA65_RS08575	0.73	+0.1
1,810,847	+		DZA65_RS08575	0.79	+0.0
1,810,999	-				-2.5
1,811,004	+				+0.0
1,811,004	+				-0.2
1,811,004	+				+1.0
1,811,004	+				+1.0
1,811,004	+				-0.7
1,811,004	+				-0.6
1,811,005	-				+1.0
1,811,005	-				+0.2
1,811,005	-				+0.2
1,811,005	-				+0.1
1,811,127	+				+0.0
1,811,127	+				+0.3
1,811,127	+				+0.0
1,811,128	-				+0.0
1,811,128	-				-0.5
1,811,132	-				-0.7
1,811,132	-				-0.6
1,811,132	-				+1.3
1,811,132	-				-1.3
1,811,191	+				-1.0
1,811,191	+				-0.8
1,811,191	+				-1.6
1,811,191	+				+0.5
1,811,191	+				+0.0
1,811,191	+				-0.6
1,811,192	-				-0.2
1,811,192	-				+0.4
1,811,192	-				-2.2
1,811,192	-				+0.3
1,811,192	-				+0.0
1,811,192	-				+0.3
1,811,324	-		DZA65_RS08580	0.23	+0.3
1,811,344	+		DZA65_RS08580	0.25	-0.7
1,811,344	+		DZA65_RS08580	0.25	+1.0
1,811,344	+		DZA65_RS08580	0.25	-0.6
1,811,345	-		DZA65_RS08580	0.26	+1.0
1,811,345	-		DZA65_RS08580	0.26	+2.0
1,811,345	-		DZA65_RS08580	0.26	+1.0
1,811,431	+		DZA65_RS08580	0.37	+3.0
1,811,432	-		DZA65_RS08580	0.37	-0.4
1,811,442	+		DZA65_RS08580	0.38	+0.9
1,811,442	+		DZA65_RS08580	0.38	+1.4
1,811,442	+		DZA65_RS08580	0.38	+0.0
1,811,443	-		DZA65_RS08580	0.38	-0.1
1,811,443	-		DZA65_RS08580	0.38	-1.0
1,811,443	-		DZA65_RS08580	0.38	-1.0
1,811,443	-		DZA65_RS08580	0.38	-0.7
1,811,617	+		DZA65_RS08580	0.61	-1.6
1,811,617	+		DZA65_RS08580	0.61	+0.7
1,811,617	+		DZA65_RS08580	0.61	-1.0
1,811,618	-		DZA65_RS08580	0.61	-1.6
1,811,618	-		DZA65_RS08580	0.61	-0.2
1,811,618	-		DZA65_RS08580	0.61	+0.4
1,811,618	-		DZA65_RS08580	0.61	-1.0
1,811,790	+		DZA65_RS08580	0.83	-1.3
1,811,790	+		DZA65_RS08580	0.83	+0.6
1,811,790	+		DZA65_RS08580	0.83	-0.3
1,811,858	-				-0.6
1,811,863	+				-1.0
1,811,864	-				-0.3
1,811,871	-				+0.3
1,811,912	+				-2.6
1,811,912	+				+0.0
1,811,912	+				-1.0
1,811,912	+				-0.7
1,811,912	+				-0.3
1,811,913	-				+0.0
1,811,915	+				+0.2
1,811,915	+				-0.6
1,811,915	+				+1.0
1,811,916	-				+0.4
1,811,916	-				-0.0
1,811,920	+				-0.6
1,811,920	+				+1.0
1,811,921	-				+0.0
1,811,931	+				-1.3
1,811,931	+				+1.1
1,811,931	+				-0.6
1,811,931	+				-0.6
1,811,931	+				+1.2
1,811,931	+				-1.6
1,811,931	+				-2.0
1,811,932	-				+0.4
1,811,932	-				-1.0
1,811,932	-				-0.3
1,811,932	-				-0.6