Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18080

Experiment: 3.75mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	3.75mM_PTB
3,888,449	+		DZA65_RS18075	0.81	+1.2
3,888,699	-				-1.1
3,888,699	-				+0.7
3,888,700	+				-0.2
3,888,700	+				-0.6
3,888,700	+				-0.6
3,888,701	-				-0.3
3,888,701	-				+0.4
3,888,708	+				-0.3
3,888,708	+				-0.3
3,888,708	+				-0.3
3,888,708	+				+0.5
3,888,708	+				-1.1
3,888,708	+				-0.5
3,888,708	+				-0.8
3,888,708	+				-0.8
3,888,709	-				-0.5
3,888,709	-				+0.7
3,888,709	-				+0.5
3,888,709	-				-0.8
3,888,709	-				-1.8
3,888,709	-				+1.4
3,888,725	+				-0.0
3,888,726	-				-0.6
3,888,728	+				+0.7
3,888,755	+				-1.0
3,888,755	+				+1.3
3,888,756	-				-0.5
3,888,756	-				-1.1
3,888,756	-				-0.3
3,888,756	-				-0.8
3,888,790	+				-0.4
3,888,790	+				+0.7
3,888,790	+				-0.5
3,888,790	+				-0.8
3,888,790	+				-0.7
3,888,791	-				-1.2
3,888,791	-				-0.7
3,888,791	-				+0.1
3,888,791	-				-0.4
3,888,791	-				+0.5
3,888,791	-				-0.5
3,888,793	+				-0.4
3,888,794	-				-0.3
3,888,799	+				+0.5
3,888,799	+				+0.5
3,888,799	+				+0.3
3,888,800	-				-1.3
3,888,800	-				+0.2
3,888,815	+				-1.3
3,888,823	+				-0.8
3,888,823	+				+1.7
3,888,824	-				-0.4
3,888,848	-				+0.4
3,888,872	+				+0.3
3,888,873	-				-0.2
3,888,910	+				+2.6
3,888,910	+				-0.8
3,888,911	-				+0.7
3,888,911	-				+0.6
3,888,942	+				+0.3
3,888,942	+				-0.8
3,888,943	-				+0.7
3,888,945	+				-0.8
3,888,945	+				-0.3
3,888,946	-				-0.2
3,888,946	-				-2.6
3,888,946	-				-0.6
3,888,946	-				-1.3
3,888,946	-				+1.2
3,888,964	+				-1.4
3,888,964	+				-1.6
3,888,964	+				-0.3
3,888,965	-				+0.3
3,888,965	-				-1.3
3,888,987	-				-2.6
3,889,091	+				-0.3
3,889,091	+				-0.2
3,889,092	-				+1.6
3,889,092	-				-0.4
3,889,105	+				+0.3
3,889,105	+				-0.4
3,889,106	-				-1.8
3,889,110	+				-1.1
3,889,110	+				-0.1
3,889,110	+				-1.3
3,889,110	+				+0.2
3,889,111	-				+1.7
3,889,111	-				+0.4
3,889,111	-				-0.7
3,889,111	-				-0.3
3,889,111	-				-1.3
3,889,111	-				+0.1
3,889,111	-				-0.7
3,889,111	-				-0.5
3,889,118	-				-0.3
3,889,118	-				-0.6
3,889,118	-				-0.8
3,889,136	-				-0.8
3,889,150	+				+0.3
3,889,150	+				-0.7
3,889,150	+				-0.1
3,889,151	-				-1.6
3,889,199	+				+0.2
3,889,200	-				-0.5
3,889,200	-				-0.1
3,889,325	-		DZA65_RS18080	0.15	-1.1
3,889,348	+		DZA65_RS18080	0.18	-2.4
3,889,378	+		DZA65_RS18080	0.22	-1.8
3,889,379	-		DZA65_RS18080	0.22	-2.2
3,889,559	-		DZA65_RS18080	0.47	+0.2
3,889,559	-		DZA65_RS18080	0.47	-1.6
3,889,690	+		DZA65_RS18080	0.65	-0.1
3,889,690	+		DZA65_RS18080	0.65	+1.7
3,889,690	+		DZA65_RS18080	0.65	-0.3
3,889,709	-		DZA65_RS18080	0.67	-2.1
3,889,943	+				+0.4
3,889,944	-				+0.7
3,890,001	-				+0.7
3,890,136	-		DZA65_RS18085	0.10	-2.1
3,890,262	-		DZA65_RS18085	0.17	+0.9
3,890,294	+		DZA65_RS18085	0.19	+0.3
3,890,294	+		DZA65_RS18085	0.19	-1.0
3,890,294	+		DZA65_RS18085	0.19	+0.5
3,890,294	+		DZA65_RS18085	0.19	+0.7
3,890,294	+		DZA65_RS18085	0.19	-2.1
3,890,295	-		DZA65_RS18085	0.19	-0.3
3,890,295	-		DZA65_RS18085	0.19	-0.2
3,890,370	+		DZA65_RS18085	0.24	-3.0
3,890,501	+		DZA65_RS18085	0.31	-0.4
3,890,502	-		DZA65_RS18085	0.31	-0.6
3,890,502	-		DZA65_RS18085	0.31	-0.3
3,890,502	-		DZA65_RS18085	0.31	-0.4
3,890,615	+		DZA65_RS18085	0.38	-1.8
3,890,615	+		DZA65_RS18085	0.38	+0.6
3,890,615	+		DZA65_RS18085	0.38	+0.4
3,890,615	+		DZA65_RS18085	0.38	-1.3
3,890,615	+		DZA65_RS18085	0.38	-0.3
3,890,616	-		DZA65_RS18085	0.38	+0.1
3,890,616	-		DZA65_RS18085	0.38	+0.2
3,890,616	-		DZA65_RS18085	0.38	+1.3
3,890,616	-		DZA65_RS18085	0.38	+0.4
3,890,752	+		DZA65_RS18085	0.46	-1.8
3,890,752	+		DZA65_RS18085	0.46	-1.8
3,890,752	+		DZA65_RS18085	0.46	-1.1
3,890,752	+				-2.1
3,890,752	+		DZA65_RS18085	0.46	-0.3
3,890,753	-		DZA65_RS18085	0.46	+2.7
3,890,753	-		DZA65_RS18085	0.46	-0.2
3,890,753	-		DZA65_RS18085	0.46	-1.6
3,890,753	-		DZA65_RS18085	0.46	-0.1
3,890,753	-		DZA65_RS18085	0.46	-1.0
3,890,849	+		DZA65_RS18085	0.52	-0.8
3,890,849	+		DZA65_RS18085	0.52	-1.3
3,890,850	-		DZA65_RS18085	0.52	-0.4
3,890,850	-		DZA65_RS18085	0.52	+0.7
3,890,850	-		DZA65_RS18085	0.52	-0.3
3,890,851	+		DZA65_RS18085	0.52	-1.4
3,890,852	-		DZA65_RS18085	0.52	+2.3
3,890,852	-		DZA65_RS18085	0.52	+1.1
3,890,878	+		DZA65_RS18085	0.53	-2.6
3,890,879	-		DZA65_RS18085	0.53	-1.4
3,890,879	-		DZA65_RS18085	0.53	-1.7
3,890,903	+		DZA65_RS18085	0.55	-0.3
3,890,904	-		DZA65_RS18085	0.55	-0.1
3,890,925	+		DZA65_RS18085	0.56	-0.1
3,890,925	+		DZA65_RS18085	0.56	-0.3
3,890,925	+		DZA65_RS18085	0.56	-0.5
3,890,925	+		DZA65_RS18085	0.56	+0.2
3,890,925	+		DZA65_RS18085	0.56	-0.6
3,890,925	+		DZA65_RS18085	0.56	-0.1
3,890,925	+		DZA65_RS18085	0.56	+0.9
3,890,925	+		DZA65_RS18085	0.56	-0.3
3,890,926	-		DZA65_RS18085	0.56	-2.3
3,890,926	-		DZA65_RS18085	0.56	-0.8
3,890,926	-		DZA65_RS18085	0.56	-0.3
3,890,926	-		DZA65_RS18085	0.56	-0.6
3,890,926	-		DZA65_RS18085	0.56	-0.9
3,890,930	+		DZA65_RS18085	0.56	-1.8
3,890,937	+		DZA65_RS18085	0.57	-1.1
3,890,937	+		DZA65_RS18085	0.57	-1.0