Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21025

Experiment: 1.88mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1.88mM_PTB
4,546,337	+		DZA65_RS21020	0.42	-0.7
4,546,337	+		DZA65_RS21020	0.42	-0.2
4,546,337	+		DZA65_RS21020	0.42	+1.5
4,546,337	+		DZA65_RS21020	0.42	+0.7
4,546,337	+				+0.6
4,546,337	+		DZA65_RS21020	0.42	-0.1
4,546,337	+		DZA65_RS21020	0.42	-0.5
4,546,337	+		DZA65_RS21020	0.42	-0.2
4,546,337	+		DZA65_RS21020	0.42	+0.2
4,546,337	+		DZA65_RS21020	0.42	+0.5
4,546,337	+		DZA65_RS21020	0.42	-1.5
4,546,337	+		DZA65_RS21020	0.42	+0.0
4,546,337	+		DZA65_RS21020	0.42	+0.2
4,546,337	+		DZA65_RS21020	0.42	-0.0
4,546,338	-		DZA65_RS21020	0.42	-2.0
4,546,338	-		DZA65_RS21020	0.42	+0.6
4,546,338	-		DZA65_RS21020	0.42	+0.6
4,546,338	-		DZA65_RS21020	0.42	-0.7
4,546,338	-		DZA65_RS21020	0.42	-0.4
4,546,338	-		DZA65_RS21020	0.42	+0.7
4,546,338	-		DZA65_RS21020	0.42	-0.0
4,546,338	-		DZA65_RS21020	0.42	-0.4
4,546,338	-		DZA65_RS21020	0.42	-0.3
4,546,338	-		DZA65_RS21020	0.42	-0.6
4,546,338	-		DZA65_RS21020	0.42	+2.7
4,546,338	-		DZA65_RS21020	0.42	+0.5
4,546,338	-		DZA65_RS21020	0.42	-0.4
4,546,339	+		DZA65_RS21020	0.42	-1.0
4,546,340	-		DZA65_RS21020	0.42	+0.8
4,546,433	+				-0.4
4,546,457	+		DZA65_RS21020	0.51	+1.2
4,546,457	+		DZA65_RS21020	0.51	-0.6
4,546,457	+		DZA65_RS21020	0.51	-1.2
4,546,457	+		DZA65_RS21020	0.51	+1.1
4,546,458	-		DZA65_RS21020	0.51	-1.2
4,546,458	-		DZA65_RS21020	0.51	+1.2
4,546,460	-		DZA65_RS21020	0.51	-0.3
4,546,460	-		DZA65_RS21020	0.51	+1.2
4,546,508	+		DZA65_RS21020	0.55	-0.4
4,546,508	+		DZA65_RS21020	0.55	+0.5
4,546,509	-		DZA65_RS21020	0.55	+0.8
4,546,509	-		DZA65_RS21020	0.55	+0.3
4,546,509	-		DZA65_RS21020	0.55	-0.8
4,546,509	-		DZA65_RS21020	0.55	-1.2
4,546,509	-		DZA65_RS21020	0.55	-0.7
4,546,509	-		DZA65_RS21020	0.55	+0.8
4,546,509	-		DZA65_RS21020	0.55	-0.7
4,546,536	-		DZA65_RS21020	0.57	-1.1
4,546,601	+		DZA65_RS21020	0.62	-0.8
4,546,633	+		DZA65_RS21020	0.64	-1.1
4,546,633	+		DZA65_RS21020	0.64	+0.4
4,546,634	-		DZA65_RS21020	0.64	-0.7
4,546,649	+				-0.4
4,546,649	+		DZA65_RS21020	0.65	-0.7
4,546,649	+		DZA65_RS21020	0.65	+0.2
4,546,650	-		DZA65_RS21020	0.65	+0.7
4,546,650	-		DZA65_RS21020	0.65	-0.1
4,546,658	+		DZA65_RS21020	0.66	+0.3
4,546,664	+		DZA65_RS21020	0.66	+1.2
4,546,665	-		DZA65_RS21020	0.67	+1.6
4,546,665	-		DZA65_RS21020	0.67	-2.2
4,546,665	-		DZA65_RS21020	0.67	+0.6
4,546,746	+		DZA65_RS21020	0.73	-0.0
4,546,746	+		DZA65_RS21020	0.73	-0.4
4,546,747	-		DZA65_RS21020	0.73	-0.9
4,546,775	-		DZA65_RS21020	0.75	-0.7
4,546,781	+		DZA65_RS21020	0.75	-0.4
4,546,781	+		DZA65_RS21020	0.75	-0.3
4,546,782	-		DZA65_RS21020	0.75	+0.3
4,546,782	-		DZA65_RS21020	0.75	+0.5
4,546,850	+				+0.6
4,546,851	-		DZA65_RS21020	0.80	+0.6
4,546,943	+		DZA65_RS21020	0.87	+0.3
4,546,982	+				-0.5
4,547,040	+				-0.8
4,547,151	+				+0.3
4,547,151	+				-0.4
4,547,233	-				+1.2
4,547,275	+				+0.5
4,547,276	-				+0.7
4,547,276	-				-0.4
4,547,276	-				-0.5
4,547,283	+				-0.7
4,547,283	+				+1.2
4,547,284	-				-0.4
4,547,329	-				+1.2
4,547,329	-				-0.2
4,547,343	+				+1.5
4,547,343	+				+0.1
4,547,344	-				-1.1
4,547,344	-				+0.3
4,547,344	-				-1.7
4,547,398	+		DZA65_RS21025	0.11	-0.5
4,547,398	+		DZA65_RS21025	0.11	+0.7
4,547,398	+		DZA65_RS21025	0.11	+0.6
4,547,398	+		DZA65_RS21025	0.11	+1.6
4,547,398	+		DZA65_RS21025	0.11	+0.4
4,547,398	+		DZA65_RS21025	0.11	+0.7
4,547,398	+		DZA65_RS21025	0.11	-0.2
4,547,398	+		DZA65_RS21025	0.11	-0.2
4,547,398	+		DZA65_RS21025	0.11	-1.2
4,547,399	-		DZA65_RS21025	0.11	+1.7
4,547,399	-		DZA65_RS21025	0.11	-1.0
4,547,399	-		DZA65_RS21025	0.11	+0.4
4,547,399	-		DZA65_RS21025	0.11	+0.8
4,547,399	-		DZA65_RS21025	0.11	+0.4
4,547,399	-		DZA65_RS21025	0.11	+2.2
4,547,399	-		DZA65_RS21025	0.11	+0.3
4,547,399	-		DZA65_RS21025	0.11	-0.4
4,547,399	-		DZA65_RS21025	0.11	-0.4
4,547,463	+		DZA65_RS21025	0.19	+1.2
4,547,464	-		DZA65_RS21025	0.19	+0.4
4,547,464	-				+1.2
4,547,464	-		DZA65_RS21025	0.19	-0.1
4,547,464	-		DZA65_RS21025	0.19	+0.2
4,547,506	+		DZA65_RS21025	0.24	+0.8
4,547,506	+		DZA65_RS21025	0.24	-0.8
4,547,507	-		DZA65_RS21025	0.24	+1.2
4,547,507	-		DZA65_RS21025	0.24	-0.9
4,547,728	-		DZA65_RS21025	0.52	-0.3
4,547,803	-		DZA65_RS21025	0.61	-0.6
4,547,832	+		DZA65_RS21025	0.65	-1.2
4,547,832	+		DZA65_RS21025	0.65	-0.2
4,547,832	+		DZA65_RS21025	0.65	-0.2
4,547,832	+		DZA65_RS21025	0.65	-0.2
4,547,832	+		DZA65_RS21025	0.65	+1.4
4,547,832	+		DZA65_RS21025	0.65	-1.1
4,547,833	-		DZA65_RS21025	0.65	+0.6
4,547,833	-		DZA65_RS21025	0.65	-0.0
4,547,833	-		DZA65_RS21025	0.65	+0.7
4,547,833	-		DZA65_RS21025	0.65	+0.7
4,547,905	+		DZA65_RS21025	0.74	-0.5
4,547,906	-		DZA65_RS21025	0.74	+1.6
4,547,906	-		DZA65_RS21025	0.74	-1.9
4,547,906	-		DZA65_RS21025	0.74	+0.1
4,547,906	-		DZA65_RS21025	0.74	+0.2
4,547,906	-		DZA65_RS21025	0.74	-0.8
4,547,929	+		DZA65_RS21025	0.77	+0.0
4,547,929	+		DZA65_RS21025	0.77	-0.7
4,547,929	+		DZA65_RS21025	0.77	-0.4
4,547,929	+		DZA65_RS21025	0.77	-0.2
4,547,929	+		DZA65_RS21025	0.77	+0.4
4,547,929	+		DZA65_RS21025	0.77	+0.1
4,547,929	+		DZA65_RS21025	0.77	-0.1
4,547,929	+		DZA65_RS21025	0.77	-0.4
4,547,929	+		DZA65_RS21025	0.77	+0.4
4,547,929	+		DZA65_RS21025	0.77	+0.7
4,547,930	-		DZA65_RS21025	0.77	-0.4
4,547,930	-		DZA65_RS21025	0.77	-0.2
4,547,930	-		DZA65_RS21025	0.77	+0.0
4,547,930	-		DZA65_RS21025	0.77	-0.1
4,547,930	-		DZA65_RS21025	0.77	+0.7
4,547,937	+		DZA65_RS21025	0.78	+0.6
4,547,937	+		DZA65_RS21025	0.78	-0.3
4,547,937	+		DZA65_RS21025	0.78	-2.2
4,547,937	+		DZA65_RS21025	0.78	-0.4
4,547,937	+		DZA65_RS21025	0.78	-0.4
4,547,937	+		DZA65_RS21025	0.78	+0.2
4,547,937	+		DZA65_RS21025	0.78	-1.4
4,547,937	+		DZA65_RS21025	0.78	+0.4
4,547,938	-		DZA65_RS21025	0.78	+1.2
4,547,938	-		DZA65_RS21025	0.78	+0.1
4,547,938	-		DZA65_RS21025	0.78	+2.7
4,547,938	-		DZA65_RS21025	0.78	+0.4
4,547,938	-		DZA65_RS21025	0.78	-0.4
4,547,938	-		DZA65_RS21025	0.78	-0.2
4,547,981	-		DZA65_RS21025	0.83	+0.2
4,548,051	+				-0.6
4,548,051	+				-1.8
4,548,051	+				-1.4
4,548,051	+				-0.1
4,548,051	+				+1.2
4,548,052	-				-0.4
4,548,114	+				+1.6
4,548,115	-				+0.8
4,548,115	-				-0.0
4,548,118	+				-1.0
4,548,118	+				+2.7
4,548,118	+				+1.2
4,548,118	+				-1.7
4,548,118	+				-0.6
4,548,118	+				+0.7
4,548,118	+				-0.7
4,548,118	+				+1.2
4,548,118	+				+0.6
4,548,118	+				-0.4
4,548,118	+				-1.0
4,548,118	+				-0.4
4,548,118	+				-0.5
4,548,118	+				-0.2
4,548,118	+				-0.6
4,548,118	+				+0.3
4,548,118	+				+0.9
4,548,118	+				-0.2
4,548,118	+				-2.2
4,548,118	+				+1.7
4,548,118	+				+0.8
4,548,118	+				+0.6
4,548,118	+				+0.6
4,548,118	+				-0.4
4,548,118	+				-1.8
4,548,118	+				+1.2
4,548,118	+				+0.2
4,548,118	+				+0.8
4,548,118	+				-0.8
4,548,119	-				+0.4
4,548,119	-				+0.6
4,548,119	-				-1.8
4,548,119	-				+0.4
4,548,119	-				-1.2
4,548,119	-				+0.3
4,548,119	-				+0.9
4,548,119	-				+0.6
4,548,119	-				+0.2
4,548,119	-				+1.0
4,548,119	-				+0.6
4,548,119	-				-0.2
4,548,119	-				-0.8
4,548,119	-				-1.9
4,548,119	-				+1.2
4,548,119	-				-0.8
4,548,119	-				-0.4
4,548,119	-				+1.5
4,548,119	-				+0.5
4,548,119	-				+1.2
4,548,119	-				+0.6
4,548,119	-				-0.2
4,548,119	-				-0.4
4,548,119	-				+0.0
4,548,169	+				-1.3
4,548,169	+				-0.5
4,548,169	+				-0.4
4,548,169	+				+0.2
4,548,169	+				-0.2
4,548,169	+				-0.3
4,548,169	+				-1.4
4,548,169	+				+0.7
4,548,169	+				+0.5
4,548,170	-				+2.2
4,548,170	-				-1.2
4,548,170	-				+0.6
4,548,170	-				-0.8
4,548,172	+				+0.5
4,548,172	+				+0.1
4,548,173	-				+0.0
4,548,173	-				-0.9
4,548,173	-				+0.6
4,548,178	+				-0.3
4,548,178	+				+0.2
4,548,178	+				+1.9
4,548,178	+				-0.0
4,548,179	-				-0.1
4,548,179	-				+0.2
4,548,179	-				-0.2
4,548,179	-				-1.7
4,548,179	-				+1.0
4,548,179	-				-0.5
4,548,179	-				+1.7
4,548,271	+		DZA65_RS21030	0.10	-0.5
4,548,272	-		DZA65_RS21030	0.10	-0.0
4,548,272	-		DZA65_RS21030	0.10	-1.7
4,548,272	-		DZA65_RS21030	0.10	+1.3
4,548,272	-		DZA65_RS21030	0.10	+0.3
4,548,272	-		DZA65_RS21030	0.10	-1.2
4,548,272	-		DZA65_RS21030	0.10	+0.2
4,548,272	-		DZA65_RS21030	0.10	+1.2
4,548,451	+		DZA65_RS21030	0.28	-0.4
4,548,451	+		DZA65_RS21030	0.28	-0.1
4,548,451	+		DZA65_RS21030	0.28	-0.8
4,548,451	+		DZA65_RS21030	0.28	-0.8
4,548,451	+		DZA65_RS21030	0.28	+0.4
4,548,451	+		DZA65_RS21030	0.28	+0.7
4,548,451	+		DZA65_RS21030	0.28	-0.0
4,548,451	+		DZA65_RS21030	0.28	-0.3
4,548,451	+		DZA65_RS21030	0.28	+0.4
4,548,451	+		DZA65_RS21030	0.28	-0.1
4,548,452	-		DZA65_RS21030	0.28	+0.2
4,548,452	-		DZA65_RS21030	0.28	-1.2
4,548,452	-		DZA65_RS21030	0.28	+0.1
4,548,452	-		DZA65_RS21030	0.28	-0.2
4,548,452	-		DZA65_RS21030	0.28	+0.2
4,548,452	-		DZA65_RS21030	0.28	-0.3
4,548,490	+		DZA65_RS21030	0.32	-0.4
4,548,490	+		DZA65_RS21030	0.32	+0.0
4,548,491	-		DZA65_RS21030	0.32	+0.4
4,548,491	-		DZA65_RS21030	0.32	+1.7
4,548,546	-		DZA65_RS21030	0.38	+0.4
4,548,583	+		DZA65_RS21030	0.41	+0.7
4,548,583	+		DZA65_RS21030	0.41	+0.6
4,548,583	+		DZA65_RS21030	0.41	-1.2
4,548,584	-		DZA65_RS21030	0.42	+2.5
4,548,584	-		DZA65_RS21030	0.42	-2.2
4,548,584	-		DZA65_RS21030	0.42	-2.0
4,548,584	-		DZA65_RS21030	0.42	-0.7
4,548,584	-		DZA65_RS21030	0.42	+0.4
4,548,586	+		DZA65_RS21030	0.42	-0.4
4,548,586	+		DZA65_RS21030	0.42	+1.2
4,548,586	+		DZA65_RS21030	0.42	-1.3
4,548,586	+		DZA65_RS21030	0.42	+0.7
4,548,586	+		DZA65_RS21030	0.42	-1.8
4,548,587	-		DZA65_RS21030	0.42	+0.7
4,548,587	-		DZA65_RS21030	0.42	+1.2
4,548,587	-		DZA65_RS21030	0.42	-1.2
4,548,587	-		DZA65_RS21030	0.42	+0.5
4,548,587	-		DZA65_RS21030	0.42	+0.7
4,548,587	-		DZA65_RS21030	0.42	-0.3
4,548,773	+		DZA65_RS21030	0.61	-0.1
4,548,773	+		DZA65_RS21030	0.61	+2.2
4,548,774	-		DZA65_RS21030	0.61	-0.5
4,548,774	-		DZA65_RS21030	0.61	+1.3
4,548,776	-		DZA65_RS21030	0.61	+1.7
4,548,826	+		DZA65_RS21030	0.66	-0.4
4,548,826	+		DZA65_RS21030	0.66	-0.4
4,548,826	+		DZA65_RS21030	0.66	-0.5
4,548,826	+		DZA65_RS21030	0.66	-0.4
4,548,827	-		DZA65_RS21030	0.66	-0.4
4,548,827	-		DZA65_RS21030	0.66	+0.3
4,548,827	-		DZA65_RS21030	0.66	-1.7
4,548,842	+		DZA65_RS21030	0.68	-0.4
4,548,842	+		DZA65_RS21030	0.68	-0.2
4,548,842	+		DZA65_RS21030	0.68	+0.9
4,548,843	-		DZA65_RS21030	0.68	+1.2
4,548,843	-		DZA65_RS21030	0.68	-1.2
4,548,941	-		DZA65_RS21030	0.78	-0.0
4,548,955	+		DZA65_RS21030	0.79	+0.2
4,548,956	-		DZA65_RS21030	0.79	-0.3
4,548,956	-		DZA65_RS21030	0.79	+1.4
4,548,964	+		DZA65_RS21030	0.80	-0.3
4,548,964	+		DZA65_RS21030	0.80	+0.8
4,548,964	+		DZA65_RS21030	0.80	-1.5
4,548,964	+		DZA65_RS21030	0.80	-1.2
4,548,964	+		DZA65_RS21030	0.80	-0.2
4,548,965	-		DZA65_RS21030	0.80	-0.4
4,548,965	-		DZA65_RS21030	0.80	-0.4
4,548,965	-		DZA65_RS21030	0.80	-0.9
4,548,965	-		DZA65_RS21030	0.80	-0.2
4,548,965	-		DZA65_RS21030	0.80	+0.3
4,548,965	-		DZA65_RS21030	0.80	+0.7
4,548,965	-				-0.1
4,549,041	+		DZA65_RS21030	0.88	-0.8
4,549,041	+		DZA65_RS21030	0.88	+0.3
4,549,041	+		DZA65_RS21030	0.88	+1.0
4,549,041	+		DZA65_RS21030	0.88	+0.3
4,549,042	-		DZA65_RS21030	0.88	+0.0
4,549,042	-		DZA65_RS21030	0.88	-0.2
4,549,042	-		DZA65_RS21030	0.88	+0.2