Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11285

Experiment: 1.88mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1.88mM_PTB
2,397,955	+		DZA65_RS11280	0.54	-0.2
2,397,955	+		DZA65_RS11280	0.54	-0.1
2,397,955	+		DZA65_RS11280	0.54	-0.8
2,397,955	+		DZA65_RS11280	0.54	-0.0
2,397,955	+		DZA65_RS11280	0.54	-0.7
2,397,955	+		DZA65_RS11280	0.54	-1.1
2,397,956	-		DZA65_RS11280	0.55	-0.5
2,397,956	-		DZA65_RS11280	0.55	-2.0
2,397,956	-		DZA65_RS11280	0.55	-0.3
2,398,220	+		DZA65_RS11280	0.69	+0.5
2,398,220	+		DZA65_RS11280	0.69	-3.1
2,398,220	+		DZA65_RS11280	0.69	-0.5
2,398,220	+		DZA65_RS11280	0.69	-0.2
2,398,220	+		DZA65_RS11280	0.69	-0.5
2,398,220	+		DZA65_RS11280	0.69	+0.0
2,398,220	+		DZA65_RS11280	0.69	-1.7
2,398,220	+		DZA65_RS11280	0.69	-0.6
2,398,220	+		DZA65_RS11280	0.69	+0.5
2,398,220	+		DZA65_RS11280	0.69	-1.1
2,398,220	+		DZA65_RS11280	0.69	-1.4
2,398,220	+		DZA65_RS11280	0.69	+0.5
2,398,221	-		DZA65_RS11280	0.69	+0.5
2,398,221	-		DZA65_RS11280	0.69	+0.5
2,398,221	-		DZA65_RS11280	0.69	-0.5
2,398,221	-		DZA65_RS11280	0.69	+0.2
2,398,221	-		DZA65_RS11280	0.69	+0.0
2,398,221	-		DZA65_RS11280	0.69	-0.3
2,398,221	-		DZA65_RS11280	0.69	+0.1
2,398,221	-		DZA65_RS11280	0.69	+1.2
2,398,221	-		DZA65_RS11280	0.69	+0.9
2,398,221	-		DZA65_RS11280	0.69	-0.8
2,398,221	-		DZA65_RS11280	0.69	-0.4
2,398,222	+		DZA65_RS11280	0.69	-0.0
2,398,222	+		DZA65_RS11280	0.69	+0.8
2,398,222	+		DZA65_RS11280	0.69	-0.8
2,398,223	-		DZA65_RS11280	0.69	-0.1
2,398,223	-		DZA65_RS11280	0.69	-0.2
2,398,223	-		DZA65_RS11280	0.69	-0.3
2,398,299	-		DZA65_RS11280	0.73	-1.8
2,398,342	+		DZA65_RS11280	0.76	+0.5
2,398,373	-		DZA65_RS11280	0.77	+1.7
2,398,393	+		DZA65_RS11280	0.78	+0.9
2,398,394	-		DZA65_RS11280	0.78	+1.5
2,398,411	+		DZA65_RS11280	0.79	-0.3
2,398,411	+		DZA65_RS11280	0.79	-0.8
2,398,411	+		DZA65_RS11280	0.79	-0.1
2,398,412	-		DZA65_RS11280	0.79	+0.3
2,398,426	+		DZA65_RS11280	0.80	+2.5
2,398,427	-		DZA65_RS11280	0.80	+0.9
2,398,427	-		DZA65_RS11280	0.80	-0.5
2,398,507	+		DZA65_RS11280	0.85	-0.3
2,398,507	+		DZA65_RS11280	0.85	+0.8
2,398,508	-		DZA65_RS11280	0.85	-0.9
2,398,529	-		DZA65_RS11280	0.86	-1.3
2,398,529	-		DZA65_RS11280	0.86	-0.1
2,398,533	+		DZA65_RS11280	0.86	-0.2
2,398,533	+		DZA65_RS11280	0.86	+0.6
2,398,534	-		DZA65_RS11280	0.86	-1.6
2,398,534	-		DZA65_RS11280	0.86	-0.8
2,398,534	-		DZA65_RS11280	0.86	+1.2
2,398,650	+				-0.3
2,398,651	-				-1.0
2,398,651	-				+0.9
2,398,651	-				+0.5
2,398,651	-				-0.0
2,398,651	-				-0.8
2,398,660	+				-0.9
2,398,661	-				-0.1
2,398,680	+				+0.1
2,398,681	-				+0.1
2,398,681	-				-1.2
2,398,681	-				-0.7
2,398,733	+				-0.5
2,398,790	-				+1.5
2,398,808	-				-0.2
2,398,822	+				+0.5
2,398,822	+				-0.5
2,398,822	+				-1.2
2,398,822	+				-2.1
2,398,823	-				-0.2
2,398,844	+				+0.0
2,398,845	-				-0.9
2,398,848	+				-1.5
2,398,848	+				-0.7
2,398,849	-				-1.1
2,398,849	-				-0.1
2,398,849	-				+0.1
2,398,849	-				-0.1
2,398,852	+				-0.5
2,398,853	-				-0.0
2,398,853	-				-1.8
2,398,853	-				+1.3
2,398,858	+				+0.1
2,398,858	+				-0.3
2,398,858	+				-1.1
2,398,858	+				+0.5
2,398,858	+				-2.3
2,398,862	+				-0.1
2,398,863	-				+0.5
2,398,900	+				-0.9
2,398,900	+				-0.5
2,398,915	-				-0.5
2,398,967	+				+0.7
2,398,968	-				+1.7
2,398,972	+				+0.5
2,398,978	-				-0.2
2,399,026	-				-1.5
2,399,059	-				+0.5
2,399,069	+		DZA65_RS11285	0.10	+0.5
2,399,070	-		DZA65_RS11285	0.10	-0.3
2,399,084	+		DZA65_RS11285	0.11	-0.3
2,399,084	+		DZA65_RS11285	0.11	-0.9
2,399,084	+				+1.5
2,399,085	-		DZA65_RS11285	0.11	-0.0
2,399,085	-		DZA65_RS11285	0.11	-1.7
2,399,086	+		DZA65_RS11285	0.11	+0.2
2,399,086	+		DZA65_RS11285	0.11	+0.7
2,399,086	+		DZA65_RS11285	0.11	+1.1
2,399,086	+		DZA65_RS11285	0.11	-0.8
2,399,086	+		DZA65_RS11285	0.11	+0.1
2,399,086	+		DZA65_RS11285	0.11	-1.3
2,399,087	-		DZA65_RS11285	0.12	-2.0
2,399,124	+		DZA65_RS11285	0.14	-0.1
2,399,124	+		DZA65_RS11285	0.14	-0.5
2,399,124	+		DZA65_RS11285	0.14	-0.5
2,399,125	-		DZA65_RS11285	0.14	+0.3
2,399,280	+		DZA65_RS11285	0.24	+1.5
2,399,280	+		DZA65_RS11285	0.24	+0.1
2,399,281	-		DZA65_RS11285	0.24	-2.8
2,399,281	-		DZA65_RS11285	0.24	+0.2
2,399,281	-		DZA65_RS11285	0.24	+0.5
2,399,304	+		DZA65_RS11285	0.25	-1.1
2,399,304	+		DZA65_RS11285	0.25	-0.7
2,399,304	+		DZA65_RS11285	0.25	-0.2
2,399,304	+		DZA65_RS11285	0.25	-0.8
2,399,305	-		DZA65_RS11285	0.26	+0.5
2,399,305	-		DZA65_RS11285	0.26	+0.5
2,399,305	-		DZA65_RS11285	0.26	-0.6
2,399,305	-		DZA65_RS11285	0.26	+0.8
2,399,305	-		DZA65_RS11285	0.26	+0.2
2,399,305	-		DZA65_RS11285	0.26	+0.3
2,399,305	-		DZA65_RS11285	0.26	-0.1
2,399,336	+		DZA65_RS11285	0.28	-0.8
2,399,336	+				-0.5
2,399,336	+		DZA65_RS11285	0.28	-0.5
2,399,336	+		DZA65_RS11285	0.28	+0.5
2,399,336	+		DZA65_RS11285	0.28	-1.0
2,399,336	+		DZA65_RS11285	0.28	-0.8
2,399,336	+		DZA65_RS11285	0.28	-0.2
2,399,393	+				+0.5
2,399,393	+		DZA65_RS11285	0.31	-0.5
2,399,393	+		DZA65_RS11285	0.31	-0.9
2,399,394	-		DZA65_RS11285	0.31	+0.5
2,399,394	-		DZA65_RS11285	0.31	-0.4
2,399,394	-		DZA65_RS11285	0.31	-0.2
2,399,394	-		DZA65_RS11285	0.31	-1.8
2,399,396	+		DZA65_RS11285	0.31	+0.9
2,399,396	+		DZA65_RS11285	0.31	-0.1
2,399,396	+		DZA65_RS11285	0.31	+0.1
2,399,396	+		DZA65_RS11285	0.31	+0.5
2,399,396	+		DZA65_RS11285	0.31	-0.5
2,399,396	+		DZA65_RS11285	0.31	-0.7
2,399,396	+		DZA65_RS11285	0.31	-0.8
2,399,396	+		DZA65_RS11285	0.31	-0.7
2,399,396	+		DZA65_RS11285	0.31	+1.0
2,399,396	+		DZA65_RS11285	0.31	+0.0
2,399,396	+		DZA65_RS11285	0.31	+0.5
2,399,396	+		DZA65_RS11285	0.31	+0.4
2,399,397	-		DZA65_RS11285	0.31	-0.5
2,399,397	-		DZA65_RS11285	0.31	+0.0
2,399,397	-		DZA65_RS11285	0.31	-0.6
2,399,397	-		DZA65_RS11285	0.31	+0.9
2,399,397	-		DZA65_RS11285	0.31	-1.7
2,399,397	-		DZA65_RS11285	0.31	+0.1
2,399,402	+		DZA65_RS11285	0.32	-0.2
2,399,402	+		DZA65_RS11285	0.32	+1.4
2,399,402	+		DZA65_RS11285	0.32	-0.8
2,399,402	+		DZA65_RS11285	0.32	+0.2
2,399,402	+		DZA65_RS11285	0.32	-1.8
2,399,402	+		DZA65_RS11285	0.32	-0.5
2,399,403	-		DZA65_RS11285	0.32	+1.8
2,399,403	-		DZA65_RS11285	0.32	-0.7
2,399,403	-		DZA65_RS11285	0.32	+0.6
2,399,403	-		DZA65_RS11285	0.32	+1.5
2,399,403	-		DZA65_RS11285	0.32	-0.5
2,399,403	-		DZA65_RS11285	0.32	-0.5
2,399,403	-		DZA65_RS11285	0.32	-1.0
2,399,403	-		DZA65_RS11285	0.32	-2.1
2,399,403	-		DZA65_RS11285	0.32	-0.3
2,399,599	+		DZA65_RS11285	0.44	+0.5
2,399,599	+		DZA65_RS11285	0.44	+1.1
2,399,599	+		DZA65_RS11285	0.44	-1.1
2,399,599	+		DZA65_RS11285	0.44	-1.3
2,399,599	+		DZA65_RS11285	0.44	+0.8
2,399,600	-		DZA65_RS11285	0.45	-1.1
2,399,600	-		DZA65_RS11285	0.45	+0.2
2,399,600	-		DZA65_RS11285	0.45	-2.2
2,399,600	-		DZA65_RS11285	0.45	+0.5
2,399,620	+		DZA65_RS11285	0.46	+1.5
2,399,620	+		DZA65_RS11285	0.46	+0.2
2,399,620	+		DZA65_RS11285	0.46	+0.3
2,399,621	-		DZA65_RS11285	0.46	+0.1
2,399,621	-				-1.5
2,399,621	-		DZA65_RS11285	0.46	-0.5
2,399,621	-		DZA65_RS11285	0.46	+0.5
2,399,621	-		DZA65_RS11285	0.46	-1.8
2,399,621	-		DZA65_RS11285	0.46	-0.5
2,399,621	-		DZA65_RS11285	0.46	-0.5
2,399,633	+		DZA65_RS11285	0.47	+1.1
2,399,633	+		DZA65_RS11285	0.47	+0.5
2,399,637	-		DZA65_RS11285	0.47	+0.5
2,399,669	+				+0.5
2,399,669	+		DZA65_RS11285	0.49	-0.1
2,399,669	+		DZA65_RS11285	0.49	+0.5
2,399,669	+		DZA65_RS11285	0.49	+0.0
2,399,669	+		DZA65_RS11285	0.49	+0.9
2,399,669	+		DZA65_RS11285	0.49	+0.2
2,399,669	+		DZA65_RS11285	0.49	-0.6
2,399,669	+		DZA65_RS11285	0.49	-0.8
2,399,669	+				-0.5
2,399,669	+		DZA65_RS11285	0.49	+0.1
2,399,669	+		DZA65_RS11285	0.49	+0.5
2,399,669	+		DZA65_RS11285	0.49	+0.2
2,399,669	+		DZA65_RS11285	0.49	+0.1
2,399,669	+		DZA65_RS11285	0.49	+0.5
2,399,669	+		DZA65_RS11285	0.49	-0.5
2,399,669	+		DZA65_RS11285	0.49	-0.5
2,399,669	+		DZA65_RS11285	0.49	-0.5
2,399,670	-		DZA65_RS11285	0.49	+0.6
2,399,670	-		DZA65_RS11285	0.49	-1.2
2,399,670	-		DZA65_RS11285	0.49	-0.8
2,399,670	-		DZA65_RS11285	0.49	-0.6
2,399,670	-		DZA65_RS11285	0.49	+0.1
2,399,670	-		DZA65_RS11285	0.49	-0.8
2,399,670	-		DZA65_RS11285	0.49	+0.0
2,399,670	-		DZA65_RS11285	0.49	+0.4
2,399,670	-		DZA65_RS11285	0.49	-0.1
2,399,670	-		DZA65_RS11285	0.49	-0.8
2,399,670	-		DZA65_RS11285	0.49	+0.5
2,399,670	-		DZA65_RS11285	0.49	-1.2
2,399,670	-		DZA65_RS11285	0.49	+0.0
2,399,670	-		DZA65_RS11285	0.49	+1.0
2,399,981	+		DZA65_RS11285	0.69	+0.5
2,399,982	-		DZA65_RS11285	0.69	+0.9
2,399,982	-		DZA65_RS11285	0.69	+2.2
2,399,983	+		DZA65_RS11285	0.69	+0.7
2,399,983	+		DZA65_RS11285	0.69	-0.1
2,399,983	+		DZA65_RS11285	0.69	-0.4
2,399,983	+		DZA65_RS11285	0.69	-0.5
2,399,984	-		DZA65_RS11285	0.69	-0.1
2,400,050	-		DZA65_RS11285	0.73	-0.1
2,400,075	-		DZA65_RS11285	0.75	-0.5
2,400,075	-		DZA65_RS11285	0.75	-1.3
2,400,075	-		DZA65_RS11285	0.75	+2.1
2,400,159	-		DZA65_RS11285	0.80	+0.5
2,400,323	+				+0.0
2,400,323	+				-0.0
2,400,323	+				-0.5
2,400,324	-				-0.3
2,400,329	+				+0.5
2,400,329	+				-0.5
2,400,330	-				+0.5
2,400,330	-				+0.3
2,400,347	+				+0.5
2,400,389	+				+0.5
2,400,389	+				+0.7
2,400,390	-				-0.3
2,400,406	+				+0.5
2,400,406	+				-0.8
2,400,461	+				-0.0
2,400,461	+				-1.1
2,400,462	-				+0.5
2,400,480	+				-0.3
2,400,480	+				-1.1
2,400,480	+				-0.5
2,400,480	+				+2.1
2,400,480	+				-1.1
2,400,481	-				+0.1
2,400,481	-				+0.2
2,400,494	+				-1.4
2,400,494	+				-0.5
2,400,565	-				-2.1
2,400,609	+				-1.1
2,400,616	+				+0.1
2,400,616	+				+1.3
2,400,616	+				-1.3
2,400,616	+				+0.3
2,400,617	-		DZA65_RS11290	0.10	-0.1
2,400,617	-		DZA65_RS11290	0.10	+1.1
2,400,617	-		DZA65_RS11290	0.10	+0.9
2,400,617	-		DZA65_RS11290	0.10	-2.4
2,400,617	-		DZA65_RS11290	0.10	-2.1
2,400,617	-		DZA65_RS11290	0.10	-0.2
2,400,617	-		DZA65_RS11290	0.10	-1.2
2,400,617	-		DZA65_RS11290	0.10	-0.5
2,400,617	-		DZA65_RS11290	0.10	+0.0
2,400,621	-		DZA65_RS11290	0.11	-1.8
2,400,628	+		DZA65_RS11290	0.12	-0.3
2,400,629	-		DZA65_RS11290	0.12	-0.1
2,400,629	-		DZA65_RS11290	0.12	-0.5
2,400,660	-		DZA65_RS11290	0.16	-1.3
2,400,706	+		DZA65_RS11290	0.22	-0.5
2,400,706	+		DZA65_RS11290	0.22	+0.2
2,400,707	-		DZA65_RS11290	0.22	+0.4
2,400,707	-		DZA65_RS11290	0.22	-1.3
2,400,707	-		DZA65_RS11290	0.22	-0.1
2,400,833	+		DZA65_RS11290	0.38	+1.5
2,400,833	+		DZA65_RS11290	0.38	-0.5
2,400,833	+		DZA65_RS11290	0.38	-0.4
2,400,833	+		DZA65_RS11290	0.38	-0.7
2,400,834	-		DZA65_RS11290	0.38	-0.7
2,400,834	-		DZA65_RS11290	0.38	+1.4
2,400,834	-		DZA65_RS11290	0.38	+1.5
2,400,834	-		DZA65_RS11290	0.38	-2.1
2,400,907	-		DZA65_RS11290	0.48	-0.6
2,401,071	-		DZA65_RS11290	0.69	-0.2
2,401,071	-		DZA65_RS11290	0.69	+1.5
2,401,106	+		DZA65_RS11290	0.74	-1.5
2,401,107	-		DZA65_RS11290	0.74	+0.3
2,401,230	+				+0.7
2,401,305	+				-0.1
2,401,305	+				-0.5
2,401,305	+				-1.4
2,401,305	+				-1.4
2,401,305	+				+0.3
2,401,306	-				-0.7
2,401,306	-				-0.5
2,401,306	-				+1.5
2,401,306	-				+0.5
2,401,306	-				-0.2
2,401,306	-				-0.1
2,401,306	-				-0.8
2,401,306	-				-0.7
2,401,306	-				-1.1
2,401,306	-				+0.5
2,401,306	-				-0.5
2,401,306	-				-0.2
2,401,306	-				+0.0
2,401,306	-				-0.5
2,401,306	-				+0.3
2,401,306	-				-0.0
2,401,306	-				+0.2
2,401,306	-				-0.8
2,401,358	-				+0.2