Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14550

Experiment: 1.88mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1.88mM_PTB
3,168,164	+		DZA65_RS14545	0.13	+0.4
3,168,171	-		DZA65_RS14545	0.14	-0.4
3,168,193	+		DZA65_RS14545	0.16	-1.0
3,168,193	+		DZA65_RS14545	0.16	-0.4
3,168,194	-		DZA65_RS14545	0.16	-0.2
3,168,232	+		DZA65_RS14545	0.20	-1.0
3,168,258	+		DZA65_RS14545	0.22	-0.3
3,168,265	-				-0.2
3,168,348	-		DZA65_RS14545	0.32	-0.8
3,168,427	+		DZA65_RS14545	0.40	-0.2
3,168,428	-		DZA65_RS14545	0.40	+0.2
3,168,428	-		DZA65_RS14545	0.40	-0.2
3,168,442	+		DZA65_RS14545	0.41	-0.9
3,168,472	-		DZA65_RS14545	0.44	+0.1
3,168,472	-		DZA65_RS14545	0.44	-0.8
3,168,472	-				+0.6
3,168,474	+		DZA65_RS14545	0.44	-0.3
3,168,475	-		DZA65_RS14545	0.45	+0.3
3,168,518	+		DZA65_RS14545	0.49	-2.0
3,168,562	-		DZA65_RS14545	0.53	+0.8
3,168,562	-		DZA65_RS14545	0.53	-1.2
3,168,582	+		DZA65_RS14545	0.55	-1.0
3,168,635	+		DZA65_RS14545	0.61	+0.8
3,168,635	+		DZA65_RS14545	0.61	+1.4
3,168,635	+		DZA65_RS14545	0.61	+1.5
3,168,635	+		DZA65_RS14545	0.61	+0.2
3,168,635	+		DZA65_RS14545	0.61	+0.8
3,168,636	-		DZA65_RS14545	0.61	+1.8
3,168,668	+		DZA65_RS14545	0.64	+0.2
3,168,668	+		DZA65_RS14545	0.64	-0.8
3,168,668	+		DZA65_RS14545	0.64	-1.4
3,168,668	+		DZA65_RS14545	0.64	-2.4
3,168,668	+		DZA65_RS14545	0.64	+0.2
3,168,669	-		DZA65_RS14545	0.64	+1.4
3,168,669	-		DZA65_RS14545	0.64	-0.8
3,168,671	-		DZA65_RS14545	0.65	+0.2
3,168,671	-		DZA65_RS14545	0.65	-1.2
3,168,746	+		DZA65_RS14545	0.72	-0.2
3,168,746	+		DZA65_RS14545	0.72	+0.5
3,168,747	-		DZA65_RS14545	0.72	+1.1
3,168,750	+		DZA65_RS14545	0.73	-0.5
3,168,751	-		DZA65_RS14545	0.73	-0.5
3,168,751	-		DZA65_RS14545	0.73	-1.8
3,168,751	-		DZA65_RS14545	0.73	+0.2
3,168,751	-		DZA65_RS14545	0.73	+1.3
3,168,798	+		DZA65_RS14545	0.77	-1.5
3,168,798	+		DZA65_RS14545	0.77	+0.2
3,168,798	+		DZA65_RS14545	0.77	+0.0
3,168,798	+		DZA65_RS14545	0.77	-1.8
3,168,799	-		DZA65_RS14545	0.78	-0.8
3,168,799	-		DZA65_RS14545	0.78	-3.0
3,168,799	-		DZA65_RS14545	0.78	+0.8
3,168,799	-		DZA65_RS14545	0.78	-1.3
3,168,916	+		DZA65_RS14545	0.90	+0.5
3,168,916	+		DZA65_RS14545	0.90	+0.2
3,168,917	-		DZA65_RS14545	0.90	-0.8
3,168,917	-		DZA65_RS14545	0.90	-1.8
3,168,917	-		DZA65_RS14545	0.90	+1.3
3,168,919	+		DZA65_RS14545	0.90	-0.4
3,168,919	+		DZA65_RS14545	0.90	-0.2
3,168,919	+		DZA65_RS14545	0.90	-1.1
3,168,919	+		DZA65_RS14545	0.90	+0.0
3,168,920	-		DZA65_RS14545	0.90	+1.5
3,168,920	-		DZA65_RS14545	0.90	+0.8
3,168,950	+				+0.5
3,168,950	+				-0.2
3,168,951	-				-0.2
3,168,958	+				+0.8
3,168,958	+				+0.3
3,168,958	+				+0.2
3,168,958	+				+0.8
3,168,959	-				+0.0
3,168,959	-				+0.5
3,168,959	-				+0.1
3,168,959	-				+0.8
3,168,959	-				-1.5
3,168,959	-				-1.4
3,168,959	-				-0.2
3,168,959	-				-0.7
3,168,959	-				-1.0
3,168,959	-				-0.2
3,168,959	-				+1.8
3,168,959	-				+0.1
3,168,960	+				-2.0
3,168,960	+				-0.2
3,168,960	+				-0.8
3,168,960	+				+0.4
3,168,960	+				-1.8
3,168,960	+				-1.3
3,168,960	+				-1.9
3,168,961	-				-0.1
3,168,961	-				+0.4
3,168,961	-				-0.4
3,168,961	-				+0.4
3,168,961	-				-0.3
3,168,961	-				-0.8
3,168,961	-				-1.4
3,168,967	+				+0.0
3,168,967	+				-0.8
3,168,968	-				+0.8
3,168,968	-				+0.5
3,168,968	-				+1.8
3,168,990	+				-1.5
3,169,007	+				-0.2
3,169,008	-				-0.2
3,169,008	-				-0.4
3,169,054	+				+0.8
3,169,054	+				+0.4
3,169,055	-				-0.9
3,169,058	+				+0.4
3,169,074	+				+0.8
3,169,074	+				+0.8
3,169,074	+				-2.2
3,169,074	+				-1.0
3,169,074	+				+0.1
3,169,075	-				-0.4
3,169,075	-				-0.9
3,169,075	-				-0.2
3,169,075	-				+1.2
3,169,105	+				-0.2
3,169,133	+				+0.8
3,169,133	+				+0.8
3,169,180	+		DZA65_RS14550	0.12	-0.4
3,169,180	+		DZA65_RS14550	0.12	+0.7
3,169,181	-		DZA65_RS14550	0.12	-1.0
3,169,340	-		DZA65_RS14550	0.29	+0.2
3,169,438	+		DZA65_RS14550	0.39	-1.2
3,169,439	-		DZA65_RS14550	0.39	-1.3
3,169,465	+		DZA65_RS14550	0.42	-0.6
3,169,465	+		DZA65_RS14550	0.42	+0.6
3,169,466	-		DZA65_RS14550	0.42	-0.9
3,169,466	-		DZA65_RS14550	0.42	+0.2
3,169,466	-		DZA65_RS14550	0.42	-0.2
3,169,466	-		DZA65_RS14550	0.42	+0.2
3,169,498	+		DZA65_RS14550	0.46	-1.2
3,169,499	-		DZA65_RS14550	0.46	-2.0
3,169,522	+		DZA65_RS14550	0.48	-0.4
3,169,592	+		DZA65_RS14550	0.56	-0.6
3,169,592	+		DZA65_RS14550	0.56	-0.9
3,169,592	+		DZA65_RS14550	0.56	+0.6
3,169,592	+		DZA65_RS14550	0.56	+0.6
3,169,593	-		DZA65_RS14550	0.56	+1.2
3,169,603	-		DZA65_RS14550	0.57	+0.6
3,169,631	-		DZA65_RS14550	0.60	-0.2
3,169,671	+		DZA65_RS14550	0.64	-0.3
3,169,671	+		DZA65_RS14550	0.64	+0.1
3,169,671	+		DZA65_RS14550	0.64	+1.1
3,169,672	-		DZA65_RS14550	0.64	+0.2
3,169,672	-		DZA65_RS14550	0.64	-1.2
3,169,672	-		DZA65_RS14550	0.64	+1.0
3,169,672	-		DZA65_RS14550	0.64	-0.2
3,169,672	-		DZA65_RS14550	0.64	-0.8
3,169,698	+		DZA65_RS14550	0.67	-0.4
3,169,698	+		DZA65_RS14550	0.67	+0.2
3,169,698	+		DZA65_RS14550	0.67	+0.6
3,169,698	+		DZA65_RS14550	0.67	-0.2
3,169,699	-		DZA65_RS14550	0.67	-1.1
3,169,699	-		DZA65_RS14550	0.67	-0.4
3,169,699	-		DZA65_RS14550	0.67	+0.2
3,169,699	-		DZA65_RS14550	0.67	-0.5
3,169,702	+		DZA65_RS14550	0.68	+0.5
3,169,703	-		DZA65_RS14550	0.68	-0.6
3,169,741	+		DZA65_RS14550	0.72	+0.2
3,169,741	+		DZA65_RS14550	0.72	+0.8
3,169,741	+		DZA65_RS14550	0.72	+0.2
3,169,742	-		DZA65_RS14550	0.72	-1.2
3,169,742	-		DZA65_RS14550	0.72	-0.2
3,169,742	-		DZA65_RS14550	0.72	+1.2
3,169,742	-		DZA65_RS14550	0.72	-0.2
3,169,742	-		DZA65_RS14550	0.72	+0.1
3,169,743	+		DZA65_RS14550	0.72	-2.5
3,169,743	+		DZA65_RS14550	0.72	-1.4
3,169,743	+		DZA65_RS14550	0.72	+0.8
3,169,743	+		DZA65_RS14550	0.72	+0.5
3,169,743	+		DZA65_RS14550	0.72	-1.2
3,169,744	-		DZA65_RS14550	0.72	+0.1
3,169,744	-		DZA65_RS14550	0.72	-1.6
3,169,744	-		DZA65_RS14550	0.72	-0.2
3,169,744	-		DZA65_RS14550	0.72	-0.0
3,169,744	-		DZA65_RS14550	0.72	+1.8
3,169,744	-		DZA65_RS14550	0.72	+0.6
3,169,744	-		DZA65_RS14550	0.72	+0.4
3,169,744	-		DZA65_RS14550	0.72	+0.8
3,169,759	+		DZA65_RS14550	0.74	+0.1
3,169,761	+		DZA65_RS14550	0.74	-1.4
3,169,761	+		DZA65_RS14550	0.74	-0.5
3,169,761	+		DZA65_RS14550	0.74	-0.5
3,169,761	+		DZA65_RS14550	0.74	+0.0
3,169,761	+		DZA65_RS14550	0.74	-2.2
3,169,761	+		DZA65_RS14550	0.74	+0.8
3,169,761	+		DZA65_RS14550	0.74	-0.5
3,169,761	+		DZA65_RS14550	0.74	+1.4
3,169,761	+		DZA65_RS14550	0.74	-0.6
3,169,761	+		DZA65_RS14550	0.74	+0.4
3,169,761	+		DZA65_RS14550	0.74	-1.0
3,169,761	+		DZA65_RS14550	0.74	-0.4
3,169,761	+		DZA65_RS14550	0.74	+0.9
3,169,761	+		DZA65_RS14550	0.74	-2.0
3,169,761	+		DZA65_RS14550	0.74	+0.1
3,169,761	+		DZA65_RS14550	0.74	-1.8
3,169,761	+		DZA65_RS14550	0.74	-1.1
3,169,761	+		DZA65_RS14550	0.74	+0.4
3,169,761	+		DZA65_RS14550	0.74	-1.5
3,169,762	-		DZA65_RS14550	0.74	-1.4
3,169,762	-		DZA65_RS14550	0.74	-1.4
3,169,762	-		DZA65_RS14550	0.74	-0.1
3,169,762	-		DZA65_RS14550	0.74	-0.4
3,169,762	-		DZA65_RS14550	0.74	+0.1
3,169,762	-		DZA65_RS14550	0.74	+0.3
3,169,762	-		DZA65_RS14550	0.74	-2.1
3,169,762	-				-1.2
3,169,762	-		DZA65_RS14550	0.74	-1.5
3,169,762	-		DZA65_RS14550	0.74	-0.5
3,169,762	-		DZA65_RS14550	0.74	-0.2
3,169,762	-		DZA65_RS14550	0.74	-0.4
3,169,762	-		DZA65_RS14550	0.74	-0.2
3,169,762	-		DZA65_RS14550	0.74	-0.6
3,169,762	-		DZA65_RS14550	0.74	+0.1
3,169,762	-		DZA65_RS14550	0.74	-0.9
3,169,762	-		DZA65_RS14550	0.74	+0.2
3,169,762	-		DZA65_RS14550	0.74	+1.2
3,169,762	-		DZA65_RS14550	0.74	-0.2
3,169,762	-		DZA65_RS14550	0.74	+0.1
3,169,762	-		DZA65_RS14550	0.74	-1.1
3,169,762	-		DZA65_RS14550	0.74	-0.6
3,169,762	-		DZA65_RS14550	0.74	+0.8
3,169,765	+		DZA65_RS14550	0.74	-0.2
3,169,765	+		DZA65_RS14550	0.74	+0.3
3,169,765	+		DZA65_RS14550	0.74	+0.5
3,169,765	+		DZA65_RS14550	0.74	+0.8
3,169,765	+		DZA65_RS14550	0.74	+0.6
3,169,766	-		DZA65_RS14550	0.75	+0.8
3,169,766	-		DZA65_RS14550	0.75	-0.8
3,169,766	-		DZA65_RS14550	0.75	+0.2
3,169,766	-		DZA65_RS14550	0.75	-0.6
3,169,766	-		DZA65_RS14550	0.75	+0.1
3,169,800	-		DZA65_RS14550	0.78	+2.2
3,169,838	-		DZA65_RS14550	0.82	-0.2
3,169,877	-		DZA65_RS14550	0.86	-1.4
3,169,877	-		DZA65_RS14550	0.86	-1.2
3,169,877	-		DZA65_RS14550	0.86	+0.5
3,169,885	-		DZA65_RS14550	0.87	-1.6
3,169,906	+		DZA65_RS14550	0.90	+1.5
3,169,906	+		DZA65_RS14550	0.90	+0.4
3,169,907	-		DZA65_RS14550	0.90	-0.4
3,169,907	-		DZA65_RS14550	0.90	+0.3
3,170,051	-				+0.5
3,170,051	-				+0.4
3,170,053	-				-0.5
3,170,114	+				+0.6
3,170,124	-				+0.0
3,170,124	-				+0.0
3,170,170	+				-0.2
3,170,170	+				-0.5
3,170,170	+				+1.0
3,170,170	+				+1.4
3,170,171	-				-0.2
3,170,171	-				-1.8
3,170,171	-				-1.5
3,170,184	+				-0.5
3,170,185	-				-1.5
3,170,238	-		DZA65_RS14555	0.13	+0.3
3,170,238	-		DZA65_RS14555	0.13	+0.3
3,170,282	+		DZA65_RS14555	0.17	-2.0
3,170,283	-		DZA65_RS14555	0.17	+0.1
3,170,344	+		DZA65_RS14555	0.24	-0.2
3,170,369	+		DZA65_RS14555	0.27	-2.0
3,170,370	-		DZA65_RS14555	0.27	+0.1
3,170,393	+		DZA65_RS14555	0.30	-0.7
3,170,447	+		DZA65_RS14555	0.36	+0.1
3,170,447	+		DZA65_RS14555	0.36	+0.5
3,170,447	+		DZA65_RS14555	0.36	-1.4
3,170,447	+		DZA65_RS14555	0.36	+1.8
3,170,447	+		DZA65_RS14555	0.36	-0.5
3,170,448	-		DZA65_RS14555	0.36	-1.2
3,170,448	-		DZA65_RS14555	0.36	-0.8
3,170,448	-		DZA65_RS14555	0.36	-1.3
3,170,448	-		DZA65_RS14555	0.36	+0.2
3,170,448	-		DZA65_RS14555	0.36	-0.0
3,170,465	+		DZA65_RS14555	0.38	+0.1
3,170,466	-		DZA65_RS14555	0.38	+1.6
3,170,469	+		DZA65_RS14555	0.38	-0.8
3,170,470	-		DZA65_RS14555	0.38	-0.3
3,170,470	-		DZA65_RS14555	0.38	-1.2
3,170,531	+		DZA65_RS14555	0.45	-0.8
3,170,531	+		DZA65_RS14555	0.45	-0.1
3,170,549	+		DZA65_RS14555	0.47	-0.4
3,170,549	+		DZA65_RS14555	0.47	-0.5
3,170,550	-		DZA65_RS14555	0.47	-0.2
3,170,643	+		DZA65_RS14555	0.57	-0.4
3,170,643	+		DZA65_RS14555	0.57	+0.6
3,170,643	+		DZA65_RS14555	0.57	-1.2
3,170,644	-		DZA65_RS14555	0.57	+1.0
3,170,647	+		DZA65_RS14555	0.58	-0.2
3,170,648	-		DZA65_RS14555	0.58	-1.8
3,170,648	-		DZA65_RS14555	0.58	-2.0
3,170,648	-		DZA65_RS14555	0.58	-0.8
3,170,648	-		DZA65_RS14555	0.58	-1.4
3,170,648	-		DZA65_RS14555	0.58	-0.3
3,170,683	+		DZA65_RS14555	0.61	-1.2
3,170,683	+		DZA65_RS14555	0.61	-0.1
3,170,699	+		DZA65_RS14555	0.63	-0.8
3,170,699	+		DZA65_RS14555	0.63	+0.0
3,170,699	+		DZA65_RS14555	0.63	+0.4
3,170,700	-		DZA65_RS14555	0.63	-1.6
3,170,700	-		DZA65_RS14555	0.63	-0.2
3,170,700	-		DZA65_RS14555	0.63	+0.2
3,170,700	-		DZA65_RS14555	0.63	-1.5
3,170,700	-		DZA65_RS14555	0.63	-1.2
3,170,766	+		DZA65_RS14555	0.71	-0.5
3,170,767	-		DZA65_RS14555	0.71	-0.4
3,170,837	+		DZA65_RS14555	0.78	+0.4
3,170,856	+		DZA65_RS14555	0.81	+0.5
3,170,857	-		DZA65_RS14555	0.81	+1.0
3,170,857	-		DZA65_RS14555	0.81	+0.8
3,170,857	-		DZA65_RS14555	0.81	-1.0
3,170,886	-		DZA65_RS14555	0.84	+0.1
3,170,894	-		DZA65_RS14555	0.85	-2.0
3,170,910	+		DZA65_RS14555	0.86	+0.1
3,170,911	-		DZA65_RS14555	0.87	-1.5
3,170,930	+		DZA65_RS14555	0.89	-0.4
3,170,930	+		DZA65_RS14555	0.89	+0.4
3,170,930	+		DZA65_RS14555	0.89	-0.5
3,170,930	+		DZA65_RS14555	0.89	-1.3
3,170,931	-		DZA65_RS14555	0.89	+0.8
3,170,943	+				-1.5
3,170,944	-				-3.0
3,170,952	-				-0.4
3,170,962	+				-1.2
3,170,962	+				-0.4
3,170,963	-				-1.4
3,170,984	+				-0.3
3,170,984	+				-0.5
3,170,985	-				+0.1
3,170,985	-				+0.8
3,170,985	-				+0.4
3,170,986	+				-0.6
3,170,986	+				-0.8
3,170,986	+				-0.2
3,170,986	+				-0.8
3,170,987	-				-1.1