Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06395

Experiment: 1.88mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1.88mM_PTB
1,331,889	+				+1.4
1,331,889	+				-0.6
1,331,889	+				-1.6
1,331,889	+				+1.0
1,331,889	+				-0.2
1,331,890	-				+0.2
1,331,890	-				-1.3
1,331,890	-				-0.3
1,331,890	-				-0.6
1,331,890	-				-0.6
1,331,890	-				-1.0
1,331,916	+				-0.0
1,331,916	+				-0.8
1,331,916	+				-0.8
1,331,916	+				-0.0
1,331,916	+				-0.0
1,331,916	+				-0.6
1,331,916	+				-0.4
1,331,917	-				-0.2
1,331,917	-				+2.0
1,331,917	-				-0.9
1,331,928	+		DZA65_RS06390	0.11	-1.6
1,331,929	-		DZA65_RS06390	0.11	-0.6
1,331,929	-		DZA65_RS06390	0.11	-0.5
1,332,039	+		DZA65_RS06390	0.22	-0.6
1,332,039	+		DZA65_RS06390	0.22	-0.6
1,332,040	-		DZA65_RS06390	0.22	-1.0
1,332,040	-		DZA65_RS06390	0.22	-1.2
1,332,040	-		DZA65_RS06390	0.22	+0.7
1,332,040	-		DZA65_RS06390	0.22	-1.6
1,332,043	+		DZA65_RS06390	0.22	-0.0
1,332,043	+		DZA65_RS06390	0.22	+1.0
1,332,043	+		DZA65_RS06390	0.22	-0.5
1,332,043	+		DZA65_RS06390	0.22	+0.1
1,332,043	+		DZA65_RS06390	0.22	-1.8
1,332,043	+		DZA65_RS06390	0.22	+1.0
1,332,044	-		DZA65_RS06390	0.22	-0.4
1,332,044	-		DZA65_RS06390	0.22	-2.3
1,332,044	-		DZA65_RS06390	0.22	-0.0
1,332,044	-		DZA65_RS06390	0.22	+0.3
1,332,105	+		DZA65_RS06390	0.28	+0.7
1,332,105	+		DZA65_RS06390	0.28	+0.3
1,332,105	+		DZA65_RS06390	0.28	+1.0
1,332,106	-		DZA65_RS06390	0.28	-1.2
1,332,106	-		DZA65_RS06390	0.28	+0.5
1,332,106	-		DZA65_RS06390	0.28	-2.2
1,332,106	-		DZA65_RS06390	0.28	-0.8
1,332,106	-		DZA65_RS06390	0.28	+0.5
1,332,106	-		DZA65_RS06390	0.28	-1.0
1,332,126	+		DZA65_RS06390	0.30	+0.4
1,332,126	+		DZA65_RS06390	0.30	-0.0
1,332,126	+		DZA65_RS06390	0.30	-0.0
1,332,126	+		DZA65_RS06390	0.30	-1.0
1,332,126	+		DZA65_RS06390	0.30	+0.3
1,332,126	+		DZA65_RS06390	0.30	-0.2
1,332,127	-		DZA65_RS06390	0.30	+0.3
1,332,127	-		DZA65_RS06390	0.30	+0.2
1,332,127	-		DZA65_RS06390	0.30	-1.3
1,332,127	-		DZA65_RS06390	0.30	+0.7
1,332,127	-		DZA65_RS06390	0.30	-1.0
1,332,127	-		DZA65_RS06390	0.30	-0.9
1,332,127	-		DZA65_RS06390	0.30	+1.6
1,332,127	-		DZA65_RS06390	0.30	+1.0
1,332,127	-		DZA65_RS06390	0.30	-1.0
1,332,127	-		DZA65_RS06390	0.30	-0.1
1,332,127	-		DZA65_RS06390	0.30	+0.3
1,332,127	-		DZA65_RS06390	0.30	-0.1
1,332,149	+		DZA65_RS06390	0.33	-0.4
1,332,149	+		DZA65_RS06390	0.33	-0.0
1,332,149	+		DZA65_RS06390	0.33	+0.3
1,332,150	-		DZA65_RS06390	0.33	+0.3
1,332,155	+		DZA65_RS06390	0.33	-0.3
1,332,155	+		DZA65_RS06390	0.33	+0.3
1,332,155	+		DZA65_RS06390	0.33	-1.5
1,332,156	-		DZA65_RS06390	0.33	+0.6
1,332,156	-		DZA65_RS06390	0.33	-1.4
1,332,203	-		DZA65_RS06390	0.38	-1.3
1,332,264	+		DZA65_RS06390	0.44	+0.5
1,332,264	+		DZA65_RS06390	0.44	-0.0
1,332,264	+		DZA65_RS06390	0.44	-2.0
1,332,265	-		DZA65_RS06390	0.44	-0.0
1,332,265	-		DZA65_RS06390	0.44	-1.0
1,332,265	-		DZA65_RS06390	0.44	+0.3
1,332,265	-		DZA65_RS06390	0.44	-0.0
1,332,274	+		DZA65_RS06390	0.45	-0.0
1,332,275	-		DZA65_RS06390	0.45	-1.3
1,332,275	-		DZA65_RS06390	0.45	-2.0
1,332,276	+		DZA65_RS06390	0.45	-1.2
1,332,276	+		DZA65_RS06390	0.45	-0.3
1,332,276	+		DZA65_RS06390	0.45	+0.6
1,332,276	+		DZA65_RS06390	0.45	-0.3
1,332,276	+		DZA65_RS06390	0.45	-1.0
1,332,276	+		DZA65_RS06390	0.45	-0.6
1,332,276	+		DZA65_RS06390	0.45	+0.7
1,332,276	+		DZA65_RS06390	0.45	-0.3
1,332,276	+		DZA65_RS06390	0.45	-0.3
1,332,277	-		DZA65_RS06390	0.45	-0.4
1,332,277	-		DZA65_RS06390	0.45	-1.5
1,332,277	-		DZA65_RS06390	0.45	-0.4
1,332,277	-		DZA65_RS06390	0.45	-0.4
1,332,277	-		DZA65_RS06390	0.45	-0.0
1,332,277	-		DZA65_RS06390	0.45	-0.8
1,332,277	-		DZA65_RS06390	0.45	-0.2
1,332,277	-		DZA65_RS06390	0.45	+0.4
1,332,277	-		DZA65_RS06390	0.45	-1.8
1,332,277	-		DZA65_RS06390	0.45	+2.2
1,332,277	-		DZA65_RS06390	0.45	-1.8
1,332,372	+		DZA65_RS06390	0.55	-0.8
1,332,372	+		DZA65_RS06390	0.55	+2.4
1,332,372	+		DZA65_RS06390	0.55	-0.4
1,332,372	+		DZA65_RS06390	0.55	-1.7
1,332,373	-		DZA65_RS06390	0.55	+0.8
1,332,373	-		DZA65_RS06390	0.55	-1.3
1,332,373	-		DZA65_RS06390	0.55	-0.0
1,332,373	-		DZA65_RS06390	0.55	-0.4
1,332,373	-		DZA65_RS06390	0.55	+0.1
1,332,373	-				-1.3
1,332,373	-		DZA65_RS06390	0.55	+0.3
1,332,376	-		DZA65_RS06390	0.55	-0.0
1,332,376	-		DZA65_RS06390	0.55	-0.6
1,332,376	-		DZA65_RS06390	0.55	-0.3
1,332,376	-		DZA65_RS06390	0.55	-0.0
1,332,394	-				-1.0
1,332,394	-		DZA65_RS06390	0.57	+1.2
1,332,394	-		DZA65_RS06390	0.57	-0.6
1,332,394	-		DZA65_RS06390	0.57	-0.9
1,332,394	-		DZA65_RS06390	0.57	+2.0
1,332,570	-		DZA65_RS06390	0.74	+1.0
1,332,668	-		DZA65_RS06390	0.84	-0.3
1,332,719	-		DZA65_RS06390	0.89	-0.0
1,332,719	-		DZA65_RS06390	0.89	-1.2
1,332,739	+				+1.6
1,332,742	+				-0.5
1,332,742	+				-1.6
1,332,743	-				-0.4
1,332,743	-				+1.2
1,332,743	-				-2.0
1,332,743	-				-1.0
1,332,743	-				+0.3
1,332,745	+				+1.0
1,332,745	+				-0.6
1,332,745	+				-0.8
1,332,745	+				-1.5
1,332,745	+				+0.7
1,332,746	-				-1.6
1,332,746	-				-0.2
1,332,746	-				-0.0
1,332,746	-				-0.6
1,332,746	-				-0.5
1,332,746	-				+0.4
1,332,774	+				+1.0
1,332,775	-				-0.2
1,332,775	-				-0.7
1,332,820	+				-0.4
1,332,820	+				-0.2
1,332,820	+				+0.7
1,332,821	-				-2.2
1,332,821	-				-1.3
1,332,821	-				-0.3
1,332,832	+				-0.0
1,332,851	-				+1.0
1,332,858	+				+0.4
1,332,859	-				+0.7
1,332,867	+				-2.0
1,332,868	-				-0.2
1,332,929	+				-0.0
1,332,930	-				-0.6
1,333,033	+		DZA65_RS06395	0.12	-1.8
1,333,261	+		DZA65_RS06395	0.27	-0.1
1,333,261	+		DZA65_RS06395	0.27	-0.0
1,333,261	+		DZA65_RS06395	0.27	-0.0
1,333,261	+		DZA65_RS06395	0.27	+0.3
1,333,262	-		DZA65_RS06395	0.27	+1.0
1,333,262	-		DZA65_RS06395	0.27	-0.4
1,333,262	-		DZA65_RS06395	0.27	+0.2
1,333,312	+		DZA65_RS06395	0.30	-1.8
1,333,312	+		DZA65_RS06395	0.30	-0.5
1,333,312	+		DZA65_RS06395	0.30	-0.0
1,333,312	+		DZA65_RS06395	0.30	-1.9
1,333,312	+		DZA65_RS06395	0.30	-0.3
1,333,312	+		DZA65_RS06395	0.30	-0.7
1,333,312	+		DZA65_RS06395	0.30	-1.6
1,333,313	-		DZA65_RS06395	0.31	+0.2
1,333,313	-		DZA65_RS06395	0.31	-0.3
1,333,313	-		DZA65_RS06395	0.31	-0.3
1,333,313	-		DZA65_RS06395	0.31	-0.7
1,333,313	-		DZA65_RS06395	0.31	-1.3
1,333,313	-		DZA65_RS06395	0.31	+1.0
1,333,313	-		DZA65_RS06395	0.31	+0.7
1,333,313	-		DZA65_RS06395	0.31	+3.3
1,333,313	-		DZA65_RS06395	0.31	-0.6
1,333,313	-		DZA65_RS06395	0.31	-0.9
1,333,313	-		DZA65_RS06395	0.31	+0.6
1,333,379	+		DZA65_RS06395	0.35	+0.4
1,333,380	-		DZA65_RS06395	0.35	-0.5
1,333,416	-		DZA65_RS06395	0.37	-0.1
1,333,578	+		DZA65_RS06395	0.48	-0.5
1,333,578	+		DZA65_RS06395	0.48	+1.4
1,333,578	+		DZA65_RS06395	0.48	+0.6
1,333,579	-		DZA65_RS06395	0.48	+0.4
1,333,579	-		DZA65_RS06395	0.48	-1.5
1,333,579	-		DZA65_RS06395	0.48	-0.6
1,333,659	-		DZA65_RS06395	0.53	+0.6
1,333,707	+		DZA65_RS06395	0.56	+0.6
1,333,707	+		DZA65_RS06395	0.56	-0.0
1,333,708	-		DZA65_RS06395	0.56	-0.1
1,333,708	-		DZA65_RS06395	0.56	+0.1
1,333,725	+		DZA65_RS06395	0.58	-0.7
1,333,725	+		DZA65_RS06395	0.58	-0.8
1,333,725	+		DZA65_RS06395	0.58	-0.0
1,333,725	+		DZA65_RS06395	0.58	+1.0
1,333,725	+		DZA65_RS06395	0.58	+0.4
1,333,725	+		DZA65_RS06395	0.58	-1.8
1,333,725	+		DZA65_RS06395	0.58	+1.0
1,333,726	-		DZA65_RS06395	0.58	-0.0
1,333,726	-		DZA65_RS06395	0.58	+1.0
1,333,726	-		DZA65_RS06395	0.58	-1.4
1,333,726	-		DZA65_RS06395	0.58	-2.0
1,333,726	-		DZA65_RS06395	0.58	-1.8
1,333,726	-		DZA65_RS06395	0.58	-1.0
1,333,726	-		DZA65_RS06395	0.58	-1.5
1,333,726	-		DZA65_RS06395	0.58	+0.1
1,333,726	-		DZA65_RS06395	0.58	+0.3
1,333,726	-		DZA65_RS06395	0.58	-0.3
1,333,726	-		DZA65_RS06395	0.58	+0.4
1,333,726	-		DZA65_RS06395	0.58	-0.4
1,333,726	-		DZA65_RS06395	0.58	-0.2
1,333,726	-		DZA65_RS06395	0.58	-1.6
1,333,759	+		DZA65_RS06395	0.60	-0.5
1,333,759	+		DZA65_RS06395	0.60	-0.8
1,333,759	+		DZA65_RS06395	0.60	-2.0
1,333,759	+		DZA65_RS06395	0.60	-1.0
1,333,759	+		DZA65_RS06395	0.60	-1.0
1,333,759	+		DZA65_RS06395	0.60	-2.0
1,333,759	+		DZA65_RS06395	0.60	-2.2
1,333,759	+		DZA65_RS06395	0.60	-1.4
1,333,759	+		DZA65_RS06395	0.60	-0.2
1,333,760	-		DZA65_RS06395	0.60	-1.0
1,333,760	-		DZA65_RS06395	0.60	-0.8
1,333,760	-		DZA65_RS06395	0.60	-1.3
1,333,760	-		DZA65_RS06395	0.60	-0.3
1,333,760	-		DZA65_RS06395	0.60	+1.6
1,333,800	-		DZA65_RS06395	0.63	+0.4
1,333,873	+		DZA65_RS06395	0.67	-1.1
1,333,873	+		DZA65_RS06395	0.67	-0.3
1,333,873	+		DZA65_RS06395	0.67	-1.1
1,333,990	+		DZA65_RS06395	0.75	-1.8
1,333,990	+		DZA65_RS06395	0.75	-1.4
1,333,991	-		DZA65_RS06395	0.75	+0.1
1,334,049	-		DZA65_RS06395	0.79	-1.5
1,334,096	+		DZA65_RS06395	0.82	-1.5
1,334,096	+		DZA65_RS06395	0.82	+0.1
1,334,096	+		DZA65_RS06395	0.82	+0.5
1,334,096	+		DZA65_RS06395	0.82	-0.0
1,334,096	+		DZA65_RS06395	0.82	-0.0
1,334,097	-		DZA65_RS06395	0.82	-0.6
1,334,097	-		DZA65_RS06395	0.82	+0.2
1,334,097	-		DZA65_RS06395	0.82	+0.4
1,334,097	-		DZA65_RS06395	0.82	-0.0
1,334,097	-		DZA65_RS06395	0.82	-0.0
1,334,100	+		DZA65_RS06395	0.82	+1.0
1,334,100	+		DZA65_RS06395	0.82	+0.4
1,334,100	+		DZA65_RS06395	0.82	-1.2
1,334,100	+		DZA65_RS06395	0.82	+0.1
1,334,100	+				-0.0
1,334,100	+		DZA65_RS06395	0.82	+0.2
1,334,100	+		DZA65_RS06395	0.82	-1.3
1,334,100	+		DZA65_RS06395	0.82	-1.0
1,334,101	-		DZA65_RS06395	0.82	-2.2
1,334,101	-		DZA65_RS06395	0.82	-0.6
1,334,101	-		DZA65_RS06395	0.82	+0.7
1,334,101	-		DZA65_RS06395	0.82	-0.2
1,334,101	-		DZA65_RS06395	0.82	-1.0
1,334,101	-		DZA65_RS06395	0.82	-1.3
1,334,101	-		DZA65_RS06395	0.82	-0.5
1,334,206	-		DZA65_RS06395	0.89	+0.2
1,334,279	+				+0.4
1,334,292	+				-1.0
1,334,292	+				-1.2
1,334,293	-				-0.3
1,334,293	-				-0.6
1,334,309	+				-1.0
1,334,310	-				-0.6
1,334,310	-				-0.2
1,334,352	+				-1.2
1,334,353	-				-1.3
1,334,353	-				+0.3
1,334,353	-				-0.0
1,334,369	+				-0.7
1,334,369	+				-0.3
1,334,369	+				-1.0
1,334,369	+				-1.6
1,334,369	+				-1.0
1,334,369	+				+0.2
1,334,369	+				-0.8
1,334,369	+				+1.0
1,334,369	+				+1.0
1,334,369	+				-0.8
1,334,369	+				-1.3
1,334,369	+				-0.9
1,334,369	+				-0.5
1,334,369	+				-0.3
1,334,370	-				-0.4
1,334,370	-				-1.3
1,334,370	-				+2.0
1,334,370	-				-0.0
1,334,370	-				-0.0
1,334,370	-				-1.0
1,334,370	-				+0.4
1,334,370	-				-0.3
1,334,370	-				-1.0
1,334,370	-				+0.2
1,334,370	-				-0.0
1,334,370	-				-0.3
1,334,371	+				+0.1
1,334,371	+				-0.3
1,334,371	+				+0.2
1,334,371	+				-0.4
1,334,371	+				+1.7
1,334,371	+				-0.7
1,334,371	+				-0.8
1,334,371	+				+1.3
1,334,371	+				-0.3
1,334,371	+				-1.3
1,334,371	+				-0.9
1,334,371	+				-2.2
1,334,371	+				-0.3
1,334,371	+				+0.2
1,334,372	-				-1.3
1,334,372	-				-0.7
1,334,372	-				-0.2
1,334,372	-				-0.2
1,334,372	-				-1.6
1,334,372	-				-1.3
1,334,372	-				-1.6
1,334,372	-				-0.0
1,334,372	-				-0.6
1,334,372	-				+0.4
1,334,372	-				-1.0
1,334,372	-				-0.8
1,334,372	-				-0.6
1,334,372	-				-0.7
1,334,372	-				-1.3
1,334,372	-				-0.2
1,334,374	+				-1.8
1,334,374	+				+0.5
1,334,374	+				-1.5
1,334,374	+				-0.0
1,334,375	-				-1.3
1,334,375	-				-0.8
1,334,387	+				-0.1
1,334,387	+				+0.1
1,334,387	+				-0.6
1,334,388	-				-1.8
1,334,388	-				-0.3
1,334,388	-				-1.8
1,334,388	-				-0.2
1,334,391	+				+0.1
1,334,391	+				-0.0
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1,334,493	-				-0.8
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1,334,493	-				+1.0
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1,334,548	+				-0.2
1,334,548	+				-1.6
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1,334,549	-				+0.2
1,334,549	-				-0.1
1,334,549	-				-0.0
1,334,739	+		DZA65_RS06400	0.25	-0.0
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1,334,739	+		DZA65_RS06400	0.25	-0.0
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1,334,937	-		DZA65_RS06400	0.45	-1.0
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1,335,082	-		DZA65_RS06400	0.59	-1.4
1,335,098	+				-0.0
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1,335,098	+		DZA65_RS06400	0.61	+0.1
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1,335,099	-		DZA65_RS06400	0.61	-0.5
1,335,099	-		DZA65_RS06400	0.61	-1.7
1,335,102	-		DZA65_RS06400	0.61	-1.3
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1,335,114	-		DZA65_RS06400	0.63	-0.2
1,335,114	-		DZA65_RS06400	0.63	+1.7
1,335,147	+		DZA65_RS06400	0.66	+1.0
1,335,147	+		DZA65_RS06400	0.66	+0.6
1,335,148	-		DZA65_RS06400	0.66	+0.5
1,335,247	-		DZA65_RS06400	0.76	-1.0
1,335,262	+		DZA65_RS06400	0.77	+0.4
1,335,348	+		DZA65_RS06400	0.86	-0.6
1,335,369	+		DZA65_RS06400	0.88	+0.3
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1,335,369	+		DZA65_RS06400	0.88	-1.0
1,335,369	+		DZA65_RS06400	0.88	-0.2
1,335,369	+		DZA65_RS06400	0.88	-0.6
1,335,369	+		DZA65_RS06400	0.88	-1.6
1,335,369	+		DZA65_RS06400	0.88	-0.0