Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18660

Experiment: 1.88mM_PTB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1.88mM_PTB
4,018,385	+		DZA65_RS18650	0.88	+1.0
4,018,386	-		DZA65_RS18650	0.88	-1.3
4,018,446	+				+0.5
4,018,464	+				+0.0
4,018,464	+				-1.1
4,018,465	-				+0.0
4,018,465	-				+0.4
4,018,507	-				+0.4
4,018,507	-				+1.6
4,018,507	-				+1.0
4,018,507	-				-1.0
4,018,545	+				-1.8
4,018,546	-				-0.1
4,018,546	-				-2.1
4,018,546	-				-1.3
4,018,546	-				-1.3
4,018,546	-				-1.0
4,018,546	-				+0.0
4,018,546	-				+0.3
4,018,559	+				+0.6
4,018,559	+				-3.2
4,018,559	+				-0.2
4,018,559	+				-0.5
4,018,581	+				+0.4
4,018,581	+				+1.0
4,018,582	-				+0.8
4,018,582	-				+0.2
4,018,582	-				-0.6
4,018,597	+				+1.8
4,018,597	+				-0.1
4,018,597	+				-0.2
4,018,598	-				+0.6
4,018,599	+				-1.8
4,018,599	+				-0.3
4,018,599	+				+0.4
4,018,599	+				-1.3
4,018,599	+				+1.0
4,018,599	+				-0.8
4,018,599	+				-0.2
4,018,599	+				-0.2
4,018,600	-				-1.6
4,018,600	-				-1.0
4,018,600	-				+0.4
4,018,600	-				+0.0
4,018,686	+				+0.1
4,018,686	+				-0.2
4,018,687	-				-0.3
4,018,687	-				+0.5
4,018,693	+				-0.8
4,018,694	-				+1.0
4,018,701	+				-0.8
4,018,701	+				-0.1
4,018,701	+				+1.3
4,018,701	+				-0.7
4,018,702	-				-0.6
4,018,702	-				+0.4
4,018,702	-				+0.6
4,018,702	-				+1.0
4,018,703	+				+0.0
4,018,703	+				+0.0
4,018,703	+				+0.0
4,018,703	+				+0.1
4,018,703	+				-0.5
4,018,703	+				+1.0
4,018,703	+				+0.4
4,018,703	+				-0.5
4,018,704	-				-0.3
4,018,704	-				-0.1
4,018,704	-				-1.0
4,018,704	-				+0.0
4,018,704	-				-1.3
4,018,704	-				-0.4
4,018,704	-				+0.0
4,018,704	-				-0.5
4,018,704	-				+1.6
4,018,819	-		DZA65_RS18655	0.49	-0.2
4,018,859	-		DZA65_RS18655	0.65	+1.0
4,018,876	-		DZA65_RS18655	0.72	+0.0
4,018,947	+				-1.6
4,018,948	-				+0.5
4,018,948	-				+0.6
4,019,038	-				-0.4
4,019,144	+				+0.1
4,019,148	+				+0.8
4,019,149	-				+0.8
4,019,154	+				+0.2
4,019,154	+				+0.2
4,019,155	-				-0.2
4,019,168	+				+0.2
4,019,168	+				-1.1
4,019,168	+				+0.6
4,019,228	+				+1.2
4,019,270	+		DZA65_RS18660	0.11	-0.8
4,019,270	+		DZA65_RS18660	0.11	+0.4
4,019,270	+		DZA65_RS18660	0.11	-0.7
4,019,270	+		DZA65_RS18660	0.11	-0.0
4,019,270	+		DZA65_RS18660	0.11	+1.2
4,019,270	+		DZA65_RS18660	0.11	-1.8
4,019,270	+		DZA65_RS18660	0.11	+0.3
4,019,270	+		DZA65_RS18660	0.11	-0.2
4,019,270	+		DZA65_RS18660	0.11	-0.6
4,019,270	+		DZA65_RS18660	0.11	-0.1
4,019,270	+		DZA65_RS18660	0.11	-0.8
4,019,270	+		DZA65_RS18660	0.11	+1.6
4,019,270	+		DZA65_RS18660	0.11	+0.0
4,019,270	+		DZA65_RS18660	0.11	-1.6
4,019,270	+		DZA65_RS18660	0.11	+0.3
4,019,270	+		DZA65_RS18660	0.11	-0.7
4,019,271	-		DZA65_RS18660	0.11	-0.4
4,019,271	-		DZA65_RS18660	0.11	+0.4
4,019,271	-		DZA65_RS18660	0.11	+0.3
4,019,271	-		DZA65_RS18660	0.11	-0.6
4,019,271	-		DZA65_RS18660	0.11	-1.6
4,019,271	-		DZA65_RS18660	0.11	+1.4
4,019,271	-		DZA65_RS18660	0.11	+0.4
4,019,271	-		DZA65_RS18660	0.11	+0.2
4,019,271	-		DZA65_RS18660	0.11	-1.8
4,019,271	-		DZA65_RS18660	0.11	-0.6
4,019,271	-		DZA65_RS18660	0.11	+0.0
4,019,271	-		DZA65_RS18660	0.11	+1.0
4,019,271	-		DZA65_RS18660	0.11	-0.2
4,019,271	-		DZA65_RS18660	0.11	-0.8
4,019,271	-		DZA65_RS18660	0.11	+2.0
4,019,272	+		DZA65_RS18660	0.11	+2.2
4,019,272	+		DZA65_RS18660	0.11	-0.3
4,019,272	+		DZA65_RS18660	0.11	-0.3
4,019,272	+		DZA65_RS18660	0.11	+0.0
4,019,272	+		DZA65_RS18660	0.11	+0.2
4,019,272	+		DZA65_RS18660	0.11	+0.4
4,019,272	+				+0.0
4,019,273	-		DZA65_RS18660	0.11	+1.4
4,019,273	-		DZA65_RS18660	0.11	+0.0
4,019,273	-		DZA65_RS18660	0.11	-0.6
4,019,273	-		DZA65_RS18660	0.11	-1.8
4,019,273	-		DZA65_RS18660	0.11	+0.7
4,019,273	-		DZA65_RS18660	0.11	-0.1
4,019,273	-		DZA65_RS18660	0.11	-0.7
4,019,273	-		DZA65_RS18660	0.11	-0.1
4,019,273	-		DZA65_RS18660	0.11	-0.3
4,019,273	-		DZA65_RS18660	0.11	+1.6
4,019,273	-		DZA65_RS18660	0.11	+0.0
4,019,273	-		DZA65_RS18660	0.11	+0.9
4,019,273	-		DZA65_RS18660	0.11	+1.0
4,019,306	+		DZA65_RS18660	0.15	-0.6
4,019,306	+		DZA65_RS18660	0.15	-1.0
4,019,306	+		DZA65_RS18660	0.15	+1.0
4,019,306	+		DZA65_RS18660	0.15	-2.1
4,019,306	+		DZA65_RS18660	0.15	-0.3
4,019,306	+		DZA65_RS18660	0.15	-1.3
4,019,307	-		DZA65_RS18660	0.15	+0.4
4,019,307	-		DZA65_RS18660	0.15	-0.6
4,019,307	-		DZA65_RS18660	0.15	-0.3
4,019,307	-		DZA65_RS18660	0.15	+0.4
4,019,307	-		DZA65_RS18660	0.15	-0.6
4,019,307	-		DZA65_RS18660	0.15	+1.0
4,019,322	-		DZA65_RS18660	0.17	+0.7
4,019,378	+		DZA65_RS18660	0.25	-1.1
4,019,378	+		DZA65_RS18660	0.25	-1.3
4,019,378	+		DZA65_RS18660	0.25	+1.0
4,019,378	+		DZA65_RS18660	0.25	-0.4
4,019,379	-		DZA65_RS18660	0.25	-0.2
4,019,379	-		DZA65_RS18660	0.25	+0.6
4,019,401	-		DZA65_RS18660	0.28	+0.3
4,019,442	+		DZA65_RS18660	0.33	-0.4
4,019,442	+		DZA65_RS18660	0.33	-0.6
4,019,442	+		DZA65_RS18660	0.33	+0.7
4,019,443	-		DZA65_RS18660	0.33	-0.2
4,019,475	+		DZA65_RS18660	0.37	+0.2
4,019,475	+		DZA65_RS18660	0.37	+0.4
4,019,475	+		DZA65_RS18660	0.37	-0.1
4,019,475	+		DZA65_RS18660	0.37	-0.3
4,019,475	+		DZA65_RS18660	0.37	+0.2
4,019,475	+		DZA65_RS18660	0.37	-0.5
4,019,479	+		DZA65_RS18660	0.38	-1.0
4,019,480	-		DZA65_RS18660	0.38	+0.7
4,019,480	-		DZA65_RS18660	0.38	-0.9
4,019,480	-				-1.8
4,019,480	-		DZA65_RS18660	0.38	-0.3
4,019,480	-		DZA65_RS18660	0.38	-2.1
4,019,480	-		DZA65_RS18660	0.38	+0.0
4,019,480	-		DZA65_RS18660	0.38	+0.4
4,019,548	-		DZA65_RS18660	0.47	+0.7
4,019,548	-		DZA65_RS18660	0.47	-0.7
4,019,567	+		DZA65_RS18660	0.49	+0.2
4,019,735	-		DZA65_RS18660	0.71	+0.0
4,019,828	+		DZA65_RS18660	0.83	-1.6
4,019,828	+		DZA65_RS18660	0.83	+0.3
4,019,837	+		DZA65_RS18660	0.85	-0.4
4,019,838	-		DZA65_RS18660	0.85	+0.6
4,019,838	-		DZA65_RS18660	0.85	-2.4
4,019,854	+		DZA65_RS18660	0.87	-0.6
4,019,854	+		DZA65_RS18660	0.87	-2.1
4,019,854	+		DZA65_RS18660	0.87	-0.1
4,019,854	+		DZA65_RS18660	0.87	+0.0
4,019,854	+		DZA65_RS18660	0.87	-0.0
4,019,855	-		DZA65_RS18660	0.87	+0.8
4,019,855	-		DZA65_RS18660	0.87	-0.3
4,019,855	-		DZA65_RS18660	0.87	+0.5
4,019,855	-		DZA65_RS18660	0.87	+0.3
4,019,860	+		DZA65_RS18660	0.88	+0.2
4,019,860	+		DZA65_RS18660	0.88	+0.4
4,019,926	+				-0.4
4,020,060	+				-0.3
4,020,063	-				-0.6
4,020,063	-				-1.0
4,020,176	+				-0.3
4,020,200	+				+0.4
4,020,213	-				+0.0
4,020,250	-				+0.1
4,020,250	-				+0.2
4,020,256	+				-0.3
4,020,580	+		DZA65_RS18665	0.24	+0.3
4,020,580	+		DZA65_RS18665	0.24	-1.3
4,020,580	+		DZA65_RS18665	0.24	-0.9
4,020,581	-				+1.0
4,020,721	+		DZA65_RS18665	0.34	-1.4
4,020,721	+		DZA65_RS18665	0.34	+0.0
4,020,722	-		DZA65_RS18665	0.34	+1.6
4,020,722	-		DZA65_RS18665	0.34	-0.3
4,020,722	-		DZA65_RS18665	0.34	+0.0
4,020,795	-		DZA65_RS18665	0.39	+0.7
4,020,856	+		DZA65_RS18665	0.44	+4.0
4,020,857	-		DZA65_RS18665	0.44	+0.6
4,020,889	+		DZA65_RS18665	0.46	-0.6
4,020,889	+		DZA65_RS18665	0.46	-1.3
4,020,889	+		DZA65_RS18665	0.46	-0.4
4,020,889	+		DZA65_RS18665	0.46	+0.8
4,020,889	+		DZA65_RS18665	0.46	-2.4
4,020,890	-		DZA65_RS18665	0.46	+1.0
4,020,890	-		DZA65_RS18665	0.46	-0.6
4,020,890	-		DZA65_RS18665	0.46	+0.3
4,020,890	-		DZA65_RS18665	0.46	+0.5
4,020,890	-		DZA65_RS18665	0.46	+1.0
4,020,890	-		DZA65_RS18665	0.46	-0.4
4,020,890	-		DZA65_RS18665	0.46	-0.2
4,020,890	-		DZA65_RS18665	0.46	-0.2
4,020,907	+		DZA65_RS18665	0.47	-1.0
4,020,907	+		DZA65_RS18665	0.47	-0.6
4,020,935	+		DZA65_RS18665	0.49	+1.6