Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,504,592	-		DZA65_RS20860	0.86	-1.2
4,504,613	+		DZA65_RS20860	0.87	-1.4
4,504,613	+				-0.1
4,504,613	+		DZA65_RS20860	0.87	-0.8
4,504,613	+		DZA65_RS20860	0.87	+1.2
4,504,614	-		DZA65_RS20860	0.87	-1.2
4,504,802	+				+0.8
4,504,877	+				-0.2
4,504,877	+				-0.4
4,504,963	+				-1.3
4,504,963	+				-0.8
4,504,963	+				+0.5
4,504,963	+				+0.7
4,504,964	-				-0.2
4,504,964	-				+2.2
4,504,981	+				-1.4
4,504,981	+				-0.2
4,504,982	-				-0.2
4,504,982	-				-0.8
4,504,982	-				+1.2
4,504,998	+				-1.2
4,504,999	-				+0.8
4,505,007	+				-0.8
4,505,008	-				-0.1
4,505,008	-				-0.2
4,505,008	-				+1.2
4,505,008	-				+1.2
4,505,008	-				+0.6
4,505,008	-				-0.3
4,505,021	-				+0.2
4,505,072	+				+0.2
4,505,072	+				+1.8
4,505,073	-				-0.1
4,505,073	-				-1.2
4,505,073	-				+0.8
4,505,477	+		DZA65_RS20865	0.60	+0.8
4,505,478	-		DZA65_RS20865	0.60	+0.3
4,505,746	+				-0.1
4,505,746	+				+0.2
4,505,746	+				-0.3
4,505,746	+				+1.2
4,505,746	+				+0.0
4,505,746	+				+0.2
4,505,746	+				-0.4
4,505,746	+				-0.1
4,505,746	+				-0.4
4,505,746	+				-0.2
4,505,747	-				-1.5
4,505,747	-				-0.9
4,505,747	-				-1.2
4,505,778	+				-3.2
4,505,779	-				-0.3
4,505,779	-				-1.0
4,505,779	-				-1.7
4,505,779	-				-0.2
4,505,791	+				+0.2
4,505,791	+				-0.6
4,505,791	+				-0.2
4,505,791	+				+0.2
4,505,791	+				-0.6
4,505,791	+				+0.6
4,505,791	+				+0.4
4,505,791	+				+0.2
4,505,791	+				+0.8
4,505,791	+				-1.2
4,505,791	+				-0.7
4,505,791	+				-0.3
4,505,791	+				-0.3
4,505,792	-				+0.2
4,505,792	-				-1.1
4,505,792	-				-0.9
4,505,792	-				-0.9
4,505,792	-				-1.3
4,505,792	-				-0.3
4,505,792	-				-1.8
4,505,792	-				+0.2
4,505,792	-				-0.8
4,505,792	-				-0.2
4,505,792	-				+0.2
4,505,792	-				+0.2
4,505,792	-				+0.2
4,505,793	+				-2.0
4,505,793	+				-1.4
4,505,793	+				-1.5
4,505,793	+				-0.2
4,505,793	+				+0.2
4,505,793	+				-0.2
4,505,794	-				+0.3
4,505,794	-				+0.2
4,505,794	-				+2.2
4,505,794	-				-0.4
4,505,794	-				-0.8
4,505,911	+				-0.6
4,505,911	+				-0.2
4,505,912	-				-2.1
4,505,916	+				-1.4
4,505,916	+				-0.0
4,505,916	+				+0.7
4,506,012	-		DZA65_RS20870	0.20	-0.8
4,506,329	-		DZA65_RS20870	0.64	+1.2
4,506,361	-		DZA65_RS20870	0.69	+1.0
4,506,467	+		DZA65_RS20870	0.83	+1.2
4,506,467	+		DZA65_RS20870	0.83	+0.8
4,506,468	-		DZA65_RS20870	0.84	-0.2
4,506,468	-		DZA65_RS20870	0.84	+0.8
4,506,468	-		DZA65_RS20870	0.84	+0.6
4,506,527	+				+0.4
4,506,566	+				-1.4
4,506,567	-				+0.2
4,506,601	+				-0.6
4,506,602	-				-0.9
4,506,602	-				-0.1
4,506,627	+				-0.4
4,506,627	+				-0.5
4,506,628	-				+0.6
4,506,635	+				-1.0
4,506,635	+				-0.2
4,506,635	+				-0.3
4,506,769	-		DZA65_RS20875	0.22	-0.8