Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12950

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,775,672	+				-0.3
2,775,677	-				-0.5
2,775,677	-				-0.3
2,775,679	+				+0.1
2,775,680	-				+0.5
2,775,740	+				+0.8
2,775,740	+				-1.4
2,775,741	-				-0.7
2,775,741	-				+0.0
2,775,913	+		DZA65_RS12945	0.28	-1.2
2,775,914	-		DZA65_RS12945	0.28	+0.8
2,776,009	+		DZA65_RS12945	0.43	-0.8
2,776,010	-		DZA65_RS12945	0.43	-0.6
2,776,010	-		DZA65_RS12945	0.43	-1.4
2,776,255	+		DZA65_RS12945	0.80	+0.0
2,776,255	+		DZA65_RS12945	0.80	+0.6
2,776,256	-		DZA65_RS12945	0.80	+0.2
2,776,256	-		DZA65_RS12945	0.80	-2.2
2,776,256	-		DZA65_RS12945	0.80	-1.0
2,776,276	+		DZA65_RS12945	0.83	+1.0
2,776,277	-		DZA65_RS12945	0.83	-0.6
2,776,277	-		DZA65_RS12945	0.83	-0.2
2,776,277	-		DZA65_RS12945	0.83	-0.6
2,776,390	+				+0.2
2,776,390	+				-1.0
2,776,390	+				-1.2
2,776,390	+				-1.8
2,776,391	-				-1.0
2,776,396	-				+0.6
2,776,396	-				+1.1
2,776,396	-				+0.8
2,776,466	+				+0.4
2,776,467	-				+1.8
2,776,467	-				+0.0
2,776,470	+				+0.3
2,776,470	+				-0.3
2,776,470	+				-0.6
2,776,471	-				-1.2
2,776,471	-				-0.7
2,776,472	+				+0.3
2,776,473	-				-0.2
2,776,473	-				+1.8
2,776,510	+				+0.2
2,776,538	-				+0.0
2,776,543	+				+1.0
2,776,544	-				-0.8
2,776,544	-				-0.2
2,776,675	-				+1.2
2,776,760	+		DZA65_RS12950	0.15	+1.8
2,776,760	+		DZA65_RS12950	0.15	-0.8
2,776,760	+				-0.2
2,776,760	+		DZA65_RS12950	0.15	-0.8
2,776,760	+		DZA65_RS12950	0.15	-0.1
2,776,761	-		DZA65_RS12950	0.15	-0.8
2,776,761	-		DZA65_RS12950	0.15	-1.2
2,776,761	-		DZA65_RS12950	0.15	-1.0
2,776,761	-		DZA65_RS12950	0.15	+1.8
2,776,865	-		DZA65_RS12950	0.25	-0.5
2,776,985	+		DZA65_RS12950	0.36	-0.2
2,777,267	+		DZA65_RS12950	0.64	-0.8
2,777,267	+		DZA65_RS12950	0.64	-0.2
2,777,268	-		DZA65_RS12950	0.64	+0.2
2,777,268	-		DZA65_RS12950	0.64	-1.0
2,777,268	-		DZA65_RS12950	0.64	+3.1
2,777,268	-		DZA65_RS12950	0.64	+0.8
2,777,360	-		DZA65_RS12950	0.73	-1.2
2,777,467	+		DZA65_RS12950	0.83	-0.7
2,777,467	+		DZA65_RS12950	0.83	-0.7
2,777,467	+		DZA65_RS12950	0.83	-0.8
2,777,467	+		DZA65_RS12950	0.83	-0.6
2,777,516	-		DZA65_RS12950	0.88	+0.2
2,777,524	+		DZA65_RS12950	0.89	-0.0
2,777,524	+		DZA65_RS12950	0.89	-0.8
2,777,524	+		DZA65_RS12950	0.89	+0.1
2,777,525	-		DZA65_RS12950	0.89	-1.6
2,777,525	-		DZA65_RS12950	0.89	-0.2
2,777,552	+				-1.1
2,777,552	+				-0.8
2,777,552	+				-0.5
2,777,552	+				-1.2
2,777,552	+				-0.8
2,777,552	+				-0.3
2,777,552	+				+2.0
2,777,552	+				+0.5
2,777,553	-				+1.8
2,777,553	-				-0.2
2,777,553	-				+1.8
2,777,553	-				+0.0
2,777,655	+				+0.3
2,777,655	+				-0.4
2,777,656	-				+2.3
2,777,656	-				+0.8
2,777,691	+				-0.4
2,777,700	+				-0.2
2,777,700	+				-0.2
2,777,700	+				+0.3
2,777,700	+				+0.3
2,777,700	+				+1.1
2,777,700	+				-0.7
2,777,700	+				+0.8
2,777,700	+				-0.2
2,777,700	+				+0.8
2,777,701	-				-0.5
2,777,703	-				-1.0
2,777,728	+				+1.2
2,777,728	+				-1.1
2,777,728	+				-0.0
2,777,862	+				-2.0
2,777,862	+				-1.0
2,777,869	+				-0.8
2,777,911	+		DZA65_RS12955	0.11	+0.8
2,778,121	+		DZA65_RS12955	0.23	-0.1
2,778,121	+		DZA65_RS12955	0.23	+0.3
2,778,121	+		DZA65_RS12955	0.23	+0.8
2,778,204	+		DZA65_RS12955	0.28	+0.3
2,778,204	+		DZA65_RS12955	0.28	-0.2
2,778,231	-		DZA65_RS12955	0.29	-0.7
2,778,416	+		DZA65_RS12955	0.40	-0.5
2,778,416	+		DZA65_RS12955	0.40	-1.2
2,778,416	+		DZA65_RS12955	0.40	-1.2
2,778,416	+		DZA65_RS12955	0.40	+0.7
2,778,629	+		DZA65_RS12955	0.53	-1.2
2,778,629	+		DZA65_RS12955	0.53	-0.1