Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10780

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,280,635	-		DZA65_RS10775	0.62	-1.8
2,280,665	+				+0.7
2,280,666	-		DZA65_RS10775	0.63	-1.3
2,280,727	+		DZA65_RS10775	0.67	-1.0
2,280,728	-		DZA65_RS10775	0.67	-2.6
2,280,728	-		DZA65_RS10775	0.67	-0.3
2,280,728	-		DZA65_RS10775	0.67	+0.1
2,280,784	+		DZA65_RS10775	0.70	+0.7
2,280,785	-		DZA65_RS10775	0.70	-0.6
2,280,785	-		DZA65_RS10775	0.70	-0.3
2,280,787	+		DZA65_RS10775	0.70	-0.8
2,280,787	+		DZA65_RS10775	0.70	-0.3
2,280,787	+		DZA65_RS10775	0.70	-0.5
2,280,788	-		DZA65_RS10775	0.70	+0.7
2,280,868	+		DZA65_RS10775	0.74	-0.6
2,280,868	+		DZA65_RS10775	0.74	-0.5
2,280,869	-		DZA65_RS10775	0.74	+0.3
2,280,869	-		DZA65_RS10775	0.74	-0.1
2,280,869	-		DZA65_RS10775	0.74	-0.6
2,280,872	-		DZA65_RS10775	0.75	+0.2
2,280,872	-		DZA65_RS10775	0.75	+1.1
2,280,872	-		DZA65_RS10775	0.75	-0.5
2,280,872	-		DZA65_RS10775	0.75	-0.8
2,280,872	-		DZA65_RS10775	0.75	-1.7
2,280,872	-		DZA65_RS10775	0.75	-0.8
2,280,952	+		DZA65_RS10775	0.79	-1.1
2,280,952	+		DZA65_RS10775	0.79	-0.3
2,280,952	+		DZA65_RS10775	0.79	-0.8
2,280,952	+		DZA65_RS10775	0.79	-1.3
2,280,953	-		DZA65_RS10775	0.79	+0.7
2,280,953	-		DZA65_RS10775	0.79	+0.4
2,280,953	-		DZA65_RS10775	0.79	-0.6
2,280,953	-		DZA65_RS10775	0.79	+0.3
2,280,953	-		DZA65_RS10775	0.79	-0.7
2,280,953	-		DZA65_RS10775	0.79	+1.2
2,280,953	-		DZA65_RS10775	0.79	-0.3
2,280,953	-		DZA65_RS10775	0.79	+1.3
2,281,053	-		DZA65_RS10775	0.84	-0.8
2,281,161	+				-1.1
2,281,173	+				-1.3
2,281,209	+				-0.6
2,281,209	+				+0.0
2,281,220	-				-0.6
2,281,220	-				-1.6
2,281,220	-				-0.1
2,281,220	-				+0.7
2,281,220	-				+0.5
2,281,220	-				-0.8
2,281,220	-				+0.2
2,281,269	-				-0.1
2,281,312	-				+1.1
2,281,372	+				-0.7
2,281,417	+				+0.0
2,281,476	-				+0.7
2,281,476	-				+2.5
2,281,486	+				-0.6
2,281,486	+				-0.5
2,281,486	+				-0.8
2,281,486	+				+2.1
2,281,490	+				+0.5
2,281,490	+				-1.6
2,281,491	-				+0.4
2,281,491	-				-0.3
2,281,491	-				-0.3
2,281,491	-				+2.3
2,281,539	+				+0.0
2,281,540	-				-0.3
2,281,548	+				-0.6
2,281,571	+				-1.1
2,281,571	+				-0.4
2,281,571	+				+0.9
2,281,572	-				+1.3
2,281,572	-				-0.7
2,281,629	+				+0.7
2,281,693	+		DZA65_RS10780	0.15	-0.6
2,281,909	+		DZA65_RS10780	0.54	-0.1
2,281,909	+		DZA65_RS10780	0.54	-0.3
2,281,910	-		DZA65_RS10780	0.54	+0.3
2,281,935	+		DZA65_RS10780	0.59	+1.3
2,281,996	+		DZA65_RS10780	0.70	+0.7
2,282,085	-		DZA65_RS10780	0.86	+1.5
2,282,085	-		DZA65_RS10780	0.86	-0.8
2,282,085	-		DZA65_RS10780	0.86	-0.4
2,282,134	+				-1.8
2,282,135	-				+0.3
2,282,153	+				-0.6
2,282,153	+				-0.1
2,282,153	+				-1.3
2,282,153	+				+0.9
2,282,154	-				-0.5
2,282,154	-				-0.8
2,282,154	-				+1.1
2,282,159	+				-1.6
2,282,159	+				+1.1
2,282,160	-				-0.6
2,282,221	+				-0.3
2,282,405	+				+0.0
2,282,405	+				+0.0
2,282,405	+				+1.2
2,282,406	-				-0.3
2,282,574	+		DZA65_RS10785	0.17	-0.7
2,282,574	+		DZA65_RS10785	0.17	-0.6
2,282,598	-		DZA65_RS10785	0.18	-1.1
2,282,760	-		DZA65_RS10785	0.27	-1.8
2,282,760	-		DZA65_RS10785	0.27	+0.0
2,282,760	-		DZA65_RS10785	0.27	+0.0
2,282,783	+		DZA65_RS10785	0.28	-0.7
2,282,784	-		DZA65_RS10785	0.28	-0.9
2,282,784	-		DZA65_RS10785	0.28	+1.0
2,282,784	-		DZA65_RS10785	0.28	-0.3
2,282,784	-		DZA65_RS10785	0.28	+0.5
2,282,784	-		DZA65_RS10785	0.28	+0.0
2,282,784	-		DZA65_RS10785	0.28	-2.1
2,282,785	+		DZA65_RS10785	0.28	-1.3
2,282,785	+		DZA65_RS10785	0.28	-1.1
2,282,786	-		DZA65_RS10785	0.28	-1.3
2,282,786	-		DZA65_RS10785	0.28	-0.8
2,282,786	-		DZA65_RS10785	0.28	-0.3
2,282,786	-		DZA65_RS10785	0.28	-1.6
2,282,786	-		DZA65_RS10785	0.28	+0.2
2,282,786	-		DZA65_RS10785	0.28	-0.6
2,282,906	+		DZA65_RS10785	0.34	-0.7
2,282,907	-		DZA65_RS10785	0.34	-1.6
2,282,990	+				-0.6
2,283,080	+		DZA65_RS10785	0.43	-1.6
2,283,080	+		DZA65_RS10785	0.43	-1.1
2,283,081	-		DZA65_RS10785	0.43	-1.0
2,283,081	-		DZA65_RS10785	0.43	-0.4
2,283,081	-		DZA65_RS10785	0.43	-0.2
2,283,081	-		DZA65_RS10785	0.43	+0.6
2,283,081	-		DZA65_RS10785	0.43	-0.8
2,283,082	+		DZA65_RS10785	0.43	-1.0
2,283,082	+		DZA65_RS10785	0.43	-1.4
2,283,083	-		DZA65_RS10785	0.43	+0.0
2,283,083	-		DZA65_RS10785	0.43	-1.0
2,283,083	-		DZA65_RS10785	0.43	+0.0
2,283,088	+		DZA65_RS10785	0.44	-0.4