Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09835

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,072,400	+				+0.5
2,072,458	-				+2.1
2,072,467	+				-1.1
2,072,467	+				+1.4
2,072,467	+				-1.0
2,072,467	+				+0.2
2,072,468	-				-0.2
2,072,479	-				-0.1
2,072,662	+				-0.9
2,072,809	+		DZA65_RS09830	0.12	-0.2
2,072,809	+		DZA65_RS09830	0.12	-0.8
2,072,845	+		DZA65_RS09830	0.18	-0.3
2,072,845	+		DZA65_RS09830	0.18	+0.2
2,072,845	+		DZA65_RS09830	0.18	-2.8
2,072,846	-		DZA65_RS09830	0.18	-2.4
2,072,846	-		DZA65_RS09830	0.18	+0.4
2,072,846	-		DZA65_RS09830	0.18	+1.4
2,072,846	-		DZA65_RS09830	0.18	-1.5
2,072,846	-		DZA65_RS09830	0.18	-0.2
2,072,846	-		DZA65_RS09830	0.18	-0.8
2,072,894	+		DZA65_RS09830	0.25	-1.7
2,072,902	+		DZA65_RS09830	0.26	-0.2
2,072,902	+		DZA65_RS09830	0.26	-0.2
2,072,903	-		DZA65_RS09830	0.26	-0.5
2,072,903	-		DZA65_RS09830	0.26	-0.8
2,072,903	-		DZA65_RS09830	0.26	-0.8
2,072,903	-		DZA65_RS09830	0.26	-0.9
2,072,903	-		DZA65_RS09830	0.26	-0.2
2,072,948	-		DZA65_RS09830	0.33	-0.1
2,073,051	-		DZA65_RS09830	0.48	-0.8
2,073,083	+		DZA65_RS09830	0.53	+0.2
2,073,084	-		DZA65_RS09830	0.53	-0.9
2,073,085	+		DZA65_RS09830	0.53	-0.4
2,073,085	+		DZA65_RS09830	0.53	-0.2
2,073,196	+		DZA65_RS09830	0.70	+1.0
2,073,196	+		DZA65_RS09830	0.70	+3.1
2,073,247	+		DZA65_RS09830	0.77	-0.5
2,073,247	+		DZA65_RS09830	0.77	+0.5
2,073,248	-		DZA65_RS09830	0.78	+0.8
2,073,248	-		DZA65_RS09830	0.78	-0.2
2,073,248	-		DZA65_RS09830	0.78	-0.2
2,073,248	-		DZA65_RS09830	0.78	-0.5
2,073,254	+		DZA65_RS09830	0.78	-1.8
2,073,254	+		DZA65_RS09830	0.78	-1.1
2,073,254	+		DZA65_RS09830	0.78	-0.1
2,073,254	+		DZA65_RS09830	0.78	-1.5
2,073,255	-		DZA65_RS09830	0.79	-0.4
2,073,255	-		DZA65_RS09830	0.79	-0.2
2,073,255	-		DZA65_RS09830	0.79	+0.2
2,073,255	-		DZA65_RS09830	0.79	-0.6
2,073,255	-		DZA65_RS09830	0.79	+0.2
2,073,258	+		DZA65_RS09830	0.79	+0.6
2,073,432	-				+0.0
2,073,461	+				+0.4
2,073,461	+				-0.4
2,073,461	+				-0.3
2,073,462	-				-0.2
2,073,462	-				-1.0
2,073,462	-				-0.6
2,073,464	+				+1.0
2,073,480	+		DZA65_RS09835	0.11	+0.4
2,073,480	+		DZA65_RS09835	0.11	+0.2
2,073,480	+		DZA65_RS09835	0.11	+0.2
2,073,480	+		DZA65_RS09835	0.11	-0.8
2,073,481	-		DZA65_RS09835	0.12	-2.9
2,073,481	-				-1.2
2,073,501	+		DZA65_RS09835	0.14	+0.8
2,073,501	+		DZA65_RS09835	0.14	-0.5
2,073,501	+		DZA65_RS09835	0.14	-0.8
2,073,501	+		DZA65_RS09835	0.14	+0.8
2,073,502	-		DZA65_RS09835	0.15	+1.8
2,073,502	-		DZA65_RS09835	0.15	-0.5
2,073,502	-		DZA65_RS09835	0.15	-2.4
2,073,502	-		DZA65_RS09835	0.15	-0.9
2,073,682	+		DZA65_RS09835	0.40	-1.0
2,073,683	-		DZA65_RS09835	0.40	+0.1
2,073,683	-				+1.2
2,073,683	-		DZA65_RS09835	0.40	+0.2
2,073,683	-		DZA65_RS09835	0.40	+0.4
2,073,762	+		DZA65_RS09835	0.51	-1.8
2,073,771	+		DZA65_RS09835	0.52	-0.5
2,073,771	+		DZA65_RS09835	0.52	+1.4
2,073,771	+		DZA65_RS09835	0.52	+0.0
2,073,772	-		DZA65_RS09835	0.52	+0.0
2,073,772	-		DZA65_RS09835	0.52	-0.8
2,073,772	-		DZA65_RS09835	0.52	-0.6
2,073,772	-		DZA65_RS09835	0.52	+0.8
2,073,865	+		DZA65_RS09835	0.65	-1.0
2,073,866	-		DZA65_RS09835	0.65	+0.5
2,073,866	-		DZA65_RS09835	0.65	-0.8
2,073,915	+		DZA65_RS09835	0.72	-0.6
2,073,915	+		DZA65_RS09835	0.72	-1.7
2,073,915	+		DZA65_RS09835	0.72	-1.5
2,073,916	-		DZA65_RS09835	0.72	-0.2
2,073,916	-		DZA65_RS09835	0.72	-0.9
2,073,916	-		DZA65_RS09835	0.72	-1.0
2,073,916	-		DZA65_RS09835	0.72	-0.9
2,073,919	+		DZA65_RS09835	0.73	+2.4
2,073,919	+		DZA65_RS09835	0.73	+0.2
2,074,132	-				-1.2
2,074,152	+				-1.0
2,074,153	-				-0.6
2,074,153	-				+0.8
2,074,165	-				-1.0
2,074,263	+		DZA65_RS09840	0.18	+1.2
2,074,263	+		DZA65_RS09840	0.18	-1.0
2,074,263	+		DZA65_RS09840	0.18	-1.8
2,074,264	-		DZA65_RS09840	0.18	-1.6
2,074,396	-		DZA65_RS09840	0.36	+0.2
2,074,426	+		DZA65_RS09840	0.40	-1.2
2,074,426	+		DZA65_RS09840	0.40	+0.8
2,074,426	+		DZA65_RS09840	0.40	-0.2
2,074,426	+		DZA65_RS09840	0.40	+0.8
2,074,427	-		DZA65_RS09840	0.41	-0.8
2,074,427	-		DZA65_RS09840	0.41	-0.0
2,074,427	-		DZA65_RS09840	0.41	-0.9
2,074,427	-		DZA65_RS09840	0.41	+0.2
2,074,548	+		DZA65_RS09840	0.57	-0.5
2,074,551	+		DZA65_RS09840	0.58	+0.1
2,074,551	+		DZA65_RS09840	0.58	-0.2
2,074,552	-		DZA65_RS09840	0.58	-0.6
2,074,552	-		DZA65_RS09840	0.58	+0.2
2,074,621	-		DZA65_RS09840	0.67	+1.4
2,074,651	+		DZA65_RS09840	0.71	-0.7
2,074,675	+		DZA65_RS09840	0.74	+0.8
2,074,676	-		DZA65_RS09840	0.75	-0.4
2,074,676	-		DZA65_RS09840	0.75	-0.5
2,074,676	-		DZA65_RS09840	0.75	-0.2
2,074,823	+				-1.0
2,074,970	+		DZA65_RS09845	0.12	-3.1
2,074,970	+		DZA65_RS09845	0.12	+0.5
2,074,970	+		DZA65_RS09845	0.12	-0.7
2,074,971	-		DZA65_RS09845	0.13	-1.5
2,074,971	-		DZA65_RS09845	0.13	-2.0
2,074,971	-		DZA65_RS09845	0.13	-0.5
2,075,058	+		DZA65_RS09845	0.25	-0.2