Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06305

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,312,852	+		DZA65_RS06295	0.88	-0.3
1,312,852	+		DZA65_RS06295	0.88	-0.3
1,312,852	+		DZA65_RS06295	0.88	-0.8
1,312,852	+		DZA65_RS06295	0.88	-1.2
1,312,852	+		DZA65_RS06295	0.88	-1.0
1,312,852	+		DZA65_RS06295	0.88	+1.4
1,312,852	+		DZA65_RS06295	0.88	+0.5
1,312,852	+		DZA65_RS06295	0.88	+0.2
1,312,852	+		DZA65_RS06295	0.88	+0.3
1,312,852	+				+1.0
1,312,853	-		DZA65_RS06295	0.88	-1.9
1,312,853	-		DZA65_RS06295	0.88	+1.0
1,312,853	-		DZA65_RS06295	0.88	-0.3
1,312,853	-		DZA65_RS06295	0.88	+0.8
1,312,853	-		DZA65_RS06295	0.88	-0.5
1,312,853	-		DZA65_RS06295	0.88	+0.3
1,312,853	-		DZA65_RS06295	0.88	-0.3
1,312,853	-		DZA65_RS06295	0.88	+0.1
1,312,853	-		DZA65_RS06295	0.88	-0.4
1,312,853	-		DZA65_RS06295	0.88	-0.8
1,312,853	-		DZA65_RS06295	0.88	-0.0
1,312,853	-		DZA65_RS06295	0.88	+1.0
1,312,857	+		DZA65_RS06295	0.88	-1.0
1,312,857	+		DZA65_RS06295	0.88	-0.7
1,312,857	+		DZA65_RS06295	0.88	-0.0
1,312,858	-		DZA65_RS06295	0.88	+0.4
1,312,858	-		DZA65_RS06295	0.88	-1.4
1,312,977	+				+0.9
1,312,977	+				-1.2
1,312,977	+				-0.0
1,312,977	+				+2.0
1,312,977	+				+1.2
1,312,977	+				-0.4
1,312,978	-				-0.6
1,312,978	-				-0.6
1,312,978	-				-0.8
1,313,161	-		DZA65_RS06300	0.13	+0.5
1,313,161	-		DZA65_RS06300	0.13	-0.6
1,313,334	+		DZA65_RS06300	0.35	-1.0
1,313,334	+		DZA65_RS06300	0.35	-1.0
1,313,334	+		DZA65_RS06300	0.35	-0.6
1,313,334	+		DZA65_RS06300	0.35	+2.0
1,313,334	+		DZA65_RS06300	0.35	+0.1
1,313,335	-		DZA65_RS06300	0.35	+1.0
1,313,335	-		DZA65_RS06300	0.35	+2.0
1,313,335	-		DZA65_RS06300	0.35	-1.4
1,313,335	-		DZA65_RS06300	0.35	+0.6
1,313,335	-		DZA65_RS06300	0.35	-0.0
1,313,335	-		DZA65_RS06300	0.35	-0.0
1,313,335	-		DZA65_RS06300	0.35	-0.6
1,313,481	-		DZA65_RS06300	0.53	-0.5
1,313,500	-		DZA65_RS06300	0.56	+1.0
1,313,557	+		DZA65_RS06300	0.63	-0.0
1,313,558	-		DZA65_RS06300	0.63	+1.7
1,313,558	-		DZA65_RS06300	0.63	+0.5
1,313,611	+		DZA65_RS06300	0.70	+0.2
1,313,611	+		DZA65_RS06300	0.70	+0.2
1,313,612	-		DZA65_RS06300	0.70	-0.0
1,313,612	-		DZA65_RS06300	0.70	+0.2
1,313,650	+		DZA65_RS06300	0.75	-0.8
1,313,651	-		DZA65_RS06300	0.75	+1.5
1,313,667	+		DZA65_RS06300	0.77	-0.8
1,313,781	+				+0.0
1,313,782	-				+0.5
1,313,832	+				+0.5
1,313,833	-				-0.0
1,313,833	-				-1.4
1,313,861	-				-1.2
1,313,911	+				+0.2
1,313,990	+		DZA65_RS06305	0.18	+0.5
1,314,340	+		DZA65_RS06305	0.59	-0.4
1,314,340	+		DZA65_RS06305	0.59	-0.6
1,314,340	+		DZA65_RS06305	0.59	-0.6
1,314,340	+				-0.0
1,314,340	+		DZA65_RS06305	0.59	-1.0
1,314,341	-		DZA65_RS06305	0.59	+0.5
1,314,341	-		DZA65_RS06305	0.59	-0.3
1,314,341	-		DZA65_RS06305	0.59	-0.5
1,314,341	-		DZA65_RS06305	0.59	-0.6
1,314,341	-		DZA65_RS06305	0.59	-0.0
1,314,341	-		DZA65_RS06305	0.59	-1.0
1,314,341	-		DZA65_RS06305	0.59	-0.9
1,314,400	+		DZA65_RS06305	0.66	+0.4
1,314,400	+		DZA65_RS06305	0.66	+0.2
1,314,400	+		DZA65_RS06305	0.66	-0.0
1,314,401	-		DZA65_RS06305	0.66	+1.0
1,314,401	-		DZA65_RS06305	0.66	+0.5
1,314,401	-		DZA65_RS06305	0.66	-1.7
1,314,401	-		DZA65_RS06305	0.66	+1.0
1,314,604	+		DZA65_RS06305	0.90	-0.4
1,314,604	+		DZA65_RS06305	0.90	-1.6
1,314,604	+		DZA65_RS06305	0.90	-0.3
1,314,604	+		DZA65_RS06305	0.90	-1.8
1,314,604	+		DZA65_RS06305	0.90	-0.8
1,314,604	+		DZA65_RS06305	0.90	-0.0
1,314,605	-				-0.0
1,314,605	-				-0.5
1,314,605	-				-0.2
1,314,605	-				-1.6
1,314,714	+				+0.1
1,314,750	-				+1.5
1,314,782	+				+0.1
1,314,783	-				+0.2
1,314,783	-				-0.2
1,314,783	-				-1.4
1,314,905	-		DZA65_RS06310	0.22	-2.9
1,315,007	+		DZA65_RS06310	0.33	-0.5
1,315,008	-		DZA65_RS06310	0.33	-2.2
1,315,042	+		DZA65_RS06310	0.36	-0.3
1,315,042	+		DZA65_RS06310	0.36	+0.5
1,315,043	-		DZA65_RS06310	0.36	+0.6
1,315,043	-		DZA65_RS06310	0.36	-0.0
1,315,084	+		DZA65_RS06310	0.41	-0.6
1,315,084	+		DZA65_RS06310	0.41	-0.5
1,315,085	-		DZA65_RS06310	0.41	-0.4
1,315,098	+		DZA65_RS06310	0.42	+0.5
1,315,098	+		DZA65_RS06310	0.42	+0.1
1,315,099	-		DZA65_RS06310	0.42	+1.0
1,315,099	-		DZA65_RS06310	0.42	+0.5
1,315,099	-		DZA65_RS06310	0.42	+1.2
1,315,099	-		DZA65_RS06310	0.42	+1.0
1,315,099	-		DZA65_RS06310	0.42	+1.0
1,315,123	+		DZA65_RS06310	0.45	-2.5
1,315,123	+		DZA65_RS06310	0.45	+0.8
1,315,123	+		DZA65_RS06310	0.45	+0.5
1,315,123	+		DZA65_RS06310	0.45	-1.0
1,315,124	-		DZA65_RS06310	0.45	-0.9
1,315,218	+		DZA65_RS06310	0.54	-1.5
1,315,218	+		DZA65_RS06310	0.54	-1.6
1,315,219	-		DZA65_RS06310	0.55	+0.4
1,315,219	-		DZA65_RS06310	0.55	-0.5
1,315,219	-		DZA65_RS06310	0.55	-0.0
1,315,219	-		DZA65_RS06310	0.55	+0.5
1,315,233	+		DZA65_RS06310	0.56	-0.6
1,315,385	+		DZA65_RS06310	0.72	-1.3
1,315,385	+		DZA65_RS06310	0.72	-0.6
1,315,386	-		DZA65_RS06310	0.72	-0.6
1,315,389	-		DZA65_RS06310	0.72	+1.0
1,315,389	-		DZA65_RS06310	0.72	+0.4
1,315,559	+		DZA65_RS06310	0.90	-0.0
1,315,559	+		DZA65_RS06310	0.90	-1.0
1,315,559	+		DZA65_RS06310	0.90	-0.8
1,315,560	-		DZA65_RS06310	0.90	-0.3