Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22150

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,788,181	+				+1.3
4,788,181	+				-0.3
4,788,181	+				-0.7
4,788,181	+				-0.6
4,788,193	+				-0.3
4,788,193	+				-1.1
4,788,194	-				-0.6
4,788,219	+				+1.9
4,788,219	+				-0.9
4,788,253	+				-1.4
4,788,253	+				+2.4
4,788,253	+				+0.8
4,788,260	+				+1.9
4,788,260	+				+0.8
4,788,260	+				+1.9
4,788,271	+				-0.8
4,788,271	+				+0.0
4,788,271	+				-0.7
4,788,396	+		DZA65_RS22145	0.49	-0.5
4,788,396	+		DZA65_RS22145	0.49	+0.9
4,788,396	+		DZA65_RS22145	0.49	-0.4
4,788,396	+		DZA65_RS22145	0.49	+1.3
4,790,251	+		DZA65_RS22150	0.80	+0.8
4,790,523	-				-0.7
4,790,528	+				+0.6
4,790,576	+				-1.4
4,790,661	+				+0.5
4,790,669	+				-0.3
4,790,669	+				+0.3
4,790,670	-				-0.1
4,790,670	-				-0.2
4,790,685	+				-0.6
4,790,685	+				-0.5
4,790,685	+				-1.3
4,790,686	-				+0.2
4,790,686	-				+0.3
4,790,687	+				-0.6
4,790,687	+				+0.3
4,790,687	+				-0.7
4,790,687	+				-0.6
4,790,687	+				-0.1
4,790,687	+				-1.1
4,790,687	+				+0.3
4,790,688	-				-0.3
4,790,688	-				-1.0
4,790,688	-				-1.3
4,790,688	-				+0.3
4,790,688	-				+0.3
4,790,688	-				-1.1
4,790,688	-				-0.7
4,790,688	-				+2.0
4,790,693	+				-0.3
4,790,694	-				+0.3
4,790,694	-				-0.7
4,790,694	-				-2.1
4,790,708	+				-2.1
4,790,709	-				-0.9
4,790,709	-				-0.9
4,790,734	+				+0.7
4,790,734	+				+0.0
4,790,734	+				-0.6
4,790,734	+				-1.1
4,790,734	+				-0.6
4,790,735	-				-1.3
4,790,735	-				-0.7
4,790,753	+		DZA65_RS22155	0.12	-1.1
4,790,753	+		DZA65_RS22155	0.12	-0.1
4,790,753	+		DZA65_RS22155	0.12	-1.1
4,790,753	+		DZA65_RS22155	0.12	-0.8
4,790,753	+		DZA65_RS22155	0.12	+0.8
4,790,753	+		DZA65_RS22155	0.12	+0.3
4,790,753	+		DZA65_RS22155	0.12	-0.4
4,790,753	+		DZA65_RS22155	0.12	+0.3
4,790,754	-		DZA65_RS22155	0.12	-0.6
4,790,767	+		DZA65_RS22155	0.14	-0.8
4,790,767	+		DZA65_RS22155	0.14	-0.8
4,790,997	+		DZA65_RS22155	0.47	-1.3
4,790,997	+		DZA65_RS22155	0.47	-1.0
4,790,997	+		DZA65_RS22155	0.47	+0.8
4,790,997	+		DZA65_RS22155	0.47	+0.2
4,790,998	-		DZA65_RS22155	0.47	-0.6
4,790,998	-		DZA65_RS22155	0.47	-0.4
4,790,998	-		DZA65_RS22155	0.47	+0.3
4,791,008	+		DZA65_RS22155	0.49	-0.7
4,791,008	+		DZA65_RS22155	0.49	-0.1
4,791,180	+		DZA65_RS22155	0.74	-1.0
4,791,180	+		DZA65_RS22155	0.74	-0.5
4,791,181	-		DZA65_RS22155	0.74	+0.3
4,791,181	-		DZA65_RS22155	0.74	-0.3
4,791,181	-		DZA65_RS22155	0.74	-0.3
4,791,193	-		DZA65_RS22155	0.75	+0.2
4,791,302	+				+0.9
4,791,383	-				-1.0
4,791,394	-				-2.7
4,791,468	+				-0.2
4,791,468	+				+0.3
4,791,469	-				+0.3
4,791,469	-				-0.7
4,791,486	+				-0.6
4,791,487	-				-2.9
4,791,492	-				-0.3
4,791,512	+				+1.3
4,791,512	+				-0.2
4,791,520	+				+0.3
4,791,542	+				-1.2
4,791,542	+				+1.0
4,791,542	+				+0.3
4,791,542	+				+0.3
4,791,542	+				-0.9
4,791,542	+				-0.5
4,791,543	-				-0.7
4,791,543	-				-2.1
4,791,543	-				-0.3
4,791,543	-				+0.7
4,791,543	-				-1.5
4,791,543	-				+1.3
4,791,552	+				+0.5
4,791,552	+				+0.3
4,791,552	+				-0.7
4,791,553	-				-0.5
4,791,553	-				-1.2
4,791,553	-				+0.3
4,791,553	-				+1.3
4,791,553	-				-0.3
4,791,553	-				+0.3
4,791,553	-				-0.6
4,791,553	-				-0.3
4,791,553	-				+0.5
4,791,553	-				-3.4
4,791,580	+		DZA65_RS22160	0.10	-0.7
4,791,580	+		DZA65_RS22160	0.10	-2.1
4,791,581	-		DZA65_RS22160	0.11	-0.9
4,791,581	-		DZA65_RS22160	0.11	-2.1
4,791,581	-		DZA65_RS22160	0.11	+0.0
4,791,581	-		DZA65_RS22160	0.11	-1.4
4,791,581	-		DZA65_RS22160	0.11	-0.1
4,791,653	-		DZA65_RS22160	0.14	+0.3
4,791,653	-		DZA65_RS22160	0.14	-0.3
4,791,653	-		DZA65_RS22160	0.14	+0.9