Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21765

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,706,314	-		DZA65_RS21755	0.65	-1.6
4,706,314	-		DZA65_RS21755	0.65	-1.3
4,706,314	-		DZA65_RS21755	0.65	+0.3
4,706,314	-		DZA65_RS21755	0.65	-1.7
4,706,314	-		DZA65_RS21755	0.65	-1.1
4,706,314	-				-0.3
4,706,317	+		DZA65_RS21755	0.66	-0.3
4,706,317	+		DZA65_RS21755	0.66	-0.9
4,706,317	+		DZA65_RS21755	0.66	-0.7
4,706,317	+		DZA65_RS21755	0.66	-0.3
4,706,317	+		DZA65_RS21755	0.66	+0.5
4,706,318	-		DZA65_RS21755	0.66	+0.8
4,706,318	-		DZA65_RS21755	0.66	+1.7
4,706,318	-		DZA65_RS21755	0.66	-0.5
4,706,318	-		DZA65_RS21755	0.66	-1.5
4,706,318	-		DZA65_RS21755	0.66	-0.7
4,706,389	+		DZA65_RS21755	0.73	-1.0
4,706,397	+		DZA65_RS21755	0.74	-0.9
4,706,397	+		DZA65_RS21755	0.74	-1.4
4,706,397	+		DZA65_RS21755	0.74	-1.1
4,706,421	+		DZA65_RS21755	0.76	-0.1
4,706,463	+		DZA65_RS21755	0.81	-0.1
4,706,463	+		DZA65_RS21755	0.81	-0.7
4,706,464	-		DZA65_RS21755	0.81	+0.3
4,706,464	-				-1.7
4,706,464	-		DZA65_RS21755	0.81	-1.9
4,706,638	+				-0.3
4,706,642	-				-0.2
4,706,642	-				-1.6
4,706,783	+		DZA65_RS21760	0.21	-2.2
4,706,783	+		DZA65_RS21760	0.21	-0.2
4,706,784	-		DZA65_RS21760	0.22	-0.7
4,706,846	+		DZA65_RS21760	0.31	-0.4
4,706,847	-		DZA65_RS21760	0.31	-1.1
4,706,847	-		DZA65_RS21760	0.31	+1.3
4,706,847	-		DZA65_RS21760	0.31	+0.3
4,707,019	+		DZA65_RS21760	0.57	+0.0
4,707,019	+		DZA65_RS21760	0.57	-1.8
4,707,019	+		DZA65_RS21760	0.57	-1.7
4,707,020	-		DZA65_RS21760	0.57	-1.1
4,707,020	-		DZA65_RS21760	0.57	+1.3
4,707,020	-		DZA65_RS21760	0.57	-0.3
4,707,113	+		DZA65_RS21760	0.71	-0.9
4,707,182	+				-0.1
4,707,183	-		DZA65_RS21760	0.81	+0.8
4,707,216	+		DZA65_RS21760	0.86	-0.1
4,707,216	+		DZA65_RS21760	0.86	-1.1
4,707,277	+				-1.1
4,707,277	+				-1.1
4,707,278	-				+1.3
4,707,278	-				-0.3
4,707,287	+				+0.8
4,707,315	+				+0.8
4,707,315	+				-0.5
4,707,316	-				-2.1
4,708,747	-				+0.7
4,708,843	+				-0.9
4,708,843	+				+1.8
4,708,843	+				-1.7
4,708,843	+				-0.1
4,708,843	+				+0.3
4,708,843	+				-0.3
4,708,843	+				+0.0
4,708,843	+				-0.7
4,708,844	-				-0.5
4,708,844	-				-0.3
4,708,844	-				-0.3
4,708,844	-				-0.1
4,708,844	-				+0.1
4,708,844	-				-1.3
4,708,844	-				-1.5
4,708,897	+				-0.0
4,708,897	+				-1.3
4,708,897	+				+1.8
4,708,924	+				-1.9
4,708,924	+				+0.9
4,708,924	+				-2.3
4,708,924	+				+1.0
4,708,929	+				-2.4
4,708,968	+				+1.3
4,708,968	+				+0.5
4,708,968	+				+2.0
4,708,968	+				-0.9
4,708,969	-				-0.3
4,708,969	-				+0.3
4,708,969	-				+0.0
4,709,211	+		DZA65_RS21770	0.36	-1.1
4,709,211	+		DZA65_RS21770	0.36	+0.7
4,709,212	-		DZA65_RS21770	0.36	-0.3
4,709,306	-		DZA65_RS21770	0.51	-0.5
4,709,306	-		DZA65_RS21770	0.51	-0.9
4,709,306	-		DZA65_RS21770	0.51	-1.1
4,709,306	-		DZA65_RS21770	0.51	-0.6
4,709,358	+		DZA65_RS21770	0.59	-0.1
4,709,358	+		DZA65_RS21770	0.59	+0.9
4,709,359	-		DZA65_RS21770	0.59	+2.3
4,709,460	+		DZA65_RS21770	0.75	+1.0
4,709,460	+		DZA65_RS21770	0.75	-0.3
4,709,460	+		DZA65_RS21770	0.75	+2.3
4,709,460	+		DZA65_RS21770	0.75	+0.8
4,709,460	+		DZA65_RS21770	0.75	+0.3
4,709,460	+		DZA65_RS21770	0.75	-1.3
4,709,460	+		DZA65_RS21770	0.75	+1.3
4,709,460	+		DZA65_RS21770	0.75	+1.0
4,709,460	+		DZA65_RS21770	0.75	+0.3
4,709,460	+				+0.3
4,709,461	-		DZA65_RS21770	0.76	-1.5
4,709,461	-		DZA65_RS21770	0.76	+1.7
4,709,461	-		DZA65_RS21770	0.76	-0.9
4,709,461	-		DZA65_RS21770	0.76	-1.3
4,709,461	-		DZA65_RS21770	0.76	-0.3
4,709,461	-		DZA65_RS21770	0.76	-0.7
4,709,461	-		DZA65_RS21770	0.76	-0.3
4,709,461	-		DZA65_RS21770	0.76	+0.3
4,709,462	+		DZA65_RS21770	0.76	-0.7
4,709,556	+				+0.1
4,709,556	+				+0.0
4,709,556	+				-1.5
4,709,556	+				-0.7
4,709,556	+				+2.3
4,709,556	+				-1.2
4,709,556	+				+0.8
4,709,556	+				+0.3
4,709,556	+				+0.3
4,709,556	+				-0.7
4,709,557	-				+0.8
4,709,557	-				-0.3
4,709,557	-				-1.5
4,709,557	-				-1.7
4,709,557	-				-0.3
4,709,557	-				-1.1
4,709,557	-				-0.3
4,709,557	-				-1.3
4,709,557	-				-1.1
4,709,558	+				-1.9
4,709,558	+				-0.7
4,709,559	-				+1.1
4,709,624	+				-0.2
4,709,639	+		DZA65_RS21775	0.15	+0.3
4,709,657	+		DZA65_RS21775	0.21	-1.5
4,709,658	-		DZA65_RS21775	0.22	-0.9
4,709,658	-		DZA65_RS21775	0.22	-2.2
4,709,664	+		DZA65_RS21775	0.24	-1.1
4,709,664	+		DZA65_RS21775	0.24	+0.6
4,709,665	-		DZA65_RS21775	0.24	-1.1