Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS20370 and DZA65_RS20375 are separated by 134 nucleotides DZA65_RS20375 and DZA65_RS20380 are separated by 40 nucleotides DZA65_RS20380 and DZA65_RS20385 are separated by 25 nucleotides DZA65_RS20385 and DZA65_RS20390 are separated by 30 nucleotides
DZA65_RS20370: DZA65_RS20370 - DUF1992 domain-containing protein, at 4,414,554 to 4,414,940
_RS20370
DZA65_RS20375: DZA65_RS20375 - 50S ribosomal protein L17, at 4,415,075 to 4,415,467
_RS20375
DZA65_RS20380: DZA65_RS20380 - DNA-directed RNA polymerase subunit alpha, at 4,415,508 to 4,416,497
_RS20380
DZA65_RS20385: DZA65_RS20385 - 30S ribosomal protein S4, at 4,416,523 to 4,417,143
_RS20385
DZA65_RS20390: DZA65_RS20390 - 30S ribosomal protein S11, at 4,417,174 to 4,417,563
_RS20390
Position (kb)
4415
4416
4417 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4414.515 kb on + strand at 4414.515 kb on + strand at 4414.516 kb on - strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.517 kb on + strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.518 kb on - strand at 4414.543 kb on + strand at 4414.543 kb on + strand at 4414.565 kb on + strand at 4414.574 kb on + strand at 4414.574 kb on + strand at 4414.574 kb on + strand at 4414.574 kb on + strand at 4414.575 kb on - strand at 4414.575 kb on - strand at 4414.584 kb on + strand at 4414.585 kb on - strand at 4414.596 kb on + strand, within DZA65_RS20370 at 4414.596 kb on + strand, within DZA65_RS20370 at 4414.596 kb on + strand, within DZA65_RS20370 at 4414.597 kb on - strand, within DZA65_RS20370 at 4414.597 kb on - strand, within DZA65_RS20370 at 4414.609 kb on + strand, within DZA65_RS20370 at 4414.609 kb on + strand, within DZA65_RS20370 at 4414.610 kb on - strand, within DZA65_RS20370 at 4414.610 kb on - strand, within DZA65_RS20370 at 4414.656 kb on + strand, within DZA65_RS20370 at 4414.656 kb on + strand, within DZA65_RS20370 at 4414.656 kb on + strand, within DZA65_RS20370 at 4414.657 kb on - strand, within DZA65_RS20370 at 4414.657 kb on - strand, within DZA65_RS20370 at 4414.657 kb on - strand, within DZA65_RS20370 at 4414.683 kb on + strand, within DZA65_RS20370 at 4414.693 kb on + strand, within DZA65_RS20370 at 4414.693 kb on + strand, within DZA65_RS20370 at 4414.693 kb on + strand, within DZA65_RS20370 at 4414.693 kb on + strand, within DZA65_RS20370 at 4414.693 kb on + strand, within DZA65_RS20370 at 4414.694 kb on - strand, within DZA65_RS20370 at 4414.694 kb on - strand, within DZA65_RS20370 at 4414.801 kb on + strand, within DZA65_RS20370 at 4414.802 kb on - strand, within DZA65_RS20370 at 4414.812 kb on + strand, within DZA65_RS20370 at 4414.812 kb on + strand, within DZA65_RS20370 at 4414.812 kb on + strand, within DZA65_RS20370 at 4414.813 kb on - strand, within DZA65_RS20370 at 4414.813 kb on - strand, within DZA65_RS20370 at 4414.813 kb on - strand, within DZA65_RS20370 at 4414.813 kb on - strand, within DZA65_RS20370 at 4414.832 kb on + strand, within DZA65_RS20370 at 4414.908 kb on - strand at 4414.931 kb on + strand at 4414.931 kb on + strand at 4414.932 kb on - strand at 4414.940 kb on + strand at 4414.940 kb on + strand at 4414.940 kb on + strand at 4414.940 kb on + strand at 4414.940 kb on + strand at 4414.940 kb on + strand at 4414.940 kb on + strand at 4414.941 kb on - strand at 4414.941 kb on - strand at 4414.941 kb on - strand at 4414.941 kb on - strand at 4414.969 kb on + strand at 4414.969 kb on + strand at 4414.969 kb on + strand at 4414.969 kb on + strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.970 kb on - strand at 4414.976 kb on + strand at 4414.976 kb on + strand at 4414.977 kb on - strand at 4414.977 kb on - strand at 4414.977 kb on - strand at 4415.005 kb on + strand at 4415.005 kb on + strand at 4415.005 kb on + strand at 4415.006 kb on - strand at 4415.006 kb on - strand at 4415.006 kb on - strand at 4415.006 kb on - strand at 4415.020 kb on + strand at 4415.021 kb on - strand at 4415.021 kb on - strand at 4415.021 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,414,515 + -0.1 4,414,515 + +0.5 4,414,516 - -0.5 4,414,517 + +1.9 4,414,517 + -0.6 4,414,517 + -0.9 4,414,517 + -0.3 4,414,517 + -0.1 4,414,517 + +0.1 4,414,517 + -0.1 4,414,517 + -0.4 4,414,517 + -2.4 4,414,518 - +0.1 4,414,518 - -1.2 4,414,518 - +2.1 4,414,518 - -0.2 4,414,518 - +0.0 4,414,518 - -0.6 4,414,518 - -0.2 4,414,518 - -0.4 4,414,518 - -0.7 4,414,518 - +0.8 4,414,518 - +0.3 4,414,518 - -0.2 4,414,518 - +0.6 4,414,518 - -0.2 4,414,518 - +0.5 4,414,518 - -0.6 4,414,518 - -0.9 4,414,518 - -0.3 4,414,543 + +1.1 4,414,543 + +0.1 4,414,565 + +1.1 4,414,574 + +0.1 4,414,574 + -0.4 4,414,574 + -0.4 4,414,574 + -0.4 4,414,575 - -1.2 4,414,575 - +0.2 4,414,584 + +0.1 4,414,585 - +1.1 4,414,596 + DZA65_RS20370 0.11 -0.6 4,414,596 + DZA65_RS20370 0.11 +0.3 4,414,596 + DZA65_RS20370 0.11 -1.0 4,414,597 - DZA65_RS20370 0.11 +0.1 4,414,597 - DZA65_RS20370 0.11 -1.0 4,414,609 + DZA65_RS20370 0.14 +0.8 4,414,609 + DZA65_RS20370 0.14 +0.0 4,414,610 - DZA65_RS20370 0.14 -0.6 4,414,610 - DZA65_RS20370 0.14 -0.8 4,414,656 + DZA65_RS20370 0.26 -0.8 4,414,656 + DZA65_RS20370 0.26 +0.1 4,414,656 + DZA65_RS20370 0.26 -1.9 4,414,657 - DZA65_RS20370 0.27 +0.1 4,414,657 - DZA65_RS20370 0.27 +0.7 4,414,657 - DZA65_RS20370 0.27 +0.4 4,414,683 + DZA65_RS20370 0.33 -1.2 4,414,693 + DZA65_RS20370 0.36 -0.3 4,414,693 + DZA65_RS20370 0.36 +0.1 4,414,693 + DZA65_RS20370 0.36 -0.7 4,414,693 + DZA65_RS20370 0.36 +1.1 4,414,693 + DZA65_RS20370 0.36 +0.1 4,414,694 - DZA65_RS20370 0.36 -0.9 4,414,694 - DZA65_RS20370 0.36 +0.4 4,414,801 + DZA65_RS20370 0.64 +1.5 4,414,802 - DZA65_RS20370 0.64 -0.9 4,414,812 + DZA65_RS20370 0.67 +0.3 4,414,812 + DZA65_RS20370 0.67 -2.0 4,414,812 + DZA65_RS20370 0.67 +1.1 4,414,813 - DZA65_RS20370 0.67 -0.1 4,414,813 - DZA65_RS20370 0.67 -0.9 4,414,813 - DZA65_RS20370 0.67 -0.1 4,414,813 - DZA65_RS20370 0.67 -0.9 4,414,832 + DZA65_RS20370 0.72 +0.6 4,414,908 - -0.1 4,414,931 + +0.0 4,414,931 + -2.2 4,414,932 - +0.7 4,414,940 + +0.1 4,414,940 + +0.1 4,414,940 + +0.1 4,414,940 + +0.8 4,414,940 + -0.6 4,414,940 + +0.1 4,414,940 + -0.4 4,414,941 - +0.6 4,414,941 - +0.1 4,414,941 - +0.0 4,414,941 - +0.7 4,414,969 + -0.9 4,414,969 + -1.6 4,414,969 + +1.6 4,414,969 + -0.4 4,414,970 - -0.9 4,414,970 - -0.4 4,414,970 - +1.1 4,414,970 - +1.6 4,414,970 - -1.0 4,414,970 - -0.5 4,414,970 - -1.3 4,414,970 - +0.3 4,414,970 - -1.4 4,414,970 - -0.2 4,414,970 - -1.2 4,414,976 + -1.0 4,414,976 + +0.3 4,414,977 - -1.2 4,414,977 - +0.4 4,414,977 - +0.5 4,415,005 + -0.6 4,415,005 + -0.1 4,415,005 + -0.5 4,415,006 - -0.6 4,415,006 - +0.3 4,415,006 - -1.7 4,415,006 - -0.7 4,415,020 + -1.0 4,415,021 - -1.2 4,415,021 - -0.1 4,415,021 - -0.1
Or see this region's nucleotide sequence