Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,274,440	+				+1.1
4,274,441	-				+0.5
4,274,441	-				+0.7
4,274,507	+				-0.7
4,274,508	-				+0.6
4,274,648	-		DZA65_RS19735	0.11	+0.5
4,274,658	-				+0.5
4,274,804	+				+1.7
4,274,804	+		DZA65_RS19735	0.30	+0.1
4,274,806	+		DZA65_RS19735	0.31	+1.1
4,274,806	+		DZA65_RS19735	0.31	+0.5
4,274,806	+		DZA65_RS19735	0.31	+0.1
4,274,807	-		DZA65_RS19735	0.31	+0.1
4,274,808	+		DZA65_RS19735	0.31	+0.5
4,274,809	-		DZA65_RS19735	0.31	-0.6
4,274,860	-		DZA65_RS19735	0.38	+0.1
4,274,920	+		DZA65_RS19735	0.45	+1.1
4,274,951	-		DZA65_RS19735	0.49	+2.0
4,275,009	+		DZA65_RS19735	0.56	-0.9
4,275,058	-		DZA65_RS19735	0.63	+1.7
4,275,058	-		DZA65_RS19735	0.63	+1.5
4,275,066	+		DZA65_RS19735	0.64	-1.7
4,275,066	+		DZA65_RS19735	0.64	+0.1
4,275,066	+		DZA65_RS19735	0.64	+0.8
4,275,067	-		DZA65_RS19735	0.64	+1.1
4,275,067	-		DZA65_RS19735	0.64	-0.5
4,275,085	+		DZA65_RS19735	0.66	+0.7
4,275,177	-		DZA65_RS19735	0.78	+0.3
4,275,184	-		DZA65_RS19735	0.79	-0.1
4,275,284	-				+0.5
4,275,353	+				+0.5
4,275,354	-				+0.8
4,275,404	+				+0.4
4,275,404	+				-0.5
4,275,404	+				+0.1
4,275,405	-				-0.9
4,275,482	+		DZA65_RS19740	0.17	+0.5
4,275,482	+		DZA65_RS19740	0.17	+2.1
4,275,483	-		DZA65_RS19740	0.17	+0.1
4,275,483	-		DZA65_RS19740	0.17	+1.5
4,275,483	-		DZA65_RS19740	0.17	+0.3
4,275,506	-		DZA65_RS19740	0.20	+1.1
4,275,522	+		DZA65_RS19740	0.23	+0.1
4,275,522	+		DZA65_RS19740	0.23	+0.2
4,275,522	+		DZA65_RS19740	0.23	+1.1
4,275,523	-		DZA65_RS19740	0.23	+0.7
4,275,523	-		DZA65_RS19740	0.23	+1.5
4,275,550	-		DZA65_RS19740	0.27	+0.4
4,275,550	-		DZA65_RS19740	0.27	+1.6
4,275,556	+		DZA65_RS19740	0.27	-0.5
4,275,574	+		DZA65_RS19740	0.30	-0.9
4,275,602	+		DZA65_RS19740	0.34	-1.2
4,275,629	-		DZA65_RS19740	0.37	+0.1
4,275,629	-		DZA65_RS19740	0.37	+1.5
4,275,704	+		DZA65_RS19740	0.48	+0.5
4,275,705	-		DZA65_RS19740	0.48	+0.1
4,275,705	-		DZA65_RS19740	0.48	+0.7
4,275,705	-		DZA65_RS19740	0.48	-0.1
4,275,705	-		DZA65_RS19740	0.48	+0.1
4,275,706	+		DZA65_RS19740	0.48	+1.5
4,275,707	-		DZA65_RS19740	0.48	+1.1
4,275,755	-		DZA65_RS19740	0.55	+0.5
4,275,762	-		DZA65_RS19740	0.55	+0.5
4,275,794	-		DZA65_RS19740	0.60	-0.1
4,275,794	-		DZA65_RS19740	0.60	+1.3
4,275,794	-		DZA65_RS19740	0.60	-2.1
4,275,915	-		DZA65_RS19740	0.76	+0.3
4,275,962	-		DZA65_RS19740	0.83	-1.1
4,276,071	+				-0.2
4,276,075	+				-0.2
4,276,075	+				+1.7
4,276,121	-				+0.1
4,276,187	+				+0.3
4,276,192	+		DZA65_RS19745	0.10	+1.3
4,276,205	+		DZA65_RS19745	0.11	-0.3
4,276,272	+		DZA65_RS19745	0.19	+1.1
4,276,297	+		DZA65_RS19745	0.21	+0.4
4,276,350	-		DZA65_RS19745	0.27	+1.4
4,276,355	+		DZA65_RS19745	0.27	-0.6
4,276,371	-		DZA65_RS19745	0.29	+1.4
4,276,371	-		DZA65_RS19745	0.29	-0.1
4,276,371	-		DZA65_RS19745	0.29	+0.7
4,276,392	-		DZA65_RS19745	0.31	+0.5
4,276,444	-		DZA65_RS19745	0.37	-0.9
4,276,453	+		DZA65_RS19745	0.38	+0.2
4,276,503	+		DZA65_RS19745	0.43	-0.2
4,276,510	-		DZA65_RS19745	0.44	+0.3
4,276,544	+		DZA65_RS19745	0.47	+2.1
4,276,549	+		DZA65_RS19745	0.48	+1.1
4,276,560	+		DZA65_RS19745	0.49	+0.8
4,276,565	+		DZA65_RS19745	0.50	-0.3
4,276,565	+		DZA65_RS19745	0.50	+0.7
4,276,581	+		DZA65_RS19745	0.51	+0.5
4,276,668	+		DZA65_RS19745	0.61	+0.8
4,276,669	-		DZA65_RS19745	0.61	-0.2
4,276,741	-		DZA65_RS19745	0.68	-0.2
4,276,741	-		DZA65_RS19745	0.68	+0.8
4,276,745	+		DZA65_RS19745	0.69	+1.8
4,276,745	+		DZA65_RS19745	0.69	-1.2
4,276,746	-		DZA65_RS19745	0.69	+1.1
4,276,769	-		DZA65_RS19745	0.71	+0.5
4,276,782	-		DZA65_RS19745	0.73	+0.4
4,276,816	+		DZA65_RS19745	0.76	-1.4
4,276,835	+		DZA65_RS19745	0.78	+0.2
4,276,857	+		DZA65_RS19745	0.81	+0.1
4,276,857	+		DZA65_RS19745	0.81	+0.6
4,276,860	+		DZA65_RS19745	0.81	-2.4
4,276,860	+		DZA65_RS19745	0.81	+1.7
4,276,861	-		DZA65_RS19745	0.81	+1.7
4,276,861	-		DZA65_RS19745	0.81	-1.2
4,276,861	-		DZA65_RS19745	0.81	-0.5
4,276,924	+		DZA65_RS19745	0.88	+0.7
4,276,924	+		DZA65_RS19745	0.88	-0.5
4,276,931	-		DZA65_RS19745	0.89	+1.1
4,276,931	-		DZA65_RS19745	0.89	+0.9
4,277,049	+				+0.4
4,277,049	+				+2.1
4,277,050	-				+0.4