Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19400

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,196,224	+				-0.9
4,196,224	+				-0.9
4,196,225	-				-0.5
4,196,353	+		DZA65_RS19395	0.14	+0.3
4,196,354	-		DZA65_RS19395	0.14	+1.1
4,196,354	-		DZA65_RS19395	0.14	+1.1
4,196,419	+		DZA65_RS19395	0.21	-0.5
4,196,419	+		DZA65_RS19395	0.21	+0.1
4,196,419	+		DZA65_RS19395	0.21	+1.7
4,196,419	+		DZA65_RS19395	0.21	-0.6
4,196,419	+		DZA65_RS19395	0.21	+0.5
4,196,420	-		DZA65_RS19395	0.21	-1.1
4,196,427	-		DZA65_RS19395	0.22	-1.6
4,196,433	+		DZA65_RS19395	0.23	-0.7
4,196,433	+		DZA65_RS19395	0.23	+0.1
4,196,433	+		DZA65_RS19395	0.23	-1.2
4,196,433	+		DZA65_RS19395	0.23	-1.2
4,196,433	+		DZA65_RS19395	0.23	-1.2
4,196,433	+		DZA65_RS19395	0.23	+1.7
4,196,433	+		DZA65_RS19395	0.23	+0.5
4,196,433	+		DZA65_RS19395	0.23	-1.5
4,196,434	-		DZA65_RS19395	0.23	-0.4
4,196,434	-		DZA65_RS19395	0.23	-0.7
4,196,434	-		DZA65_RS19395	0.23	+0.3
4,196,434	-		DZA65_RS19395	0.23	+1.5
4,196,434	-		DZA65_RS19395	0.23	-0.9
4,196,434	-		DZA65_RS19395	0.23	-1.6
4,196,434	-		DZA65_RS19395	0.23	-1.2
4,196,444	+		DZA65_RS19395	0.24	-0.2
4,196,444	+		DZA65_RS19395	0.24	-0.7
4,196,445	-		DZA65_RS19395	0.24	+0.4
4,196,554	-		DZA65_RS19395	0.36	-2.2
4,196,562	-		DZA65_RS19395	0.37	-1.5
4,196,663	+		DZA65_RS19395	0.48	-0.6
4,196,708	+		DZA65_RS19395	0.53	+0.1
4,196,708	+		DZA65_RS19395	0.53	-2.0
4,196,708	+		DZA65_RS19395	0.53	-0.7
4,196,708	+		DZA65_RS19395	0.53	-0.1
4,196,708	+		DZA65_RS19395	0.53	-1.7
4,196,709	-		DZA65_RS19395	0.53	-0.5
4,196,709	-		DZA65_RS19395	0.53	+0.7
4,196,709	-		DZA65_RS19395	0.53	+0.4
4,196,720	+		DZA65_RS19395	0.54	+1.1
4,196,815	+		DZA65_RS19395	0.64	-0.3
4,196,815	+		DZA65_RS19395	0.64	+0.1
4,196,815	+		DZA65_RS19395	0.64	+0.8
4,196,815	+		DZA65_RS19395	0.64	-0.1
4,196,815	+		DZA65_RS19395	0.64	-1.7
4,196,815	+		DZA65_RS19395	0.64	+1.1
4,196,815	+		DZA65_RS19395	0.64	-0.9
4,196,815	+		DZA65_RS19395	0.64	-1.5
4,196,815	+		DZA65_RS19395	0.64	+1.1
4,196,815	+		DZA65_RS19395	0.64	+0.6
4,196,816	-		DZA65_RS19395	0.65	-1.5
4,196,816	-		DZA65_RS19395	0.65	-1.5
4,196,816	-		DZA65_RS19395	0.65	-1.0
4,196,816	-		DZA65_RS19395	0.65	-0.2
4,196,816	-		DZA65_RS19395	0.65	+0.1
4,196,816	-		DZA65_RS19395	0.65	-0.9
4,196,816	-		DZA65_RS19395	0.65	-1.2
4,196,816	-		DZA65_RS19395	0.65	-1.5
4,196,816	-		DZA65_RS19395	0.65	+0.1
4,196,816	-		DZA65_RS19395	0.65	-1.1
4,196,816	-		DZA65_RS19395	0.65	+1.1
4,196,816	-		DZA65_RS19395	0.65	+0.5
4,196,816	-		DZA65_RS19395	0.65	+0.1
4,196,816	-		DZA65_RS19395	0.65	-0.6
4,196,816	-		DZA65_RS19395	0.65	+0.5
4,196,872	+		DZA65_RS19395	0.71	+1.5
4,196,903	-		DZA65_RS19395	0.74	-0.9
4,196,903	-		DZA65_RS19395	0.74	-1.1
4,196,903	-		DZA65_RS19395	0.74	-1.9
4,196,903	-		DZA65_RS19395	0.74	-1.1
4,196,903	-		DZA65_RS19395	0.74	-0.5
4,196,903	-		DZA65_RS19395	0.74	-0.9
4,196,903	-		DZA65_RS19395	0.74	-0.8
4,197,041	+		DZA65_RS19395	0.89	-0.7
4,197,041	+		DZA65_RS19395	0.89	+0.1
4,197,041	+		DZA65_RS19395	0.89	+0.5
4,197,042	-		DZA65_RS19395	0.89	-2.4
4,197,042	-		DZA65_RS19395	0.89	-1.7
4,197,194	+				-1.7
4,197,195	-				-0.2
4,197,214	+				-1.2
4,197,214	+				+0.2
4,197,214	+				-0.9
4,197,214	+				+1.5
4,197,215	-				-0.7
4,197,215	-				-0.7
4,197,215	-				+0.3
4,197,215	-				-0.1
4,197,215	-				-0.4
4,197,215	-				+0.1
4,197,219	+				-0.2
4,197,220	-				-0.5
4,197,220	-				+0.8
4,197,220	-				+1.4
4,197,237	-				-1.5
4,198,294	-		DZA65_RS19405	0.32	-1.7
4,198,355	-		DZA65_RS19405	0.45	-0.4
4,198,355	-		DZA65_RS19405	0.45	+0.1
4,198,355	-		DZA65_RS19405	0.45	-0.5
4,198,573	-				-0.4
4,198,573	-				-0.5