Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,186,588	-		DZA65_RS19355	0.46	-1.8
4,186,600	-		DZA65_RS19355	0.47	-0.9
4,186,629	+		DZA65_RS19355	0.49	-0.4
4,186,630	-		DZA65_RS19355	0.50	+0.2
4,186,674	-		DZA65_RS19355	0.54	+0.7
4,186,674	-		DZA65_RS19355	0.54	-1.5
4,186,677	-		DZA65_RS19355	0.54	-1.5
4,186,677	-		DZA65_RS19355	0.54	-1.8
4,186,772	+		DZA65_RS19355	0.63	-0.2
4,186,773	-		DZA65_RS19355	0.63	+0.1
4,186,773	-		DZA65_RS19355	0.63	-0.9
4,186,773	-		DZA65_RS19355	0.63	+0.1
4,186,773	-		DZA65_RS19355	0.63	-0.7
4,186,773	-		DZA65_RS19355	0.63	-1.7
4,186,780	+		DZA65_RS19355	0.64	-1.4
4,186,847	+		DZA65_RS19355	0.70	-0.9
4,186,865	+		DZA65_RS19355	0.71	-1.1
4,186,865	+		DZA65_RS19355	0.71	-0.5
4,186,866	-		DZA65_RS19355	0.72	-0.5
4,186,872	+		DZA65_RS19355	0.72	+2.7
4,186,872	+		DZA65_RS19355	0.72	-1.9
4,186,872	+		DZA65_RS19355	0.72	+0.3
4,186,873	-		DZA65_RS19355	0.72	-1.4
4,186,873	-		DZA65_RS19355	0.72	-0.5
4,186,873	-		DZA65_RS19355	0.72	-0.5
4,186,873	-		DZA65_RS19355	0.72	-1.1
4,186,873	-		DZA65_RS19355	0.72	-1.2
4,186,904	+		DZA65_RS19355	0.75	+1.1
4,186,905	-		DZA65_RS19355	0.75	-0.9
4,186,968	+		DZA65_RS19355	0.81	-0.1
4,186,973	-		DZA65_RS19355	0.82	+0.3
4,186,998	+		DZA65_RS19355	0.84	-1.1
4,186,999	-		DZA65_RS19355	0.84	-0.2
4,186,999	-		DZA65_RS19355	0.84	-0.5
4,187,003	+		DZA65_RS19355	0.84	-0.5
4,187,003	+		DZA65_RS19355	0.84	+0.1
4,187,003	+		DZA65_RS19355	0.84	-1.1
4,187,003	+		DZA65_RS19355	0.84	-0.6
4,187,004	-		DZA65_RS19355	0.84	-0.7
4,187,007	+				+0.3
4,187,008	-		DZA65_RS19355	0.85	-0.3
4,187,023	-		DZA65_RS19355	0.86	+1.3
4,187,031	+		DZA65_RS19355	0.87	-0.3
4,187,031	+		DZA65_RS19355	0.87	-0.7
4,187,036	-		DZA65_RS19355	0.87	+0.3
4,187,149	-				-1.9
4,187,172	+				+0.1
4,187,205	-				-1.1
4,187,239	-				+0.1
4,187,290	+				-1.3
4,187,291	-				-0.3
4,187,291	-				-1.2
4,187,291	-				-2.4
4,187,292	+				+0.3
4,187,292	+				-0.8
4,187,292	+				+0.2
4,187,292	+				+0.4
4,187,293	-				-1.0
4,187,293	-				-0.8
4,187,293	-				+0.1
4,187,297	+				-0.7
4,187,297	+				-0.7
4,187,298	-				-1.7
4,187,335	+				-0.4
4,187,369	+				-0.4
4,187,421	+				-2.0
4,187,421	+				+1.1
4,187,422	-				-0.4
4,187,422	-				-0.9
4,187,440	+				-1.6
4,187,453	+				-1.3
4,187,454	-				-0.5
4,187,454	-				-1.5
4,187,454	-				-0.5
4,187,454	-				+0.3
4,187,455	+				+1.4
4,187,455	+				-1.2
4,187,455	+				+0.1
4,187,455	+				-0.2
4,187,455	+				-0.3
4,187,455	+				+0.3
4,187,455	+				+0.2
4,187,455	+				-2.5
4,187,456	-				-1.5
4,187,456	-				-1.1
4,187,456	-				-0.8
4,187,456	-				-0.7
4,187,456	-				-0.5
4,187,456	-				-2.4
4,187,456	-				+0.9
4,187,459	+				-1.0
4,187,459	+				-0.3
4,187,459	+				-0.5
4,187,459	+				-1.7
4,187,459	+				-0.3
4,187,459	+				-0.8
4,187,459	+				+0.1
4,187,459	+				-2.6
4,187,459	+				-2.1
4,187,459	+				+0.5
4,187,459	+				-1.5
4,187,459	+				+0.4
4,187,459	+				+1.5
4,187,460	-				-1.9
4,187,460	-				-0.8
4,187,460	-				-1.2
4,187,460	-				-2.5
4,187,460	-				-0.1
4,187,460	-				+0.1
4,187,470	-				-0.5
4,187,998	-				-1.9
4,188,010	-				-1.9
4,188,042	-				-1.7
4,188,042	-				+1.7
4,188,043	+				-1.2
4,188,093	-				-1.5
4,188,093	-				+2.7
4,188,096	+				-0.9
4,188,096	+				-0.5
4,188,096	+				+0.3
4,188,096	+				+1.1
4,188,097	-				-0.7
4,188,115	+				+0.1
4,188,115	+				-0.5
4,188,116	-				-0.8
4,188,118	-				+1.3
4,188,118	-				+0.7
4,188,137	-				-2.2
4,188,185	+		DZA65_RS19365	0.15	-1.7
4,188,278	+		DZA65_RS19365	0.35	-0.9
4,188,278	+		DZA65_RS19365	0.35	-0.6
4,188,278	+		DZA65_RS19365	0.35	-0.9
4,188,278	+		DZA65_RS19365	0.35	+0.1
4,188,279	-		DZA65_RS19365	0.35	-0.1
4,188,279	-		DZA65_RS19365	0.35	+0.2
4,188,279	-		DZA65_RS19365	0.35	+0.1
4,188,279	-		DZA65_RS19365	0.35	+0.5
4,188,280	+		DZA65_RS19365	0.35	-0.5
4,188,280	+		DZA65_RS19365	0.35	+0.8
4,188,280	+		DZA65_RS19365	0.35	-0.1
4,188,281	-		DZA65_RS19365	0.35	+1.1
4,188,281	-		DZA65_RS19365	0.35	+1.1
4,188,281	-		DZA65_RS19365	0.35	-2.0
4,188,281	-		DZA65_RS19365	0.35	+2.1
4,188,281	-		DZA65_RS19365	0.35	+0.3
4,188,478	+		DZA65_RS19365	0.77	-1.1
4,188,478	+		DZA65_RS19365	0.77	-1.5
4,188,479	-		DZA65_RS19365	0.77	+0.1
4,188,479	-		DZA65_RS19365	0.77	-1.7
4,188,503	+		DZA65_RS19365	0.83	-1.5
4,188,503	+		DZA65_RS19365	0.83	-1.7
4,188,504	-		DZA65_RS19365	0.83	+1.1
4,188,507	+		DZA65_RS19365	0.83	-0.7
4,188,507	+		DZA65_RS19365	0.83	-1.5
4,188,508	-		DZA65_RS19365	0.84	-0.5
4,188,508	-		DZA65_RS19365	0.84	-0.7
4,188,508	-		DZA65_RS19365	0.84	+0.7
4,188,508	-		DZA65_RS19365	0.84	-1.2
4,188,508	-		DZA65_RS19365	0.84	-0.1
4,188,508	-		DZA65_RS19365	0.84	-1.2
4,188,513	-		DZA65_RS19365	0.85	-0.0
4,188,625	+				-0.9
4,188,625	+				+0.1
4,188,625	+				-1.5
4,188,697	+		DZA65_RS19370	0.16	+0.4
4,188,697	+				-0.5
4,188,698	-		DZA65_RS19370	0.16	-1.2
4,188,836	-		DZA65_RS19370	0.34	-2.2
4,188,836	-		DZA65_RS19370	0.34	-2.7
4,188,844	+		DZA65_RS19370	0.35	-1.3
4,188,844	+		DZA65_RS19370	0.35	-0.9
4,188,888	+		DZA65_RS19370	0.41	+2.1
4,188,888	+		DZA65_RS19370	0.41	+0.7
4,188,888	+		DZA65_RS19370	0.41	-1.3
4,188,888	+		DZA65_RS19370	0.41	-0.9
4,188,888	+		DZA65_RS19370	0.41	-0.7
4,188,888	+		DZA65_RS19370	0.41	+0.3
4,188,888	+		DZA65_RS19370	0.41	-1.7
4,188,888	+		DZA65_RS19370	0.41	-0.3
4,188,888	+		DZA65_RS19370	0.41	-1.1
4,188,888	+		DZA65_RS19370	0.41	+0.8
4,188,888	+		DZA65_RS19370	0.41	-0.8
4,188,888	+		DZA65_RS19370	0.41	+0.5
4,188,888	+		DZA65_RS19370	0.41	-0.2
4,188,888	+		DZA65_RS19370	0.41	-1.2
4,188,888	+		DZA65_RS19370	0.41	-0.4
4,188,888	+		DZA65_RS19370	0.41	-0.2
4,188,888	+		DZA65_RS19370	0.41	-1.0
4,188,888	+		DZA65_RS19370	0.41	-0.5
4,188,888	+		DZA65_RS19370	0.41	-0.9
4,188,889	-		DZA65_RS19370	0.41	-0.9
4,188,889	-		DZA65_RS19370	0.41	-0.9
4,188,889	-		DZA65_RS19370	0.41	-0.7
4,188,889	-		DZA65_RS19370	0.41	-0.8
4,188,889	-		DZA65_RS19370	0.41	-1.4
4,188,889	-		DZA65_RS19370	0.41	-1.8
4,188,889	-		DZA65_RS19370	0.41	-1.5
4,188,889	-		DZA65_RS19370	0.41	-0.7
4,188,889	-		DZA65_RS19370	0.41	-1.0
4,188,889	-		DZA65_RS19370	0.41	-0.1
4,188,889	-		DZA65_RS19370	0.41	-0.9
4,188,889	-		DZA65_RS19370	0.41	-0.2
4,188,889	-		DZA65_RS19370	0.41	+1.1
4,188,889	-		DZA65_RS19370	0.41	+0.4
4,188,889	-		DZA65_RS19370	0.41	-0.5
4,188,889	-		DZA65_RS19370	0.41	-0.3
4,188,889	-		DZA65_RS19370	0.41	-0.7