Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS18990 and DZA65_RS18995 are separated by 214 nucleotides DZA65_RS18995 and DZA65_RS19000 are separated by 13 nucleotides
DZA65_RS18990: DZA65_RS18990 - dihydrolipoyl dehydrogenase, at 4,103,484 to 4,104,908
_RS18990
DZA65_RS18995: DZA65_RS18995 - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 4,105,123 to 4,106,985
_RS18995
DZA65_RS19000: DZA65_RS19000 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 4,106,999 to 4,109,662
_RS19000
Position (kb)
4105
4106
4107 Strain fitness (log2 ratio)
-1
0
1 at 4105.042 kb on - strand at 4105.056 kb on - strand at 4105.056 kb on - strand at 4105.056 kb on - strand at 4105.056 kb on - strand at 4105.065 kb on + strand at 4105.065 kb on + strand at 4105.066 kb on - strand at 4105.066 kb on - strand at 4105.066 kb on - strand at 4105.066 kb on - strand at 4105.066 kb on - strand at 4105.087 kb on - strand at 4105.087 kb on - strand at 4105.124 kb on + strand at 4107.001 kb on - strand at 4107.001 kb on - strand at 4107.001 kb on - strand at 4107.001 kb on - strand at 4107.001 kb on - strand at 4107.001 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,105,042 - +1.0 4,105,056 - +0.0 4,105,056 - +0.3 4,105,056 - -0.2 4,105,056 - -1.1 4,105,065 + +0.6 4,105,065 + -0.8 4,105,066 - -0.8 4,105,066 - -0.2 4,105,066 - -1.3 4,105,066 - -0.5 4,105,066 - +0.8 4,105,087 - -1.0 4,105,087 - +0.8 4,105,124 + +0.3 4,107,001 - -0.4 4,107,001 - +0.0 4,107,001 - -0.1 4,107,001 - +0.0 4,107,001 - -1.1 4,107,001 - -0.5
Or see this region's nucleotide sequence