Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,877,893	-		DZA65_RS18020	0.21	-0.8
3,877,893	-		DZA65_RS18020	0.21	-2.3
3,877,893	-		DZA65_RS18020	0.21	-0.4
3,877,898	+		DZA65_RS18020	0.22	-0.3
3,877,910	+		DZA65_RS18020	0.23	+0.3
3,877,911	-		DZA65_RS18020	0.23	+0.3
3,878,004	-		DZA65_RS18020	0.33	-0.2
3,878,039	+		DZA65_RS18020	0.36	+0.1
3,878,039	+		DZA65_RS18020	0.36	+0.3
3,878,039	+		DZA65_RS18020	0.36	-0.6
3,878,039	+		DZA65_RS18020	0.36	-1.0
3,878,039	+		DZA65_RS18020	0.36	-0.0
3,878,040	-		DZA65_RS18020	0.36	-0.8
3,878,040	-		DZA65_RS18020	0.36	-1.7
3,878,040	-		DZA65_RS18020	0.36	-0.1
3,878,040	-		DZA65_RS18020	0.36	-1.2
3,878,040	-		DZA65_RS18020	0.36	+1.6
3,878,040	-		DZA65_RS18020	0.36	-0.8
3,878,040	-		DZA65_RS18020	0.36	-0.0
3,878,063	+		DZA65_RS18020	0.39	+1.0
3,878,063	+		DZA65_RS18020	0.39	+0.2
3,878,064	-		DZA65_RS18020	0.39	-0.0
3,878,140	+		DZA65_RS18020	0.46	-1.8
3,878,140	+		DZA65_RS18020	0.46	+2.0
3,878,141	-		DZA65_RS18020	0.46	-0.6
3,878,141	-		DZA65_RS18020	0.46	-0.6
3,878,141	-		DZA65_RS18020	0.46	+0.8
3,878,168	+		DZA65_RS18020	0.49	+0.2
3,878,168	+		DZA65_RS18020	0.49	+0.4
3,878,169	-		DZA65_RS18020	0.49	-0.0
3,878,169	-		DZA65_RS18020	0.49	+0.1
3,878,169	-		DZA65_RS18020	0.49	+0.4
3,878,169	-		DZA65_RS18020	0.49	-0.7
3,878,172	+		DZA65_RS18020	0.50	-0.7
3,878,172	+		DZA65_RS18020	0.50	+1.0
3,878,173	-		DZA65_RS18020	0.50	-1.3
3,878,173	-		DZA65_RS18020	0.50	-0.0
3,878,180	+		DZA65_RS18020	0.50	+1.0
3,878,181	-		DZA65_RS18020	0.50	+1.6
3,878,239	+		DZA65_RS18020	0.56	+0.7
3,878,239	+		DZA65_RS18020	0.56	-0.8
3,878,239	+		DZA65_RS18020	0.56	-1.6
3,878,239	+		DZA65_RS18020	0.56	+0.4
3,878,239	+		DZA65_RS18020	0.56	-1.0
3,878,239	+		DZA65_RS18020	0.56	+1.6
3,878,239	+		DZA65_RS18020	0.56	-0.4
3,878,239	+		DZA65_RS18020	0.56	+0.3
3,878,240	-		DZA65_RS18020	0.56	+0.4
3,878,240	-		DZA65_RS18020	0.56	+0.1
3,878,291	+		DZA65_RS18020	0.62	+0.3
3,878,292	-		DZA65_RS18020	0.62	-0.4
3,878,381	+		DZA65_RS18020	0.71	+0.1
3,878,381	+		DZA65_RS18020	0.71	-0.3
3,878,382	-		DZA65_RS18020	0.71	-0.1
3,878,393	+		DZA65_RS18020	0.72	+2.0
3,878,394	-		DZA65_RS18020	0.72	-0.8
3,878,440	+		DZA65_RS18020	0.77	-0.4
3,878,440	+		DZA65_RS18020	0.77	+0.6
3,878,440	+		DZA65_RS18020	0.77	-0.0
3,878,491	+		DZA65_RS18020	0.82	-0.2
3,878,491	+		DZA65_RS18020	0.82	+0.7
3,878,491	+		DZA65_RS18020	0.82	-0.6
3,878,491	+				-1.6
3,878,492	-		DZA65_RS18020	0.82	-0.3
3,878,492	-		DZA65_RS18020	0.82	+0.4
3,878,492	-		DZA65_RS18020	0.82	+0.3
3,878,492	-		DZA65_RS18020	0.82	+0.4
3,878,492	-		DZA65_RS18020	0.82	-0.8
3,878,553	+		DZA65_RS18020	0.88	+1.2
3,878,554	-		DZA65_RS18020	0.88	+0.7
3,878,672	+				-0.6
3,878,672	+				-0.1
3,878,672	+				+0.2
3,878,672	+				+0.4
3,878,672	+				-1.8
3,878,672	+				-0.4
3,878,673	-				+0.4
3,878,673	-				+2.0
3,878,673	-				-0.0
3,878,683	+				+1.0
3,878,684	-				-1.1
3,878,706	-				-1.6
3,878,713	+				-0.6
3,878,713	+				-2.3
3,878,713	+				-0.6
3,878,713	+				-1.3
3,878,713	+				-1.4
3,878,713	+				+0.3
3,878,713	+				-0.5
3,878,714	-				-2.6
3,878,714	-				-1.0
3,878,714	-				-1.0
3,878,714	-				-0.6
3,878,714	-				-1.0
3,878,727	+				-0.3
3,878,728	-				-0.6
3,879,969	-				+0.3
3,879,969	-				-1.7
3,879,969	-				+0.2
3,879,969	-				-0.6
3,879,969	-				-1.0
3,880,008	-				-0.4
3,880,008	-				-1.0
3,880,008	-				-0.0
3,880,008	-				-0.0
3,880,008	-				-0.3
3,880,062	+				-1.8
3,880,063	-				-1.0
3,880,063	-				-1.3
3,880,072	-				-0.3
3,880,083	+				-1.0
3,880,084	-				-1.8
3,880,107	-				-0.8
3,880,111	+				+1.0
3,880,112	-				+1.0
3,880,112	-				-1.3
3,880,112	-				-1.0
3,880,112	-				-0.0
3,880,177	+				-1.2
3,880,184	-				-1.2
3,880,184	-				+0.6
3,880,184	-				+0.4
3,880,202	+				-2.0
3,880,202	+				-1.6
3,880,202	+				-0.8
3,880,203	-				-1.0
3,880,213	+				-0.5
3,880,213	+				-0.1
3,880,213	+				+1.0
3,880,214	-				+3.0
3,880,214	-				+1.3
3,880,214	-				-0.1
3,880,257	+				+0.4
3,880,319	-				-0.4
3,880,349	+		DZA65_RS18030	0.14	+2.3
3,880,350	-		DZA65_RS18030	0.15	+0.2
3,880,350	-				+1.3
3,880,371	-		DZA65_RS18030	0.18	-1.6
3,880,379	+		DZA65_RS18030	0.19	-0.1
3,880,379	+		DZA65_RS18030	0.19	-0.0
3,880,379	+		DZA65_RS18030	0.19	-0.3
3,880,379	+		DZA65_RS18030	0.19	-0.6
3,880,535	-		DZA65_RS18030	0.44	+0.7
3,880,535	-		DZA65_RS18030	0.44	-0.1
3,880,577	+		DZA65_RS18030	0.51	-0.3
3,880,613	-		DZA65_RS18030	0.56	-1.5
3,880,701	+		DZA65_RS18030	0.70	-1.0
3,880,701	+		DZA65_RS18030	0.70	-0.3
3,880,701	+		DZA65_RS18030	0.70	-0.6
3,880,701	+		DZA65_RS18030	0.70	-0.3
3,880,701	+		DZA65_RS18030	0.70	-1.2
3,880,701	+		DZA65_RS18030	0.70	-1.0
3,880,701	+		DZA65_RS18030	0.70	-0.6
3,880,702	-		DZA65_RS18030	0.71	+1.3
3,880,702	-		DZA65_RS18030	0.71	-0.9
3,880,747	+		DZA65_RS18030	0.78	-0.0
3,880,747	+		DZA65_RS18030	0.78	-0.6
3,880,747	+		DZA65_RS18030	0.78	-0.0
3,880,752	+		DZA65_RS18030	0.79	-0.2
3,880,752	+		DZA65_RS18030	0.79	+1.0
3,880,753	-		DZA65_RS18030	0.79	-0.0
3,880,759	+		DZA65_RS18030	0.80	-0.6
3,880,760	-		DZA65_RS18030	0.80	-0.0
3,880,760	-		DZA65_RS18030	0.80	-0.2
3,880,876	+				+0.3
3,880,876	+				-0.8
3,880,939	-				-0.8