Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,849,852	+		DZA65_RS17880	0.55	-1.0
3,849,953	+		DZA65_RS17880	0.64	-0.6
3,850,083	-		DZA65_RS17880	0.74	-1.7
3,850,471	+				+0.1
3,850,472	-				-1.8
3,850,472	-				-2.5
3,850,481	+				+0.6
3,850,524	-				-0.7
3,850,550	-				-1.6
3,850,620	-		DZA65_RS17885	0.11	+0.2
3,850,680	+		DZA65_RS17885	0.17	+0.7
3,850,682	+		DZA65_RS17885	0.17	+0.4
3,850,683	-		DZA65_RS17885	0.17	-0.3
3,850,710	+		DZA65_RS17885	0.20	+0.2
3,850,710	+		DZA65_RS17885	0.20	-0.2
3,850,710	+		DZA65_RS17885	0.20	-2.7
3,850,710	+		DZA65_RS17885	0.20	-2.0
3,850,791	+		DZA65_RS17885	0.28	-1.0
3,850,791	+		DZA65_RS17885	0.28	-0.4
3,850,791	+		DZA65_RS17885	0.28	-0.6
3,850,791	+		DZA65_RS17885	0.28	-0.4
3,850,792	-		DZA65_RS17885	0.28	-0.0
3,850,792	-		DZA65_RS17885	0.28	-0.5
3,850,792	-		DZA65_RS17885	0.28	-0.2
3,850,822	-		DZA65_RS17885	0.31	-1.6
3,850,826	+		DZA65_RS17885	0.32	+0.6
3,850,836	+		DZA65_RS17885	0.33	-0.0
3,850,837	-		DZA65_RS17885	0.33	+2.0
3,850,890	+		DZA65_RS17885	0.38	-0.8
3,851,032	-		DZA65_RS17885	0.52	-1.0
3,851,066	+		DZA65_RS17885	0.56	-0.2
3,851,066	+		DZA65_RS17885	0.56	-0.5
3,851,071	-		DZA65_RS17885	0.56	-0.6
3,851,071	-		DZA65_RS17885	0.56	-0.5
3,851,127	+		DZA65_RS17885	0.62	-0.0
3,851,145	+		DZA65_RS17885	0.64	-1.3
3,851,186	-		DZA65_RS17885	0.68	-0.1
3,851,186	-		DZA65_RS17885	0.68	-1.0
3,851,186	-		DZA65_RS17885	0.68	-0.6
3,851,186	-		DZA65_RS17885	0.68	+0.7
3,851,258	+		DZA65_RS17885	0.75	-1.5
3,851,259	-		DZA65_RS17885	0.75	-0.4
3,851,262	+		DZA65_RS17885	0.75	-1.7
3,851,263	-		DZA65_RS17885	0.75	-1.3
3,851,263	-		DZA65_RS17885	0.75	-0.0
3,851,263	-		DZA65_RS17885	0.75	-0.0
3,851,505	+				-1.2
3,851,505	+				-2.2
3,851,505	+				+0.5
3,851,505	+				-0.2
3,851,505	+				+0.2
3,851,505	+				+0.6
3,851,505	+				-0.5
3,851,506	-				+0.2
3,851,506	-				-1.3
3,851,506	-				-2.0
3,851,506	-				+0.7
3,851,506	-				-1.5
3,851,524	-				-1.7
3,851,561	+				-0.4
3,851,561	+				-0.2
3,851,561	+				-0.8
3,851,561	+				-0.6
3,851,562	-				-0.4
3,851,562	-				-0.0
3,851,562	-				-0.6
3,851,562	-				-1.8
3,851,562	-				-0.7
3,851,562	-				-1.0
3,851,611	+				+1.0
3,851,620	+				-2.7
3,851,651	-				+1.0
3,851,667	-				+0.7
3,851,667	-				-1.3
3,851,673	+				-0.6
3,851,674	-				-0.2
3,851,706	+				-0.2
3,851,715	-				-1.2
3,851,718	-				-1.3
3,851,753	+				+1.3
3,851,754	-				-1.3
3,851,754	-				-0.2
3,851,763	+				-1.5
3,851,763	+				-1.2
3,851,763	+				+0.5
3,851,763	+				+0.2
3,851,763	+				-2.0
3,851,763	+				-1.5
3,851,763	+				+1.0
3,851,763	+				-1.1
3,851,763	+				-3.3
3,851,763	+				+0.4
3,851,763	+				-0.3
3,851,763	+				-0.0
3,851,764	-				-2.0
3,851,764	-				-0.7
3,851,764	-				-0.4
3,851,764	-				-2.6
3,851,764	-				-0.6
3,851,764	-				-1.2
3,851,764	-				+1.0
3,851,764	-				-0.2
3,851,764	-				+0.2
3,851,764	-				-1.5
3,851,764	-				-0.6
3,851,882	+				+0.2
3,851,906	-				-0.6
3,851,923	-				-1.8
3,852,014	+				+0.3
3,852,014	+				-0.4
3,852,123	+		DZA65_RS17890	0.17	-2.3
3,852,123	+		DZA65_RS17890	0.17	-0.9
3,852,123	+		DZA65_RS17890	0.17	+0.6
3,852,176	+		DZA65_RS17890	0.25	-0.3
3,852,176	+		DZA65_RS17890	0.25	-0.6
3,852,176	+		DZA65_RS17890	0.25	-0.5
3,852,176	+		DZA65_RS17890	0.25	-1.0
3,852,176	+		DZA65_RS17890	0.25	+0.1
3,852,177	-		DZA65_RS17890	0.25	-0.4
3,852,177	-		DZA65_RS17890	0.25	-2.2
3,852,214	+		DZA65_RS17890	0.31	-1.0
3,852,214	+		DZA65_RS17890	0.31	-2.6
3,852,214	+		DZA65_RS17890	0.31	-1.3
3,852,214	+		DZA65_RS17890	0.31	-0.3
3,852,214	+		DZA65_RS17890	0.31	-1.3
3,852,214	+				-2.2
3,852,215	-		DZA65_RS17890	0.31	-0.5
3,852,215	-		DZA65_RS17890	0.31	-1.2
3,852,215	-		DZA65_RS17890	0.31	-0.4
3,852,229	-		DZA65_RS17890	0.33	-0.3
3,852,276	-		DZA65_RS17890	0.40	-0.3
3,852,433	+		DZA65_RS17890	0.63	-0.0
3,852,440	+		DZA65_RS17890	0.64	+0.5
3,852,459	+		DZA65_RS17890	0.67	-1.8
3,852,488	+		DZA65_RS17890	0.71	-0.6
3,852,488	+		DZA65_RS17890	0.71	-1.8
3,852,488	+		DZA65_RS17890	0.71	+2.6
3,852,489	-		DZA65_RS17890	0.71	-0.2
3,852,502	+		DZA65_RS17890	0.73	-0.6