Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17065

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,682,667	+				-0.5
3,682,667	+				+1.0
3,682,668	-				-1.0
3,682,668	-				+1.0
3,682,687	+				-0.5
3,682,688	-				-1.7
3,682,688	-				-1.4
3,682,736	-				-2.0
3,682,758	+		DZA65_RS17060	0.11	-0.4
3,682,758	+		DZA65_RS17060	0.11	-1.8
3,682,759	-		DZA65_RS17060	0.11	-2.5
3,682,809	+		DZA65_RS17060	0.17	-0.7
3,682,884	+		DZA65_RS17060	0.24	-0.9
3,682,885	-		DZA65_RS17060	0.24	-2.4
3,682,885	-		DZA65_RS17060	0.24	-0.9
3,682,885	-		DZA65_RS17060	0.24	-1.0
3,682,935	+		DZA65_RS17060	0.29	-0.0
3,682,936	-		DZA65_RS17060	0.29	-1.4
3,682,936	-		DZA65_RS17060	0.29	-1.0
3,682,937	+		DZA65_RS17060	0.29	-2.4
3,682,937	+		DZA65_RS17060	0.29	-0.1
3,682,938	-		DZA65_RS17060	0.30	+0.4
3,682,938	-		DZA65_RS17060	0.30	-1.5
3,682,938	-		DZA65_RS17060	0.30	-1.0
3,682,962	+		DZA65_RS17060	0.32	-1.5
3,682,962	+		DZA65_RS17060	0.32	-0.3
3,682,964	+		DZA65_RS17060	0.32	+0.3
3,682,964	+		DZA65_RS17060	0.32	-0.2
3,682,964	+		DZA65_RS17060	0.32	-1.8
3,682,964	+		DZA65_RS17060	0.32	+0.2
3,682,964	+		DZA65_RS17060	0.32	-0.8
3,682,964	+		DZA65_RS17060	0.32	-0.6
3,682,964	+		DZA65_RS17060	0.32	-0.3
3,682,964	+		DZA65_RS17060	0.32	+1.0
3,682,964	+		DZA65_RS17060	0.32	-2.1
3,682,964	+		DZA65_RS17060	0.32	-1.2
3,682,964	+		DZA65_RS17060	0.32	+0.2
3,682,964	+		DZA65_RS17060	0.32	-1.0
3,682,964	+		DZA65_RS17060	0.32	-0.6
3,682,964	+		DZA65_RS17060	0.32	-1.0
3,682,964	+		DZA65_RS17060	0.32	-1.6
3,682,965	-		DZA65_RS17060	0.32	-0.0
3,682,965	-		DZA65_RS17060	0.32	-0.0
3,682,965	-				-0.6
3,682,965	-		DZA65_RS17060	0.32	-2.5
3,682,965	-		DZA65_RS17060	0.32	-0.0
3,682,965	-		DZA65_RS17060	0.32	-1.4
3,682,965	-		DZA65_RS17060	0.32	-0.0
3,682,965	-		DZA65_RS17060	0.32	-1.5
3,682,965	-		DZA65_RS17060	0.32	-2.4
3,682,965	-		DZA65_RS17060	0.32	-1.9
3,682,965	-		DZA65_RS17060	0.32	-0.0
3,682,965	-		DZA65_RS17060	0.32	-0.4
3,682,965	-		DZA65_RS17060	0.32	-2.6
3,682,965	-		DZA65_RS17060	0.32	-3.2
3,683,271	+		DZA65_RS17060	0.63	-1.5
3,683,271	+		DZA65_RS17060	0.63	-0.4
3,683,271	+		DZA65_RS17060	0.63	-1.1
3,683,271	+		DZA65_RS17060	0.63	-0.9
3,683,271	+		DZA65_RS17060	0.63	+0.3
3,683,271	+		DZA65_RS17060	0.63	-2.4
3,683,271	+		DZA65_RS17060	0.63	-0.8
3,683,272	-		DZA65_RS17060	0.63	-0.7
3,683,321	-		DZA65_RS17060	0.68	-0.5
3,683,390	+		DZA65_RS17060	0.75	-0.6
3,683,390	+		DZA65_RS17060	0.75	-2.1
3,683,391	-		DZA65_RS17060	0.75	-2.0
3,683,391	-		DZA65_RS17060	0.75	-1.5
3,683,391	-		DZA65_RS17060	0.75	-1.6
3,683,463	+		DZA65_RS17060	0.82	-3.5
3,683,464	-		DZA65_RS17060	0.82	+2.0
3,683,464	-		DZA65_RS17060	0.82	-1.3
3,683,464	-		DZA65_RS17060	0.82	-2.3
3,683,464	-		DZA65_RS17060	0.82	-0.9
3,683,464	-		DZA65_RS17060	0.82	-0.7
3,683,517	+		DZA65_RS17060	0.88	-2.0
3,683,711	+				-0.6
3,683,712	-				+0.4
3,683,766	+		DZA65_RS17065	0.16	-1.4
3,683,766	+		DZA65_RS17065	0.16	-2.0
3,683,766	+				-1.4
3,683,766	+		DZA65_RS17065	0.16	+0.3
3,683,766	+		DZA65_RS17065	0.16	-0.9
3,683,767	-		DZA65_RS17065	0.16	-2.9
3,683,767	-		DZA65_RS17065	0.16	-1.9
3,683,767	-		DZA65_RS17065	0.16	-0.0
3,683,767	-		DZA65_RS17065	0.16	-0.4
3,683,767	-		DZA65_RS17065	0.16	-2.0
3,683,767	-		DZA65_RS17065	0.16	-1.4
3,683,776	-		DZA65_RS17065	0.17	-1.2
3,683,776	-		DZA65_RS17065	0.17	-0.5
3,683,803	+		DZA65_RS17065	0.20	+1.0
3,683,804	-		DZA65_RS17065	0.20	-1.3
3,683,873	-		DZA65_RS17065	0.28	-1.9
3,683,890	-		DZA65_RS17065	0.30	-0.4
3,683,958	-		DZA65_RS17065	0.37	-1.3
3,684,024	+		DZA65_RS17065	0.45	-2.6
3,684,025	-		DZA65_RS17065	0.45	-0.6
3,684,025	-		DZA65_RS17065	0.45	-2.4
3,684,025	-		DZA65_RS17065	0.45	-1.8
3,684,025	-		DZA65_RS17065	0.45	-1.4
3,684,025	-		DZA65_RS17065	0.45	-1.6
3,684,041	+		DZA65_RS17065	0.47	-1.4
3,684,041	+		DZA65_RS17065	0.47	-1.7
3,684,041	+		DZA65_RS17065	0.47	-0.6
3,684,041	+		DZA65_RS17065	0.47	+0.2
3,684,041	+		DZA65_RS17065	0.47	-1.5
3,684,042	-		DZA65_RS17065	0.47	-0.2
3,684,042	-		DZA65_RS17065	0.47	-0.6
3,684,042	-		DZA65_RS17065	0.47	-1.1
3,684,042	-		DZA65_RS17065	0.47	-1.0
3,684,072	+		DZA65_RS17065	0.50	-0.6
3,684,072	+		DZA65_RS17065	0.50	-0.4
3,684,072	+		DZA65_RS17065	0.50	-1.9
3,684,073	-		DZA65_RS17065	0.50	-0.2
3,684,073	-		DZA65_RS17065	0.50	-1.1
3,684,109	-		DZA65_RS17065	0.54	-0.6
3,684,110	+		DZA65_RS17065	0.55	-0.9
3,684,110	+		DZA65_RS17065	0.55	-1.9
3,684,110	+		DZA65_RS17065	0.55	-0.6
3,684,110	+		DZA65_RS17065	0.55	-1.0
3,684,110	+		DZA65_RS17065	0.55	-1.8
3,684,110	+		DZA65_RS17065	0.55	+0.4
3,684,110	+		DZA65_RS17065	0.55	-2.0
3,684,110	+		DZA65_RS17065	0.55	-2.7
3,684,110	+		DZA65_RS17065	0.55	-1.0
3,684,110	+		DZA65_RS17065	0.55	+0.1
3,684,110	+		DZA65_RS17065	0.55	-1.0
3,684,111	-		DZA65_RS17065	0.55	-2.2
3,684,111	-		DZA65_RS17065	0.55	-2.2
3,684,111	-		DZA65_RS17065	0.55	-0.4
3,684,111	-		DZA65_RS17065	0.55	-1.5
3,684,141	+		DZA65_RS17065	0.58	-2.2
3,684,141	+		DZA65_RS17065	0.58	-0.4
3,684,141	+		DZA65_RS17065	0.58	-1.5
3,684,141	+		DZA65_RS17065	0.58	-1.2
3,684,141	+		DZA65_RS17065	0.58	-1.1
3,684,141	+		DZA65_RS17065	0.58	+1.0
3,684,141	+		DZA65_RS17065	0.58	-1.8
3,684,141	+		DZA65_RS17065	0.58	-1.2
3,684,141	+		DZA65_RS17065	0.58	-0.9
3,684,141	+		DZA65_RS17065	0.58	-1.6
3,684,141	+				-0.6
3,684,141	+		DZA65_RS17065	0.58	-2.5
3,684,141	+		DZA65_RS17065	0.58	-2.4
3,684,141	+		DZA65_RS17065	0.58	+2.6
3,684,141	+		DZA65_RS17065	0.58	-0.2
3,684,141	+				-2.0
3,684,141	+		DZA65_RS17065	0.58	-1.3
3,684,141	+		DZA65_RS17065	0.58	-0.6
3,684,141	+		DZA65_RS17065	0.58	-1.0
3,684,141	+		DZA65_RS17065	0.58	-0.6
3,684,141	+		DZA65_RS17065	0.58	-2.4
3,684,141	+				-1.4
3,684,141	+		DZA65_RS17065	0.58	-2.9
3,684,141	+		DZA65_RS17065	0.58	-0.0
3,684,141	+		DZA65_RS17065	0.58	-0.7
3,684,142	-		DZA65_RS17065	0.58	+1.0
3,684,142	-		DZA65_RS17065	0.58	-1.4
3,684,142	-		DZA65_RS17065	0.58	-1.6
3,684,142	-		DZA65_RS17065	0.58	-0.6
3,684,142	-		DZA65_RS17065	0.58	-2.4
3,684,142	-		DZA65_RS17065	0.58	-1.6
3,684,142	-		DZA65_RS17065	0.58	-0.4
3,684,142	-		DZA65_RS17065	0.58	-0.6
3,684,142	-		DZA65_RS17065	0.58	+0.6
3,684,142	-		DZA65_RS17065	0.58	-1.9
3,684,142	-		DZA65_RS17065	0.58	-2.4
3,684,142	-		DZA65_RS17065	0.58	+1.0
3,684,142	-		DZA65_RS17065	0.58	-2.0
3,684,142	-		DZA65_RS17065	0.58	-1.0
3,684,142	-		DZA65_RS17065	0.58	-0.7
3,684,142	-		DZA65_RS17065	0.58	-0.0
3,684,142	-		DZA65_RS17065	0.58	-1.1
3,684,142	-		DZA65_RS17065	0.58	-1.9
3,684,142	-		DZA65_RS17065	0.58	-3.4
3,684,263	-		DZA65_RS17065	0.72	-0.0
3,684,355	+		DZA65_RS17065	0.82	-0.3
3,684,444	+				-3.4
3,684,444	+				-0.6
3,684,444	+				+0.1
3,684,444	+				-0.4
3,684,445	-				-1.3
3,684,445	-				-0.6
3,684,445	-				-0.6
3,684,445	-				+0.6
3,684,445	-				-1.0
3,684,445	-				-0.6
3,684,445	-				-0.7
3,684,500	-				-2.0
3,684,522	+				-1.6
3,684,522	+				-0.4
3,684,522	+				+0.6
3,684,523	-				-1.3
3,684,524	+				+0.6
3,684,556	+				-0.4
3,684,557	-				-0.0
3,684,557	-				-0.0
3,684,621	+		DZA65_RS17070	0.12	-1.4
3,684,621	+		DZA65_RS17070	0.12	+0.5
3,684,621	+		DZA65_RS17070	0.12	-0.2
3,684,622	-		DZA65_RS17070	0.12	+0.4
3,684,622	-		DZA65_RS17070	0.12	-0.0
3,684,622	-		DZA65_RS17070	0.12	-2.0
3,684,622	-		DZA65_RS17070	0.12	-1.3
3,684,627	+		DZA65_RS17070	0.13	-1.3
3,684,627	+		DZA65_RS17070	0.13	+0.1
3,684,682	+		DZA65_RS17070	0.20	-1.5
3,684,683	-		DZA65_RS17070	0.20	+0.7
3,684,711	+		DZA65_RS17070	0.23	-1.3
3,684,711	+		DZA65_RS17070	0.23	-2.4
3,684,712	-		DZA65_RS17070	0.23	-0.3
3,684,844	+		DZA65_RS17070	0.40	-1.8
3,684,844	+		DZA65_RS17070	0.40	-0.4
3,684,934	-		DZA65_RS17070	0.51	-0.0
3,684,981	+		DZA65_RS17070	0.57	-0.6
3,684,981	+		DZA65_RS17070	0.57	-2.4
3,684,982	-		DZA65_RS17070	0.57	-0.3
3,684,982	-		DZA65_RS17070	0.57	-2.2
3,685,015	+		DZA65_RS17070	0.61	-0.6
3,685,015	+		DZA65_RS17070	0.61	-0.0
3,685,015	+		DZA65_RS17070	0.61	-0.4
3,685,015	+		DZA65_RS17070	0.61	-0.7
3,685,015	+		DZA65_RS17070	0.61	-1.7
3,685,016	-		DZA65_RS17070	0.61	-0.0
3,685,016	-		DZA65_RS17070	0.61	-1.7
3,685,033	+		DZA65_RS17070	0.63	-1.0
3,685,051	+		DZA65_RS17070	0.65	-0.3
3,685,072	+		DZA65_RS17070	0.68	+0.4
3,685,072	+		DZA65_RS17070	0.68	-1.4
3,685,072	+		DZA65_RS17070	0.68	-2.4
3,685,072	+		DZA65_RS17070	0.68	-1.9
3,685,073	-		DZA65_RS17070	0.68	-1.5
3,685,073	-		DZA65_RS17070	0.68	-1.4
3,685,073	-		DZA65_RS17070	0.68	-0.6
3,685,073	-		DZA65_RS17070	0.68	+0.6
3,685,074	+		DZA65_RS17070	0.68	-2.6
3,685,075	-		DZA65_RS17070	0.68	+0.6
3,685,086	-		DZA65_RS17070	0.69	-1.1
3,685,269	+				-2.0
3,685,269	+				-2.6
3,685,269	+				-0.9
3,685,269	+				-0.6
3,685,270	-				-0.6
3,685,270	-				-0.6
3,685,273	+				-1.6
3,685,273	+				-1.0
3,685,274	-				-0.8
3,685,274	-				+1.0
3,685,274	-				+0.7
3,685,333	+				-1.2
3,685,333	+				-1.4
3,685,334	-				-0.8
3,685,334	-				+1.4
3,685,426	-				-1.4
3,685,433	+				-0.3
3,685,434	-				-0.0
3,685,434	-				-0.8
3,685,434	-				-0.0
3,685,455	+				-2.2
3,685,455	+				-0.0
3,685,456	-				-0.0
3,685,456	-				+0.6