Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13745

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,946,652	+		DZA65_RS13740	0.37	+0.1
2,946,787	+		DZA65_RS13740	0.49	+0.8
2,946,788	-		DZA65_RS13740	0.50	-0.2
2,946,838	+		DZA65_RS13740	0.54	-2.4
2,946,839	-		DZA65_RS13740	0.54	-0.8
2,946,839	-		DZA65_RS13740	0.54	-0.2
2,946,872	+		DZA65_RS13740	0.57	-1.5
2,946,873	-		DZA65_RS13740	0.57	+1.8
2,946,873	-		DZA65_RS13740	0.57	-0.5
2,946,873	-		DZA65_RS13740	0.57	+0.2
2,946,883	+				-1.2
2,946,883	+		DZA65_RS13740	0.58	+0.4
2,946,883	+		DZA65_RS13740	0.58	-0.9
2,946,883	+		DZA65_RS13740	0.58	-0.2
2,946,883	+		DZA65_RS13740	0.58	+0.0
2,946,883	+		DZA65_RS13740	0.58	-1.2
2,946,884	-		DZA65_RS13740	0.58	+1.1
2,946,884	-		DZA65_RS13740	0.58	-0.5
2,946,884	-		DZA65_RS13740	0.58	-0.8
2,946,884	-		DZA65_RS13740	0.58	+0.8
2,946,884	-				-2.2
2,946,884	-		DZA65_RS13740	0.58	-0.8
2,946,884	-		DZA65_RS13740	0.58	-0.9
2,946,884	-		DZA65_RS13740	0.58	-0.9
2,946,884	-		DZA65_RS13740	0.58	-1.1
2,946,884	-		DZA65_RS13740	0.58	+0.2
2,946,885	+		DZA65_RS13740	0.58	+0.5
2,946,885	+		DZA65_RS13740	0.58	-0.4
2,946,886	-		DZA65_RS13740	0.58	-2.0
2,946,886	-		DZA65_RS13740	0.58	-0.3
2,946,915	+		DZA65_RS13740	0.61	-0.2
2,946,915	+		DZA65_RS13740	0.61	-2.2
2,946,916	-		DZA65_RS13740	0.61	-1.5
2,946,916	-		DZA65_RS13740	0.61	+0.3
2,946,916	-		DZA65_RS13740	0.61	+0.4
2,946,989	+		DZA65_RS13740	0.68	-1.0
2,946,989	+		DZA65_RS13740	0.68	+0.8
2,946,990	-		DZA65_RS13740	0.68	+0.8
2,947,021	+		DZA65_RS13740	0.71	-1.2
2,947,022	-		DZA65_RS13740	0.71	+0.2
2,947,022	-		DZA65_RS13740	0.71	+0.1
2,947,022	-		DZA65_RS13740	0.71	-1.8
2,947,022	-		DZA65_RS13740	0.71	-1.0
2,947,023	+		DZA65_RS13740	0.71	-1.2
2,947,023	+		DZA65_RS13740	0.71	-0.4
2,947,023	+		DZA65_RS13740	0.71	-0.1
2,947,023	+		DZA65_RS13740	0.71	+0.1
2,947,023	+		DZA65_RS13740	0.71	-1.5
2,947,023	+		DZA65_RS13740	0.71	-0.2
2,947,023	+		DZA65_RS13740	0.71	-0.5
2,947,023	+		DZA65_RS13740	0.71	-0.2
2,947,024	-		DZA65_RS13740	0.71	+0.5
2,947,024	-		DZA65_RS13740	0.71	-1.1
2,947,024	-		DZA65_RS13740	0.71	-0.6
2,947,024	-		DZA65_RS13740	0.71	-1.2
2,947,024	-		DZA65_RS13740	0.71	-0.4
2,947,024	-		DZA65_RS13740	0.71	-2.4
2,947,024	-		DZA65_RS13740	0.71	-1.2
2,947,055	+		DZA65_RS13740	0.74	-1.7
2,947,055	+		DZA65_RS13740	0.74	-0.2
2,947,055	+		DZA65_RS13740	0.74	-0.0
2,947,055	+		DZA65_RS13740	0.74	+0.5
2,947,056	-		DZA65_RS13740	0.74	-0.6
2,947,081	+		DZA65_RS13740	0.76	-0.7
2,947,081	+		DZA65_RS13740	0.76	-1.8
2,947,081	+		DZA65_RS13740	0.76	-0.4
2,947,081	+		DZA65_RS13740	0.76	-0.7
2,947,340	-				+0.2
2,947,380	+				-1.5
2,947,380	+				+0.1
2,947,380	+				+0.2
2,947,380	+				-0.9
2,947,381	-				-0.2
2,947,381	-				-1.2
2,947,397	-				-0.7
2,947,406	-				-0.9
2,947,407	+				+0.8
2,947,419	+				-0.5
2,947,419	+				-0.6
2,947,419	+				+0.2
2,947,419	+				+0.1
2,947,420	-				-0.0
2,947,420	-				+1.3
2,947,420	-				-1.2
2,947,420	-				-0.2
2,947,420	-				-1.0
2,947,474	+				+0.1
2,947,518	+				+0.1
2,947,518	+				+0.2
2,947,519	-				-1.4
2,947,519	-				-0.7
2,947,519	-				-1.2
2,947,519	-				-2.8
2,947,524	+				-0.2
2,947,597	+				+0.8
2,947,597	+				-0.1
2,947,598	-				-1.2
2,947,598	-				-0.1
2,947,598	-				+0.8
2,947,598	-				-1.4
2,947,600	+				+0.3
2,947,600	+				+0.7
2,947,600	+				-0.2
2,947,600	+				-0.4
2,947,600	+				-0.4
2,947,600	+				-1.6
2,947,601	-				+0.8
2,947,601	-				-0.3
2,947,601	-				+1.2
2,947,601	-				-0.2
2,947,601	-				-1.5
2,947,601	-				-0.3
2,947,601	-				-0.8
2,947,601	-				-1.5
2,947,601	-				+0.2
2,947,611	+				+0.2
2,947,651	+				-0.5
2,947,651	+				-0.8
2,947,651	+				-1.2
2,947,651	+				-0.6
2,947,652	-				+0.4
2,947,654	+				+0.8
2,947,654	+				-1.3
2,947,654	+				+1.4
2,947,654	+				-0.6
2,947,654	+				-0.7
2,947,654	+				+1.1
2,947,654	+				-1.2
2,947,654	+				-1.2
2,947,654	+				+0.1
2,947,655	-				-0.2
2,947,655	-				+0.2
2,947,655	-				-1.2
2,947,655	-				+0.6
2,947,655	-				-2.4
2,947,665	+		DZA65_RS13745	0.11	-0.0
2,947,665	+		DZA65_RS13745	0.11	-0.2
2,947,678	-		DZA65_RS13745	0.12	+1.8
2,947,678	-		DZA65_RS13745	0.12	-0.5
2,947,772	+		DZA65_RS13745	0.22	-0.2
2,947,772	+		DZA65_RS13745	0.22	-1.4
2,947,877	-		DZA65_RS13745	0.34	-1.9
2,947,901	+		DZA65_RS13745	0.36	+1.4
2,947,902	-		DZA65_RS13745	0.36	-0.0
2,947,910	+		DZA65_RS13745	0.37	+0.4
2,947,910	+		DZA65_RS13745	0.37	-0.9
2,947,911	-		DZA65_RS13745	0.37	+0.8
2,947,943	-		DZA65_RS13745	0.41	-0.8
2,947,943	-		DZA65_RS13745	0.41	+0.3
2,948,039	+		DZA65_RS13745	0.51	-0.8
2,948,040	-		DZA65_RS13745	0.51	+0.8
2,948,040	-		DZA65_RS13745	0.51	-0.1
2,948,040	-		DZA65_RS13745	0.51	+0.8
2,948,040	-		DZA65_RS13745	0.51	-1.5
2,948,111	-		DZA65_RS13745	0.59	-0.2
2,948,155	-		DZA65_RS13745	0.64	-1.0
2,948,172	+		DZA65_RS13745	0.66	+1.3
2,948,172	+		DZA65_RS13745	0.66	+0.1
2,948,172	+		DZA65_RS13745	0.66	-2.4
2,948,186	+		DZA65_RS13745	0.67	-2.5
2,948,241	+		DZA65_RS13745	0.73	+0.1
2,948,241	+		DZA65_RS13745	0.73	+1.1
2,948,241	+		DZA65_RS13745	0.73	-0.2
2,948,241	+		DZA65_RS13745	0.73	-0.2
2,948,241	+		DZA65_RS13745	0.73	+1.8
2,948,241	+		DZA65_RS13745	0.73	-0.6
2,948,241	+		DZA65_RS13745	0.73	+1.2
2,948,241	+		DZA65_RS13745	0.73	-0.7
2,948,241	+		DZA65_RS13745	0.73	-0.9
2,948,241	+		DZA65_RS13745	0.73	-1.3
2,948,242	-		DZA65_RS13745	0.73	-0.5
2,948,242	-		DZA65_RS13745	0.73	+0.4
2,948,242	-		DZA65_RS13745	0.73	-0.2
2,948,242	-		DZA65_RS13745	0.73	+2.8
2,948,242	-		DZA65_RS13745	0.73	+0.2
2,948,242	-		DZA65_RS13745	0.73	-1.2
2,948,243	+		DZA65_RS13745	0.74	-0.4
2,948,243	+		DZA65_RS13745	0.74	-2.7
2,948,243	+		DZA65_RS13745	0.74	-0.4
2,948,243	+		DZA65_RS13745	0.74	-0.6
2,948,243	+		DZA65_RS13745	0.74	-0.3
2,948,243	+		DZA65_RS13745	0.74	-0.6
2,948,243	+		DZA65_RS13745	0.74	+0.1
2,948,243	+		DZA65_RS13745	0.74	+0.3
2,948,244	-		DZA65_RS13745	0.74	-1.8
2,948,244	-		DZA65_RS13745	0.74	+0.8
2,948,244	-		DZA65_RS13745	0.74	-0.5
2,948,244	-		DZA65_RS13745	0.74	-1.8
2,948,244	-		DZA65_RS13745	0.74	-0.7
2,948,244	-		DZA65_RS13745	0.74	+0.2
2,948,244	-		DZA65_RS13745	0.74	+0.6
2,948,313	+		DZA65_RS13745	0.81	-1.6
2,948,325	-				-0.2
2,948,345	+		DZA65_RS13745	0.85	-0.2
2,948,427	+				+0.8
2,948,427	+				-1.8
2,948,427	+				-1.0
2,948,427	+				-0.5
2,948,427	+				+1.8
2,948,427	+				-1.5
2,948,427	+				-1.0
2,948,427	+				-1.5
2,948,428	-				-1.4
2,948,428	-				+0.5
2,948,428	-				-0.3
2,948,428	-				+2.2
2,948,428	-				+2.4
2,948,428	-				-2.2
2,948,428	-				+0.4
2,948,428	-				-0.7
2,948,429	+				+0.1
2,948,429	+				-1.9
2,948,429	+				-0.3
2,948,429	+				+0.1
2,948,429	+				-0.8
2,948,429	+				+0.8
2,948,429	+				-1.2
2,948,429	+				-0.6
2,948,429	+				-0.3
2,948,429	+				+0.5
2,948,429	+				-0.8
2,948,429	+				-1.4
2,948,429	+				-1.5
2,948,429	+				+0.2
2,948,429	+				-1.5
2,948,429	+				+1.4
2,948,429	+				-2.0
2,948,429	+				-1.1
2,948,429	+				-0.0
2,948,429	+				+0.8
2,948,429	+				-0.0
2,948,429	+				-0.5
2,948,429	+				-0.2
2,948,429	+				+0.1
2,948,430	-				-0.5
2,948,430	-				-1.0
2,948,430	-				+1.0
2,948,430	-				-0.3
2,948,430	-				+0.7
2,948,430	-				-0.2
2,948,430	-				+0.4
2,948,430	-				-0.5
2,948,430	-				+0.4
2,948,430	-				-0.5
2,948,430	-				+1.8
2,948,430	-				-0.9
2,948,430	-				-0.8
2,948,430	-				-0.8
2,948,430	-				-0.9
2,948,430	-				-0.0
2,948,430	-				-2.0
2,948,430	-				-0.2
2,948,430	-				-1.8
2,948,430	-				-0.8
2,948,430	-				-2.0
2,948,430	-				-1.2
2,948,481	+				-0.4
2,948,481	+				+1.5
2,948,482	-				-2.1
2,948,482	-				-0.6
2,948,482	-				+0.1
2,948,484	+				-0.2
2,948,484	+				-0.8
2,948,484	+				+1.0
2,948,484	+				-0.9
2,948,485	-				-2.4
2,948,485	-				+1.8
2,948,507	+				-1.2
2,948,507	+				-2.2
2,948,507	+				+3.6
2,948,508	-				+2.4
2,948,508	-				-2.4
2,948,508	-				-2.4
2,948,508	-				-0.5
2,948,517	+				-1.8
2,948,518	-				-1.7
2,948,518	-				-0.4
2,948,564	+				+0.5
2,948,565	-				+0.2
2,948,566	+				-0.5
2,948,566	+				-0.2
2,948,566	+				-0.6
2,948,566	+				-1.2
2,948,566	+				-1.8
2,948,566	+				+0.6
2,948,566	+				-1.1
2,948,566	+				+0.1
2,948,567	-				-0.2
2,948,567	-				-0.4
2,948,567	-				-1.4
2,948,567	-				-0.4
2,948,567	-				+0.4
2,948,567	-				-1.4
2,948,568	+				-0.2
2,948,568	+				-1.8
2,948,568	+				+0.3
2,948,568	+				-0.1
2,948,568	+				-1.2
2,948,569	-				-1.2
2,948,569	-				+0.1
2,948,569	-				+0.2
2,948,569	-				+0.2
2,948,569	-				+0.5
2,948,569	-				-1.0
2,948,569	-				-0.2
2,948,569	-				+0.5
2,948,597	+				-1.9
2,948,598	-				+0.1
2,948,598	-				+0.8
2,948,658	-				-0.3
2,948,658	-				+2.0
2,948,716	-				-0.6
2,948,716	-				-0.2
2,948,833	+				-1.9
2,948,954	-				-2.2
2,949,039	+		DZA65_RS13750	0.13	-0.4
2,949,039	+		DZA65_RS13750	0.13	-0.4
2,949,040	-		DZA65_RS13750	0.13	+2.4
2,949,109	+		DZA65_RS13750	0.15	-0.2
2,949,451	-		DZA65_RS13750	0.29	-1.5
2,949,451	-		DZA65_RS13750	0.29	+0.4