Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,750,997	+		DZA65_RS12835	0.11	-0.2
2,750,997	+		DZA65_RS12835	0.11	-0.2
2,750,998	-		DZA65_RS12835	0.11	-0.2
2,750,998	-		DZA65_RS12835	0.11	-0.1
2,750,998	-		DZA65_RS12835	0.11	+0.4
2,750,998	-		DZA65_RS12835	0.11	-0.6
2,750,998	-		DZA65_RS12835	0.11	+0.6
2,751,000	+		DZA65_RS12835	0.12	-1.6
2,751,000	+		DZA65_RS12835	0.12	+1.6
2,751,000	+				-0.8
2,751,051	+		DZA65_RS12835	0.22	-0.4
2,751,051	+		DZA65_RS12835	0.22	-1.1
2,751,052	-		DZA65_RS12835	0.22	-1.0
2,751,052	-		DZA65_RS12835	0.22	-2.2
2,751,052	-		DZA65_RS12835	0.22	-1.6
2,751,052	-		DZA65_RS12835	0.22	+0.5
2,751,097	-		DZA65_RS12835	0.31	-0.8
2,751,097	-		DZA65_RS12835	0.31	-0.2
2,751,137	+		DZA65_RS12835	0.39	-1.5
2,751,138	-		DZA65_RS12835	0.40	+0.2
2,751,155	+		DZA65_RS12835	0.43	-0.8
2,751,155	+		DZA65_RS12835	0.43	-0.8
2,751,155	+		DZA65_RS12835	0.43	-0.5
2,751,155	+		DZA65_RS12835	0.43	-0.7
2,751,156	-		DZA65_RS12835	0.43	-0.5
2,751,156	-		DZA65_RS12835	0.43	-1.6
2,751,156	-		DZA65_RS12835	0.43	-0.4
2,751,156	-		DZA65_RS12835	0.43	-1.8
2,751,156	-		DZA65_RS12835	0.43	-0.5
2,751,159	+		DZA65_RS12835	0.44	-0.4
2,751,159	+		DZA65_RS12835	0.44	+0.5
2,751,159	+		DZA65_RS12835	0.44	+1.1
2,751,160	-		DZA65_RS12835	0.44	-0.6
2,751,160	-		DZA65_RS12835	0.44	+1.1
2,751,160	-		DZA65_RS12835	0.44	-1.2
2,751,160	-		DZA65_RS12835	0.44	+0.8
2,751,160	-		DZA65_RS12835	0.44	+0.4
2,751,160	-		DZA65_RS12835	0.44	-1.1
2,751,198	+		DZA65_RS12835	0.52	-0.5
2,751,198	+		DZA65_RS12835	0.52	-2.1
2,751,227	+		DZA65_RS12835	0.57	-0.5
2,751,227	+		DZA65_RS12835	0.57	+0.2
2,751,227	+		DZA65_RS12835	0.57	+1.6
2,751,227	+		DZA65_RS12835	0.57	-0.2
2,751,227	+		DZA65_RS12835	0.57	-0.6
2,751,227	+		DZA65_RS12835	0.57	+0.8
2,751,227	+		DZA65_RS12835	0.57	+0.1
2,751,227	+		DZA65_RS12835	0.57	-0.5
2,751,227	+		DZA65_RS12835	0.57	+0.4
2,751,227	+		DZA65_RS12835	0.57	-1.6
2,751,227	+		DZA65_RS12835	0.57	-1.2
2,751,227	+		DZA65_RS12835	0.57	+0.3
2,751,227	+		DZA65_RS12835	0.57	-1.0
2,751,227	+		DZA65_RS12835	0.57	-0.4
2,751,227	+		DZA65_RS12835	0.57	-1.1
2,751,227	+		DZA65_RS12835	0.57	+0.4
2,751,227	+		DZA65_RS12835	0.57	-0.8
2,751,228	-		DZA65_RS12835	0.58	-0.1
2,751,228	-		DZA65_RS12835	0.58	+0.8
2,751,228	-		DZA65_RS12835	0.58	-0.6
2,751,228	-		DZA65_RS12835	0.58	-1.5
2,751,228	-		DZA65_RS12835	0.58	-2.3
2,751,228	-		DZA65_RS12835	0.58	+0.8
2,751,228	-		DZA65_RS12835	0.58	-0.8
2,751,228	-		DZA65_RS12835	0.58	+0.0
2,751,228	-		DZA65_RS12835	0.58	-2.6
2,751,228	-		DZA65_RS12835	0.58	-1.5
2,751,273	-		DZA65_RS12835	0.67	+1.8
2,751,273	-		DZA65_RS12835	0.67	-1.2
2,751,294	+		DZA65_RS12835	0.71	+2.8
2,751,295	-		DZA65_RS12835	0.71	-0.6
2,751,332	+		DZA65_RS12835	0.79	+0.1
2,751,332	+		DZA65_RS12835	0.79	+0.2
2,751,333	-		DZA65_RS12835	0.79	-1.2
2,751,335	+		DZA65_RS12835	0.79	+0.5
2,751,336	-		DZA65_RS12835	0.79	+0.2
2,751,351	+		DZA65_RS12835	0.82	+0.8
2,751,351	+		DZA65_RS12835	0.82	-1.2
2,751,351	+		DZA65_RS12835	0.82	+0.1
2,751,352	-		DZA65_RS12835	0.83	+0.8
2,751,352	-		DZA65_RS12835	0.83	+0.1
2,751,352	-		DZA65_RS12835	0.83	-0.2
2,751,352	-		DZA65_RS12835	0.83	+1.2
2,751,352	-		DZA65_RS12835	0.83	-0.8
2,751,352	-		DZA65_RS12835	0.83	+0.2
2,751,443	-				-0.5
2,751,551	+				+0.2
2,751,552	-				+0.1
2,751,552	-				-2.2
2,751,552	-				-0.5
2,751,601	+				-1.3
2,751,605	+				+0.3
2,751,605	+				-0.3
2,751,682	+				-0.9
2,751,683	-				+0.2
2,751,707	+				-0.2
2,751,707	+				+0.0
2,751,707	+				-1.8
2,751,708	-				+0.3
2,751,708	-				+0.0
2,751,708	-				-1.8
2,751,708	-				+0.2
2,751,709	+				+0.8
2,751,710	-				-1.0
2,751,710	-				-1.0
2,751,760	+				+0.2
2,751,763	+				+0.5
2,751,832	+				-0.1
2,751,856	-				-0.3
2,751,923	+				+0.2
2,751,923	+				-0.6
2,751,923	+				-0.2
2,751,952	-				-0.4
2,752,316	+				+0.4
2,752,316	+				+0.4
2,752,316	+				-0.6
2,752,317	-				-0.2
2,752,317	-				+0.4
2,752,395	+				-0.2
2,752,395	+				+0.3
2,752,395	+				-1.2
2,752,396	-				+1.4
2,752,470	+				+0.1
2,752,485	+				-0.8
2,752,486	-				-0.8
2,752,516	-				-2.0
2,752,516	-				-2.0
2,752,548	+				-0.6
2,752,548	+				-0.4
2,752,549	-				-0.3
2,752,549	-				-1.0
2,752,549	-				-0.8
2,752,626	+		DZA65_RS22920	0.13	-0.2
2,752,626	+		DZA65_RS22920	0.13	-1.8
2,752,626	+		DZA65_RS22920	0.13	-0.5
2,752,627	-		DZA65_RS22920	0.13	-0.8
2,752,627	-		DZA65_RS22920	0.13	-0.5
2,752,632	+		DZA65_RS22920	0.14	+0.5
2,752,632	+		DZA65_RS22920	0.14	-1.8
2,752,633	-		DZA65_RS22920	0.14	-0.5
2,752,659	+		DZA65_RS22920	0.16	+0.2
2,752,660	-		DZA65_RS22920	0.16	-1.5
2,752,669	-		DZA65_RS22920	0.16	+0.4
2,752,669	-		DZA65_RS22920	0.16	+0.2
2,752,669	-		DZA65_RS22920	0.16	-0.6
2,752,702	-		DZA65_RS22920	0.19	-0.4
2,752,702	-		DZA65_RS22920	0.19	-0.9
2,752,703	+		DZA65_RS22920	0.19	-0.2
2,752,703	+		DZA65_RS22920	0.19	-1.8
2,752,704	-		DZA65_RS22920	0.19	-0.1
2,752,709	-		DZA65_RS22920	0.19	+0.0
2,752,728	-				+0.8
2,752,813	-		DZA65_RS22920	0.26	-0.8
2,752,820	+		DZA65_RS22920	0.27	-2.2
2,752,820	+		DZA65_RS22920	0.27	-1.0
2,752,821	-		DZA65_RS22920	0.27	+0.8
2,752,827	+		DZA65_RS22920	0.27	+0.0
2,752,849	+		DZA65_RS22920	0.29	+0.8
2,752,850	-		DZA65_RS22920	0.29	-1.0
2,752,889	+		DZA65_RS22920	0.31	-0.3
2,752,889	+		DZA65_RS22920	0.31	-1.3
2,752,889	+		DZA65_RS22920	0.31	+0.0
2,752,889	+		DZA65_RS22920	0.31	+0.8
2,752,890	-		DZA65_RS22920	0.31	-1.2
2,752,890	-		DZA65_RS22920	0.31	-0.3
2,752,890	-		DZA65_RS22920	0.31	-1.0
2,752,899	+		DZA65_RS22920	0.32	+0.3
2,752,935	+		DZA65_RS22920	0.35	-0.6
2,752,935	+		DZA65_RS22920	0.35	-0.2
2,752,936	-		DZA65_RS22920	0.35	+0.1
2,752,957	+		DZA65_RS22920	0.36	-1.3
2,752,957	+		DZA65_RS22920	0.36	-2.9
2,752,958	-		DZA65_RS22920	0.36	-0.8
2,752,958	-		DZA65_RS22920	0.36	+0.6
2,752,958	-		DZA65_RS22920	0.36	+0.8
2,753,002	+		DZA65_RS22920	0.39	-0.6
2,753,003	-		DZA65_RS22920	0.39	-1.2
2,753,018	-		DZA65_RS22920	0.40	-1.2
2,753,076	+		DZA65_RS22920	0.44	+1.0
2,753,077	-		DZA65_RS22920	0.44	-0.9
2,753,077	-		DZA65_RS22920	0.44	-0.7
2,753,158	-		DZA65_RS22920	0.50	-0.9
2,753,178	-		DZA65_RS22920	0.51	+1.6