Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11525

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,461,644	+		DZA65_RS11510	0.66	-0.6
2,461,645	-		DZA65_RS11510	0.67	-0.6
2,461,753	+				-1.2
2,461,753	+				-0.0
2,461,753	+				+0.8
2,461,754	-				-1.1
2,461,754	-				-1.8
2,461,754	-				+0.8
2,461,807	-				-0.4
2,461,906	-				-0.4
2,461,918	+				-1.0
2,462,000	+				-0.4
2,462,342	+				+0.9
2,462,343	-				+0.4
2,462,525	-				-1.2
2,462,536	+				+1.0
2,462,537	-				-0.7
2,462,537	-				+1.8
2,462,537	-				-1.5
2,462,537	-				-0.2
2,462,537	-				-1.5
2,462,538	+				-1.0
2,462,538	+				+0.4
2,462,538	+				-0.4
2,462,538	+				-2.7
2,462,538	+				-2.2
2,462,538	+				-1.5
2,462,538	+				-0.5
2,462,538	+				+0.6
2,462,538	+				-0.8
2,462,538	+				-1.5
2,462,538	+				-1.2
2,462,538	+				+2.8
2,462,538	+				-1.2
2,462,538	+				+0.5
2,462,539	-				-0.8
2,462,539	-				+0.1
2,462,539	-				-1.2
2,462,539	-				+0.2
2,462,539	-				+0.1
2,462,539	-				+1.5
2,462,539	-				-1.0
2,462,539	-				-1.5
2,462,539	-				-0.2
2,462,539	-				-0.4
2,462,600	+		DZA65_RS11525	0.32	-1.0
2,462,600	+		DZA65_RS11525	0.32	+0.8
2,462,600	+		DZA65_RS11525	0.32	-1.8
2,462,601	-		DZA65_RS11525	0.32	-0.5
2,462,620	+		DZA65_RS11525	0.43	-1.7
2,462,621	-		DZA65_RS11525	0.43	-0.8
2,462,656	+		DZA65_RS11525	0.63	+0.3
2,462,656	+		DZA65_RS11525	0.63	-0.2
2,462,782	+				-0.6
2,462,783	-				-0.4
2,462,783	-				-1.5
2,462,891	+				-0.5
2,462,974	+				-0.2
2,463,032	+				+0.3
2,463,034	+				-0.3
2,463,035	-				+0.1
2,463,039	-				+0.8
2,463,079	+				-0.1
2,463,122	-				-0.5
2,463,125	-				-1.5
2,463,149	+				-2.4
2,463,150	-				+0.8
2,463,159	+				+0.2
2,463,161	+				-0.8
2,463,241	+		DZA65_RS11530	0.19	-1.2
2,463,271	-		DZA65_RS11530	0.24	-2.1
2,463,431	-		DZA65_RS11530	0.51	-0.8
2,463,431	-		DZA65_RS11530	0.51	-0.2
2,463,431	-		DZA65_RS11530	0.51	+2.0
2,463,443	-		DZA65_RS11530	0.53	+1.8