Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,291,471	+				-0.5
2,291,472	-				-1.5
2,291,472	-				-1.5
2,291,580	-				+0.8
2,291,580	-				-0.2
2,292,033	-				-2.5
2,292,126	+				-1.2
2,292,146	+				-1.6
2,292,229	+				-1.0
2,292,229	+				-3.2
2,292,229	+				-1.9
2,292,230	-				-0.6
2,292,233	+				-1.6
2,292,233	+				+0.5
2,292,233	+				-0.3
2,292,234	-				-2.8
2,292,234	-				-1.5
2,292,239	-				-2.7
2,292,269	+				-0.9
2,292,310	+				-1.0
2,292,314	+				+0.1
2,292,315	-				-1.6
2,292,315	-				-1.3
2,292,315	-				-1.7
2,292,384	-				-0.5
2,292,384	-				-1.5
2,292,440	+		DZA65_RS10840	0.12	-0.9
2,292,442	+		DZA65_RS10840	0.12	-1.0
2,292,442	+		DZA65_RS10840	0.12	-2.2
2,292,442	+		DZA65_RS10840	0.12	-1.3
2,292,443	-		DZA65_RS10840	0.12	-2.1
2,292,443	-		DZA65_RS10840	0.12	-3.2
2,292,443	-		DZA65_RS10840	0.12	-1.7
2,292,443	-		DZA65_RS10840	0.12	-0.6
2,292,489	+		DZA65_RS10840	0.20	-1.6
2,292,489	+		DZA65_RS10840	0.20	+0.4
2,292,489	+		DZA65_RS10840	0.20	-1.5
2,292,490	-		DZA65_RS10840	0.20	-0.9
2,292,520	+		DZA65_RS10840	0.25	-1.2
2,292,577	-		DZA65_RS10840	0.34	-0.5
2,292,613	+		DZA65_RS10840	0.40	+0.2
2,292,628	-		DZA65_RS10840	0.43	-0.8
2,292,693	+		DZA65_RS10840	0.54	+0.8
2,292,693	+		DZA65_RS10840	0.54	-2.2
2,292,693	+		DZA65_RS10840	0.54	-1.2
2,292,694	-		DZA65_RS10840	0.54	-0.2
2,292,762	-		DZA65_RS10840	0.65	-1.6
2,292,796	+		DZA65_RS10840	0.71	-0.8
2,292,821	-		DZA65_RS10840	0.75	-1.2
2,292,835	-		DZA65_RS10840	0.77	-1.6
2,292,835	-		DZA65_RS10840	0.77	-0.5
2,292,905	+		DZA65_RS10840	0.89	-1.0
2,292,906	-		DZA65_RS10840	0.89	+0.1
2,292,906	-		DZA65_RS10840	0.89	-1.2
2,292,910	-		DZA65_RS10840	0.90	-0.2
2,292,929	+				-1.2
2,292,932	-				-0.2
2,292,969	-				-2.0
2,292,973	+				-0.2
2,292,974	-				-1.4
2,292,976	-				+0.2
2,292,977	+				-1.3
2,292,977	+				-2.0
2,292,978	-				-0.5
2,292,978	-				-1.0
2,292,978	-				+0.8
2,292,987	-				+0.3
2,293,083	-				-0.8
2,293,101	+				-1.5
2,293,101	+				+0.2
2,293,101	+				-1.4
2,293,102	-				-1.9
2,293,102	-				-0.9
2,293,102	-				-0.1
2,293,109	+				-0.0
2,293,109	+				-0.2
2,293,109	+				-0.1
2,293,110	-				+1.8
2,293,130	-				-0.6
2,293,130	-				-1.0
2,293,165	+				-1.5
2,293,167	+				-1.4
2,293,167	+				-0.8
2,293,167	+				-0.2
2,293,167	+				-0.6
2,293,167	+				+1.4
2,293,167	+				-2.4
2,293,167	+				-0.8
2,293,168	-				+1.5
2,293,168	-				-0.9
2,293,168	-				-0.5
2,293,168	-				-2.9
2,293,169	+				-0.9
2,293,169	+				-1.2
2,293,169	+				-0.2
2,293,170	-				-1.0
2,293,170	-				-2.4
2,293,170	-				-2.4
2,293,170	-				-0.6
2,293,170	-				-0.5
2,293,170	-				+0.8
2,293,170	-				+1.4
2,293,170	-				-0.2
2,293,170	-				-2.2
2,293,171	+				+0.8
2,293,171	+				-0.8
2,293,171	+				-0.2
2,293,172	-				-0.1
2,293,172	-				-0.6
2,293,172	-				+0.6
2,293,172	-				-0.2
2,293,172	-				-1.0
2,293,172	-				-1.1
2,293,176	+				+1.2
2,293,176	+				+1.2
2,293,176	+				-0.8
2,293,177	-				-0.8
2,293,177	-				-0.5
2,293,180	+				-0.8
2,293,180	+				-0.2
2,293,180	+				+0.8
2,293,185	-				-0.8
2,293,195	-				-2.0
2,293,197	+				-0.3
2,293,198	-				-0.6
2,293,198	-				-0.8
2,293,258	+				-0.5
2,293,270	-				+0.0
2,293,274	+				-0.2
2,293,275	-				-0.2
2,293,278	+				-0.2
2,293,344	+				-1.5
2,293,345	-				-0.5
2,293,366	+				-0.8
2,293,426	-				+0.2
2,293,428	+				-0.6
2,293,428	+				-0.5
2,293,428	+				-2.6
2,293,428	+				-0.2
2,293,429	-				-2.6
2,293,429	-				+0.2
2,293,429	-				-0.3
2,293,435	-				-1.4
2,293,435	-				-0.2
2,293,435	-				-1.2
2,293,438	-				-0.4
2,293,438	-				+0.2
2,293,486	+				+0.1
2,293,487	-				+0.8
2,293,487	-				-0.6
2,293,501	+				-2.4
2,293,502	-				-1.3
2,293,502	-				-2.2
2,293,502	-				-0.9
2,293,502	-				-1.8
2,293,502	-				+0.1
2,293,534	-				-0.9
2,293,614	-				+1.8
2,293,693	-				-0.8
2,293,730	+				-1.5
2,293,731	-				+0.5
2,293,731	-				-0.2
2,293,731	-				-0.5
2,293,794	+				-2.0
2,293,795	-				+0.8
2,293,858	+				-2.4
2,293,858	+				+0.4
2,293,875	+				-0.9
2,293,875	+				+1.0
2,293,876	-				+0.8
2,293,876	-				-1.0