Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08655

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,831,304	+				-0.1
1,831,304	+				-0.7
1,831,305	-				-1.6
1,831,306	+				+0.2
1,831,306	+				-0.7
1,831,306	+				-0.5
1,831,306	+				-0.4
1,831,307	-				-0.9
1,831,307	-				-0.8
1,831,307	-				-0.7
1,831,307	-				-2.8
1,831,307	-				-2.1
1,831,307	-				-0.4
1,831,309	+				+0.9
1,831,310	-				-1.3
1,831,310	-				-0.4
1,831,310	-				-1.0
1,831,338	-				+0.3
1,831,354	+				-0.1
1,831,354	+				-0.4
1,831,354	+				-0.1
1,831,354	+				+0.3
1,831,354	+				-1.1
1,831,355	-				-0.4
1,831,355	-				-1.4
1,831,364	+				-0.6
1,831,364	+				+0.5
1,831,365	-				-0.1
1,831,365	-				-0.8
1,831,365	-				-0.7
1,831,365	-				-1.5
1,831,376	-				+0.3
1,831,596	+		DZA65_RS08650	0.29	+0.2
1,831,596	+		DZA65_RS08650	0.29	-1.1
1,831,596	+		DZA65_RS08650	0.29	-1.0
1,831,647	-		DZA65_RS08650	0.35	+0.9
1,831,647	-		DZA65_RS08650	0.35	-1.4
1,831,689	+		DZA65_RS08650	0.41	+2.7
1,831,689	+		DZA65_RS08650	0.41	-2.3
1,831,689	+		DZA65_RS08650	0.41	-1.0
1,831,689	+		DZA65_RS08650	0.41	-0.9
1,831,690	-		DZA65_RS08650	0.41	+0.9
1,831,690	-		DZA65_RS08650	0.41	-0.3
1,831,690	-		DZA65_RS08650	0.41	-0.1
1,831,690	-		DZA65_RS08650	0.41	-0.5
1,831,690	-		DZA65_RS08650	0.41	+1.5
1,831,706	-		DZA65_RS08650	0.43	-0.5
1,831,730	+		DZA65_RS08650	0.46	-0.7
1,831,730	+		DZA65_RS08650	0.46	-0.1
1,831,730	+		DZA65_RS08650	0.46	+0.0
1,831,730	+		DZA65_RS08650	0.46	-0.4
1,831,730	+		DZA65_RS08650	0.46	-0.6
1,831,731	-		DZA65_RS08650	0.46	-1.9
1,831,731	-		DZA65_RS08650	0.46	-0.8
1,831,731	-		DZA65_RS08650	0.46	-1.4
1,831,731	-		DZA65_RS08650	0.46	-0.6
1,831,731	-		DZA65_RS08650	0.46	+0.3
1,831,731	-		DZA65_RS08650	0.46	-1.7
1,831,733	+		DZA65_RS08650	0.47	+1.3
1,831,733	+		DZA65_RS08650	0.47	-1.7
1,831,733	+		DZA65_RS08650	0.47	-1.7
1,831,734	-		DZA65_RS08650	0.47	-1.3
1,831,734	-		DZA65_RS08650	0.47	-0.2
1,831,734	-		DZA65_RS08650	0.47	-1.9
1,831,796	+		DZA65_RS08650	0.55	-1.1
1,831,828	+		DZA65_RS08650	0.59	-0.3
1,831,828	+		DZA65_RS08650	0.59	-1.0
1,831,828	+		DZA65_RS08650	0.59	-1.4
1,831,828	+		DZA65_RS08650	0.59	-0.1
1,831,828	+		DZA65_RS08650	0.59	-1.7
1,831,828	+		DZA65_RS08650	0.59	+0.6
1,831,829	-		DZA65_RS08650	0.59	-0.1
1,831,829	-		DZA65_RS08650	0.59	+0.9
1,831,829	-		DZA65_RS08650	0.59	-0.7
1,831,967	+				-0.1
1,831,967	+		DZA65_RS08650	0.77	-1.7
1,831,968	-		DZA65_RS08650	0.77	-0.1
1,831,968	-		DZA65_RS08650	0.77	-2.4
1,832,138	+				-0.1
1,832,138	+				-0.1
1,832,139	-				-0.7
1,832,139	-				+0.0
1,832,139	-				-1.6
1,832,139	-				-1.4
1,832,139	-				+2.5
1,832,139	-				-2.4
1,832,139	-				-0.3
1,832,148	+				-0.1
1,832,148	+				+1.9
1,832,205	+				+0.5
1,832,205	+				-0.1
1,832,206	-				-0.7
1,832,246	+				-0.5
1,832,246	+				+0.5
1,832,247	-				-2.1
1,832,247	-				+0.4
1,832,318	+				-0.8
1,832,318	+				-0.7
1,832,319	-				-0.8
1,832,327	-				-1.1
1,832,504	+		DZA65_RS08655	0.29	+0.7
1,832,603	-				-0.7
1,832,680	+		DZA65_RS08655	0.54	-0.8
1,832,680	+		DZA65_RS08655	0.54	-2.1
1,832,680	+		DZA65_RS08655	0.54	+0.5
1,832,680	+		DZA65_RS08655	0.54	+0.2
1,832,681	-		DZA65_RS08655	0.54	-0.7
1,832,681	-		DZA65_RS08655	0.54	-0.3
1,832,681	-		DZA65_RS08655	0.54	-1.7
1,832,681	-		DZA65_RS08655	0.54	-0.2
1,832,790	+		DZA65_RS08655	0.70	+0.5
1,832,808	+		DZA65_RS08655	0.72	+0.2
1,832,877	+		DZA65_RS08655	0.82	-1.4
1,832,877	+		DZA65_RS08655	0.82	+0.0
1,832,877	+		DZA65_RS08655	0.82	-1.3
1,832,878	-		DZA65_RS08655	0.82	+0.9
1,833,000	+				-1.3
1,833,001	-				+0.4
1,833,204	+		DZA65_RS08660	0.14	-2.4
1,833,205	-		DZA65_RS08660	0.14	+0.3
1,833,205	-		DZA65_RS08660	0.14	+0.9
1,833,247	+		DZA65_RS08660	0.17	-0.4
1,833,248	-		DZA65_RS08660	0.17	+0.3
1,833,248	-		DZA65_RS08660	0.17	-0.5
1,833,417	+		DZA65_RS08660	0.29	+1.9
1,833,417	+		DZA65_RS08660	0.29	+0.9
1,833,767	-		DZA65_RS08660	0.54	-1.1
1,833,808	+		DZA65_RS08660	0.57	-0.3
1,833,808	+		DZA65_RS08660	0.57	-1.4
1,833,809	-		DZA65_RS08660	0.57	-0.8
1,833,809	-		DZA65_RS08660	0.57	-0.4
1,833,865	+		DZA65_RS08660	0.61	-1.4
1,833,866	-		DZA65_RS08660	0.61	+0.3
1,833,903	+		DZA65_RS08660	0.63	-2.1