Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS06710 and DZA65_RS06715 are separated by 75 nucleotides DZA65_RS06715 and DZA65_RS06720 are separated by 344 nucleotides
DZA65_RS06710: DZA65_RS06710 - glutamine--tRNA ligase, at 1,391,424 to 1,393,082
_RS06710
DZA65_RS06715: DZA65_RS06715 - ferric iron uptake transcriptional regulator, at 1,393,158 to 1,393,604
_RS06715
DZA65_RS06720: DZA65_RS06720 - flavodoxin FldA, at 1,393,949 to 1,394,476
_RS06720
Position (kb)
1393
1394 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1393.223 kb on - strand, within DZA65_RS06715 at 1393.651 kb on - strand at 1393.651 kb on - strand at 1393.654 kb on - strand at 1393.692 kb on + strand at 1393.694 kb on + strand at 1393.694 kb on + strand at 1393.694 kb on + strand at 1393.694 kb on + strand at 1393.695 kb on - strand at 1393.695 kb on - strand at 1393.695 kb on - strand at 1393.695 kb on - strand at 1393.695 kb on - strand at 1393.732 kb on - strand at 1393.759 kb on - strand at 1393.815 kb on + strand at 1393.816 kb on - strand at 1393.816 kb on - strand at 1393.816 kb on - strand at 1393.836 kb on + strand at 1393.841 kb on + strand at 1393.841 kb on + strand at 1393.842 kb on - strand at 1393.842 kb on - strand at 1393.895 kb on - strand at 1393.898 kb on + strand at 1393.898 kb on + strand at 1393.898 kb on + strand at 1393.898 kb on + strand at 1393.899 kb on - strand at 1393.899 kb on - strand at 1393.899 kb on - strand at 1393.899 kb on - strand at 1393.899 kb on - strand at 1393.904 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.906 kb on + strand at 1393.907 kb on - strand at 1393.907 kb on - strand at 1393.910 kb on + strand at 1393.910 kb on + strand at 1393.910 kb on + strand at 1393.910 kb on + strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1393.911 kb on - strand at 1394.541 kb on - strand at 1394.569 kb on + strand at 1394.569 kb on + strand at 1394.569 kb on + strand at 1394.570 kb on - strand at 1394.597 kb on - strand at 1394.597 kb on - strand at 1394.597 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,393,223 - DZA65_RS06715 0.15 -0.6 1,393,651 - -0.9 1,393,651 - -0.6 1,393,654 - -0.4 1,393,692 + +0.5 1,393,694 + -0.1 1,393,694 + -0.3 1,393,694 + +1.3 1,393,694 + +1.5 1,393,695 - +0.7 1,393,695 - -0.1 1,393,695 - +0.2 1,393,695 - +0.4 1,393,695 - +0.2 1,393,732 - -1.4 1,393,759 - -1.6 1,393,815 + +0.9 1,393,816 - -1.9 1,393,816 - -0.3 1,393,816 - +0.9 1,393,836 + +0.4 1,393,841 + -0.5 1,393,841 + +0.6 1,393,842 - +1.4 1,393,842 - +0.9 1,393,895 - -0.8 1,393,898 + +2.9 1,393,898 + -0.8 1,393,898 + -0.1 1,393,898 + +0.4 1,393,899 - +0.9 1,393,899 - +0.2 1,393,899 - -0.2 1,393,899 - -0.4 1,393,899 - +0.4 1,393,904 + -1.1 1,393,906 + -0.3 1,393,906 + -0.2 1,393,906 + -0.2 1,393,906 + -2.9 1,393,906 + -2.2 1,393,906 + +0.0 1,393,906 + -0.1 1,393,906 + -0.3 1,393,906 + +0.9 1,393,906 + -0.3 1,393,907 - -0.6 1,393,907 - +0.2 1,393,910 + -2.1 1,393,910 + -0.4 1,393,910 + +0.1 1,393,910 + +0.6 1,393,911 - -1.4 1,393,911 - -1.6 1,393,911 - +1.2 1,393,911 - -0.5 1,393,911 - +0.4 1,393,911 - -0.6 1,393,911 - -0.2 1,393,911 - -0.0 1,393,911 - +0.6 1,394,541 - -0.6 1,394,569 + -0.1 1,394,569 + +1.5 1,394,569 + -0.6 1,394,570 - -1.9 1,394,597 - -0.9 1,394,597 - -0.8 1,394,597 - +0.4
Or see this region's nucleotide sequence