Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05305

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,091,849	+		DZA65_RS05300	0.64	+0.2
1,091,849	+		DZA65_RS05300	0.64	-0.4
1,091,849	+		DZA65_RS05300	0.64	-0.2
1,091,849	+		DZA65_RS05300	0.64	-1.6
1,091,850	-		DZA65_RS05300	0.64	-0.4
1,091,850	-		DZA65_RS05300	0.64	-0.7
1,091,850	-		DZA65_RS05300	0.64	-0.9
1,092,067	-		DZA65_RS05300	0.74	-0.8
1,092,067	-		DZA65_RS05300	0.74	-1.0
1,092,184	+		DZA65_RS05300	0.79	-1.6
1,092,184	+		DZA65_RS05300	0.79	-0.8
1,092,184	+		DZA65_RS05300	0.79	-0.5
1,092,184	+		DZA65_RS05300	0.79	+0.3
1,092,185	-		DZA65_RS05300	0.79	-1.5
1,092,185	-		DZA65_RS05300	0.79	+0.2
1,092,276	-		DZA65_RS05300	0.83	-0.4
1,092,295	+		DZA65_RS05300	0.84	-0.8
1,092,295	+		DZA65_RS05300	0.84	-1.8
1,092,295	+		DZA65_RS05300	0.84	-1.1
1,092,295	+		DZA65_RS05300	0.84	-0.9
1,092,296	-		DZA65_RS05300	0.84	+1.6
1,092,298	+		DZA65_RS05300	0.84	+1.6
1,092,298	+		DZA65_RS05300	0.84	-0.8
1,092,299	-		DZA65_RS05300	0.84	-1.0
1,092,299	-		DZA65_RS05300	0.84	+0.2
1,092,299	-		DZA65_RS05300	0.84	-1.8
1,092,318	+		DZA65_RS05300	0.85	+1.0
1,092,319	-		DZA65_RS05300	0.85	+1.0
1,092,320	+		DZA65_RS05300	0.85	-0.8
1,092,320	+		DZA65_RS05300	0.85	-0.3
1,092,320	+		DZA65_RS05300	0.85	-0.0
1,092,320	+		DZA65_RS05300	0.85	-0.0
1,092,320	+		DZA65_RS05300	0.85	-0.4
1,092,320	+		DZA65_RS05300	0.85	-0.4
1,092,321	-		DZA65_RS05300	0.85	+0.8
1,092,321	-		DZA65_RS05300	0.85	+0.2
1,092,321	-		DZA65_RS05300	0.85	-1.4
1,092,321	-		DZA65_RS05300	0.85	-0.3
1,092,321	-		DZA65_RS05300	0.85	+0.4
1,092,363	+		DZA65_RS05300	0.87	-0.0
1,092,363	+		DZA65_RS05300	0.87	-0.6
1,092,363	+		DZA65_RS05300	0.87	-0.8
1,092,363	+		DZA65_RS05300	0.87	-0.7
1,092,363	+		DZA65_RS05300	0.87	+0.6
1,092,363	+		DZA65_RS05300	0.87	+2.0
1,092,363	+		DZA65_RS05300	0.87	-0.8
1,092,363	+		DZA65_RS05300	0.87	-1.6
1,092,364	-		DZA65_RS05300	0.87	-0.6
1,092,364	-		DZA65_RS05300	0.87	-1.6
1,092,364	-		DZA65_RS05300	0.87	-1.4
1,092,364	-		DZA65_RS05300	0.87	+1.0
1,092,364	-		DZA65_RS05300	0.87	-1.4
1,092,367	+		DZA65_RS05300	0.87	-1.4
1,092,367	+		DZA65_RS05300	0.87	-0.3
1,092,367	+		DZA65_RS05300	0.87	-0.4
1,092,367	+		DZA65_RS05300	0.87	-0.6
1,092,367	+		DZA65_RS05300	0.87	-0.0
1,092,368	-		DZA65_RS05300	0.87	-0.8
1,092,368	-		DZA65_RS05300	0.87	-1.8
1,092,368	-		DZA65_RS05300	0.87	-0.3
1,092,383	+		DZA65_RS05300	0.88	-1.2
1,092,383	+		DZA65_RS05300	0.88	+0.1
1,092,384	-		DZA65_RS05300	0.88	-1.0
1,092,503	+				-0.0
1,092,503	+				-2.4
1,092,503	+				-0.4
1,092,503	+				-2.0
1,092,696	+				-0.4
1,092,696	+				-1.1
1,092,696	+				-0.4
1,092,696	+				+1.2
1,092,707	+				-1.3
1,092,738	+				+0.6
1,092,743	+				-0.8
1,092,743	+				-2.0
1,092,743	+				-0.3
1,092,743	+				+0.0
1,092,743	+				-2.0
1,092,743	+				+1.0
1,092,796	+				+1.0
1,092,800	+				+0.2
1,093,721	+				-0.8
1,093,722	-				-2.0
1,093,725	+				-1.6
1,093,725	+				-0.0
1,093,726	-				-1.6
1,093,726	-				-0.0
1,093,726	-				-0.6
1,093,726	-				-2.6
1,093,726	-				-0.8
1,093,747	+				-0.6
1,093,748	-				-1.6
1,094,063	+		DZA65_RS05310	0.41	+0.4
1,094,063	+		DZA65_RS05310	0.41	+0.2
1,094,064	-		DZA65_RS05310	0.41	-0.3
1,094,064	-		DZA65_RS05310	0.41	-1.6
1,094,064	-		DZA65_RS05310	0.41	-0.2
1,094,194	+		DZA65_RS05310	0.57	+0.1
1,094,194	+		DZA65_RS05310	0.57	-2.4
1,094,194	+		DZA65_RS05310	0.57	-0.3
1,094,195	-		DZA65_RS05310	0.57	+0.6
1,094,195	-		DZA65_RS05310	0.57	+1.0
1,094,227	+		DZA65_RS05310	0.62	-1.5
1,094,228	-		DZA65_RS05310	0.62	-0.8
1,094,228	-		DZA65_RS05310	0.62	+0.2
1,094,278	+		DZA65_RS05310	0.68	-0.8
1,094,279	-		DZA65_RS05310	0.68	-0.9
1,094,279	-		DZA65_RS05310	0.68	-0.0
1,094,295	+		DZA65_RS05310	0.70	-0.6
1,094,295	+		DZA65_RS05310	0.70	-1.4
1,094,295	+		DZA65_RS05310	0.70	-0.6
1,094,295	+		DZA65_RS05310	0.70	-1.0
1,094,295	+		DZA65_RS05310	0.70	-0.2
1,094,296	-		DZA65_RS05310	0.70	-1.6
1,094,296	-		DZA65_RS05310	0.70	-0.8
1,094,296	-		DZA65_RS05310	0.70	-0.9
1,094,296	-		DZA65_RS05310	0.70	+0.1
1,094,296	-		DZA65_RS05310	0.70	-0.0
1,094,296	-				-1.4
1,094,296	-		DZA65_RS05310	0.70	-0.4
1,094,296	-		DZA65_RS05310	0.70	-0.3
1,094,296	-		DZA65_RS05310	0.70	-1.0
1,094,362	+		DZA65_RS05310	0.78	+1.0
1,094,362	+		DZA65_RS05310	0.78	-0.4
1,094,462	-				-0.0
1,094,484	-				-0.6
1,094,530	+				-0.4
1,094,531	-				-1.3
1,094,531	-				-1.2
1,094,551	-				-0.7
1,094,551	-				-0.8
1,094,588	+				-0.1
1,094,588	+				-2.2
1,094,589	-				-0.6
1,094,589	-				-0.6
1,094,589	-				+0.3
1,094,643	+				+0.7
1,094,643	+				+0.6
1,094,643	+				-0.5
1,094,644	-				-1.4
1,094,644	-				-1.8
1,094,644	-				-0.1
1,094,644	-				-0.6