Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS04240 and DZA65_RS04250 are separated by 172 nucleotides DZA65_RS04250 and DZA65_RS04255 are separated by 477 nucleotides
DZA65_RS04240: DZA65_RS04240 - NAD(+) kinase, at 884,871 to 885,749
_RS04240
DZA65_RS04250: DZA65_RS04250 - nucleotide exchange factor GrpE, at 885,922 to 886,509
_RS04250
DZA65_RS04255: DZA65_RS04255 - divalent metal cation transporter, at 886,987 to 888,222
_RS04255
Position (kb) 885
886
887 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.761 kb on - strand at 885.817 kb on + strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.818 kb on - strand at 885.876 kb on + strand at 885.888 kb on + strand at 886.507 kb on + strand at 886.508 kb on - strand at 886.508 kb on - strand at 886.508 kb on - strand at 886.614 kb on - strand at 886.631 kb on + strand at 886.632 kb on - strand at 886.632 kb on - strand at 886.632 kb on - strand at 886.632 kb on - strand at 886.691 kb on + strand at 886.692 kb on - strand at 886.692 kb on - strand at 886.695 kb on + strand at 886.695 kb on + strand at 886.695 kb on + strand at 886.696 kb on - strand at 886.696 kb on - strand at 886.696 kb on - strand at 886.696 kb on - strand at 886.696 kb on - strand at 886.696 kb on - strand at 886.709 kb on + strand at 886.709 kb on + strand at 886.710 kb on - strand at 886.713 kb on + strand at 886.714 kb on - strand at 886.721 kb on + strand at 886.722 kb on - strand at 886.764 kb on + strand at 886.764 kb on + strand at 886.765 kb on - strand at 886.768 kb on + strand at 886.806 kb on + strand at 886.806 kb on + strand at 886.811 kb on + strand at 886.811 kb on + strand at 886.816 kb on + strand at 886.816 kb on + strand at 886.816 kb on + strand at 886.816 kb on + strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.817 kb on - strand at 886.879 kb on + strand at 886.879 kb on + strand at 886.879 kb on + strand at 886.880 kb on - strand at 886.880 kb on - strand at 886.882 kb on + strand at 886.883 kb on - strand at 886.883 kb on - strand at 886.883 kb on - strand at 886.883 kb on - strand at 886.883 kb on - strand at 886.898 kb on + strand at 886.898 kb on + strand at 886.902 kb on - strand at 886.920 kb on + strand at 886.921 kb on - strand at 886.921 kb on - strand at 886.937 kb on - strand at 886.937 kb on - strand at 886.939 kb on + strand at 886.971 kb on + strand at 886.971 kb on + strand at 886.971 kb on + strand at 886.972 kb on - strand at 886.972 kb on - strand at 886.972 kb on - strand at 886.986 kb on + strand at 886.986 kb on + strand at 886.987 kb on - strand at 887.003 kb on + strand at 887.003 kb on + strand at 887.003 kb on + strand at 887.004 kb on - strand at 887.004 kb on - strand at 887.004 kb on - strand at 887.022 kb on + strand at 887.023 kb on - strand at 887.023 kb on - strand at 887.064 kb on + strand at 887.080 kb on + strand at 887.081 kb on - strand at 887.082 kb on + strand at 887.082 kb on + strand at 887.082 kb on + strand at 887.083 kb on - strand at 887.083 kb on - strand at 887.083 kb on - strand at 887.083 kb on - strand at 887.083 kb on - strand at 887.109 kb on + strand at 887.128 kb on + strand, within DZA65_RS04255 at 887.129 kb on - strand, within DZA65_RS04255 at 887.189 kb on + strand, within DZA65_RS04255 at 887.189 kb on + strand, within DZA65_RS04255 at 887.189 kb on + strand, within DZA65_RS04255 at 887.189 kb on + strand at 887.190 kb on - strand, within DZA65_RS04255 at 887.190 kb on - strand, within DZA65_RS04255 at 887.190 kb on - strand, within DZA65_RS04255 at 887.190 kb on - strand, within DZA65_RS04255 at 887.238 kb on + strand, within DZA65_RS04255 at 887.238 kb on + strand, within DZA65_RS04255 at 887.239 kb on - strand, within DZA65_RS04255 at 887.346 kb on + strand, within DZA65_RS04255 at 887.347 kb on - strand, within DZA65_RS04255 at 887.347 kb on - strand, within DZA65_RS04255 at 887.347 kb on - strand, within DZA65_RS04255 at 887.351 kb on + strand, within DZA65_RS04255 at 887.351 kb on + strand, within DZA65_RS04255 at 887.351 kb on + strand, within DZA65_RS04255 at 887.351 kb on + strand, within DZA65_RS04255 at 887.351 kb on + strand, within DZA65_RS04255 at 887.352 kb on - strand, within DZA65_RS04255 at 887.400 kb on + strand, within DZA65_RS04255 at 887.400 kb on + strand, within DZA65_RS04255 at 887.400 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.488 kb on + strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.489 kb on - strand, within DZA65_RS04255 at 887.490 kb on + strand, within DZA65_RS04255 at 887.490 kb on + strand, within DZA65_RS04255 at 887.490 kb on + strand, within DZA65_RS04255 at 887.490 kb on + strand, within DZA65_RS04255 at 887.490 kb on + strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255 at 887.491 kb on - strand, within DZA65_RS04255
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 885,761 - -1.0 885,761 - +1.0 885,761 - +0.1 885,761 - -0.6 885,761 - -0.6 885,761 - -0.3 885,761 - -2.0 885,761 - -0.4 885,761 - -1.0 885,761 - +0.0 885,817 + -1.2 885,818 - -0.6 885,818 - +0.1 885,818 - -0.3 885,818 - -1.8 885,818 - +0.4 885,818 - -0.3 885,818 - +0.5 885,818 - -1.7 885,818 - -0.7 885,876 + +0.2 885,888 + -0.6 886,507 + -0.7 886,508 - -0.6 886,508 - -1.8 886,508 - +0.3 886,614 - +0.0 886,631 + +1.0 886,632 - -0.4 886,632 - +1.0 886,632 - -1.3 886,632 - -0.5 886,691 + +2.3 886,692 - +2.0 886,692 - -1.5 886,695 + -2.3 886,695 + +0.7 886,695 + -0.5 886,696 - -0.2 886,696 - -0.7 886,696 - +0.1 886,696 - -1.1 886,696 - -2.5 886,696 - -0.8 886,709 + -1.3 886,709 + -0.5 886,710 - +0.2 886,713 + -0.9 886,714 - -0.6 886,721 + +0.3 886,722 - -0.8 886,764 + -0.6 886,764 + -1.3 886,765 - -1.0 886,768 + +1.0 886,806 + +0.3 886,806 + -0.6 886,811 + -1.3 886,811 + -0.2 886,816 + -1.6 886,816 + -2.3 886,816 + +0.8 886,816 + -0.5 886,817 - -0.6 886,817 - +0.8 886,817 - -0.2 886,817 - -0.5 886,817 - -0.7 886,817 - +0.2 886,817 - -1.3 886,817 - -0.7 886,879 + +0.0 886,879 + -0.6 886,879 + -0.1 886,880 - -2.6 886,880 - +0.6 886,882 + -0.2 886,883 - +0.3 886,883 - -1.2 886,883 - -1.3 886,883 - +0.3 886,883 - +0.6 886,898 + +0.6 886,898 + -0.2 886,902 - +0.4 886,920 + +1.0 886,921 - -0.8 886,921 - -1.0 886,937 - -0.6 886,937 - +0.0 886,939 + -1.3 886,971 + -0.8 886,971 + -0.3 886,971 + +0.5 886,972 - -0.6 886,972 - -1.0 886,972 - +1.0 886,986 + -1.6 886,986 + -1.1 886,987 - -0.2 887,003 + +1.4 887,003 + +2.2 887,003 + -1.2 887,004 - +0.5 887,004 - -0.8 887,004 - -0.3 887,022 + +0.1 887,023 - -1.6 887,023 - +0.3 887,064 + -0.9 887,080 + -0.6 887,081 - +0.0 887,082 + -1.6 887,082 + -0.6 887,082 + +0.3 887,083 - -3.2 887,083 - +1.0 887,083 - -0.2 887,083 - +0.7 887,083 - +1.6 887,109 + -1.3 887,128 + DZA65_RS04255 0.11 -0.2 887,129 - DZA65_RS04255 0.11 -0.7 887,189 + DZA65_RS04255 0.16 -0.3 887,189 + DZA65_RS04255 0.16 +1.0 887,189 + DZA65_RS04255 0.16 -0.8 887,189 + +1.0 887,190 - DZA65_RS04255 0.16 -1.0 887,190 - DZA65_RS04255 0.16 +0.0 887,190 - DZA65_RS04255 0.16 -1.5 887,190 - DZA65_RS04255 0.16 -0.6 887,238 + DZA65_RS04255 0.20 -1.8 887,238 + DZA65_RS04255 0.20 -2.0 887,239 - DZA65_RS04255 0.20 -1.6 887,346 + DZA65_RS04255 0.29 -0.5 887,347 - DZA65_RS04255 0.29 -1.3 887,347 - DZA65_RS04255 0.29 -1.0 887,347 - DZA65_RS04255 0.29 -0.2 887,351 + DZA65_RS04255 0.29 +0.4 887,351 + DZA65_RS04255 0.29 +0.1 887,351 + DZA65_RS04255 0.29 +1.0 887,351 + DZA65_RS04255 0.29 -0.5 887,351 + DZA65_RS04255 0.29 -0.3 887,352 - DZA65_RS04255 0.30 +0.3 887,400 + DZA65_RS04255 0.33 -1.3 887,400 + DZA65_RS04255 0.33 -0.9 887,400 + DZA65_RS04255 0.33 -0.3 887,488 + DZA65_RS04255 0.41 +0.0 887,488 + DZA65_RS04255 0.41 -1.8 887,488 + DZA65_RS04255 0.41 -1.3 887,488 + DZA65_RS04255 0.41 +0.0 887,488 + DZA65_RS04255 0.41 -0.3 887,488 + DZA65_RS04255 0.41 -2.0 887,488 + DZA65_RS04255 0.41 -0.1 887,488 + DZA65_RS04255 0.41 -1.0 887,488 + DZA65_RS04255 0.41 -2.2 887,488 + DZA65_RS04255 0.41 +0.4 887,489 - DZA65_RS04255 0.41 -1.8 887,489 - DZA65_RS04255 0.41 -0.7 887,489 - DZA65_RS04255 0.41 -0.3 887,489 - DZA65_RS04255 0.41 -0.6 887,489 - DZA65_RS04255 0.41 -1.0 887,489 - DZA65_RS04255 0.41 +1.6 887,489 - DZA65_RS04255 0.41 -0.6 887,489 - DZA65_RS04255 0.41 +0.7 887,489 - DZA65_RS04255 0.41 -1.0 887,489 - DZA65_RS04255 0.41 -1.0 887,490 + DZA65_RS04255 0.41 -0.4 887,490 + DZA65_RS04255 0.41 -1.2 887,490 + DZA65_RS04255 0.41 -0.8 887,490 + DZA65_RS04255 0.41 -0.4 887,490 + DZA65_RS04255 0.41 -2.0 887,491 - DZA65_RS04255 0.41 -0.8 887,491 - DZA65_RS04255 0.41 +0.0 887,491 - +0.0 887,491 - DZA65_RS04255 0.41 +0.4 887,491 - DZA65_RS04255 0.41 -1.6 887,491 - DZA65_RS04255 0.41 -0.3 887,491 - DZA65_RS04255 0.41 +1.0 887,491 - DZA65_RS04255 0.41 -1.8 887,491 - DZA65_RS04255 0.41 -0.6
Or see this region's nucleotide sequence