Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03092 and ECD_03093 are separated by 193 nucleotides ECD_03093 and ECD_03094 are separated by 153 nucleotides
ECD_03092: ECD_03092 - divisome ATPase, at 3,240,033 to 3,241,160
_03092
ECD_03093: ECD_03093 - DUF1043 family inner membrane-anchored protein, at 3,241,354 to 3,241,752
_03093
ECD_03094: ECD_03094 - serine endoprotease, periplasmic, at 3,241,906 to 3,243,273
_03094
Position (kb)
3241
3242 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3240.444 kb on + strand, within ECD_03092 at 3240.449 kb on + strand, within ECD_03092 at 3240.449 kb on + strand, within ECD_03092 at 3240.450 kb on - strand, within ECD_03092 at 3240.512 kb on + strand, within ECD_03092 at 3240.512 kb on + strand, within ECD_03092 at 3240.512 kb on + strand, within ECD_03092 at 3240.549 kb on + strand, within ECD_03092 at 3240.549 kb on + strand, within ECD_03092 at 3240.550 kb on - strand, within ECD_03092 at 3240.550 kb on - strand, within ECD_03092 at 3240.567 kb on - strand, within ECD_03092 at 3240.567 kb on - strand, within ECD_03092 at 3240.636 kb on - strand, within ECD_03092 at 3240.697 kb on - strand, within ECD_03092 at 3240.697 kb on - strand, within ECD_03092 at 3240.713 kb on + strand, within ECD_03092 at 3240.814 kb on - strand, within ECD_03092 at 3240.814 kb on - strand, within ECD_03092 at 3240.836 kb on + strand, within ECD_03092 at 3240.886 kb on + strand, within ECD_03092 at 3240.887 kb on - strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.935 kb on + strand, within ECD_03092 at 3240.936 kb on - strand, within ECD_03092 at 3240.936 kb on - strand, within ECD_03092 at 3240.936 kb on - strand, within ECD_03092 at 3240.936 kb on - strand, within ECD_03092 at 3240.936 kb on - strand, within ECD_03092 at 3240.936 kb on - strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.937 kb on + strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.938 kb on - strand, within ECD_03092 at 3240.939 kb on + strand, within ECD_03092 at 3240.939 kb on + strand, within ECD_03092 at 3240.939 kb on + strand, within ECD_03092 at 3240.939 kb on + strand, within ECD_03092 at 3240.939 kb on + strand, within ECD_03092 at 3240.939 kb on + strand, within ECD_03092 at 3240.940 kb on - strand, within ECD_03092 at 3241.038 kb on - strand, within ECD_03092 at 3241.038 kb on - strand, within ECD_03092 at 3241.059 kb on - strand at 3241.059 kb on - strand at 3241.241 kb on - strand at 3241.279 kb on + strand at 3241.279 kb on + strand at 3241.279 kb on + strand at 3241.279 kb on + strand at 3241.280 kb on - strand at 3241.280 kb on - strand at 3241.287 kb on + strand at 3241.288 kb on - strand at 3241.288 kb on - strand at 3241.366 kb on + strand at 3241.373 kb on + strand at 3241.476 kb on + strand, within ECD_03093 at 3241.573 kb on + strand, within ECD_03093 at 3241.750 kb on + strand at 3241.805 kb on - strand at 3241.811 kb on + strand at 3241.812 kb on - strand at 3241.812 kb on - strand at 3241.890 kb on + strand at 3241.937 kb on + strand at 3241.943 kb on + strand at 3241.943 kb on + strand at 3242.206 kb on - strand, within ECD_03094 at 3242.238 kb on + strand, within ECD_03094 at 3242.260 kb on - strand, within ECD_03094 at 3242.471 kb on + strand, within ECD_03094 at 3242.472 kb on - strand, within ECD_03094 at 3242.561 kb on + strand, within ECD_03094 at 3242.561 kb on + strand, within ECD_03094 at 3242.580 kb on - strand, within ECD_03094 at 3242.652 kb on + strand, within ECD_03094 at 3242.653 kb on - strand, within ECD_03094
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 3,240,444 + ECD_03092 0.36 -0.7 3,240,449 + ECD_03092 0.37 -0.0 3,240,449 + ECD_03092 0.37 -0.5 3,240,450 - ECD_03092 0.37 -1.2 3,240,512 + ECD_03092 0.42 -0.4 3,240,512 + ECD_03092 0.42 +0.3 3,240,512 + ECD_03092 0.42 -0.4 3,240,549 + ECD_03092 0.46 -0.1 3,240,549 + ECD_03092 0.46 -0.7 3,240,550 - ECD_03092 0.46 -0.6 3,240,550 - ECD_03092 0.46 -1.9 3,240,567 - ECD_03092 0.47 -1.0 3,240,567 - ECD_03092 0.47 +0.1 3,240,636 - ECD_03092 0.53 -0.0 3,240,697 - ECD_03092 0.59 +2.5 3,240,697 - ECD_03092 0.59 -0.7 3,240,713 + ECD_03092 0.60 +0.5 3,240,814 - ECD_03092 0.69 -0.2 3,240,814 - ECD_03092 0.69 -0.4 3,240,836 + ECD_03092 0.71 -0.6 3,240,886 + ECD_03092 0.76 +0.8 3,240,887 - ECD_03092 0.76 +0.3 3,240,935 + ECD_03092 0.80 -0.9 3,240,935 + ECD_03092 0.80 -0.8 3,240,935 + ECD_03092 0.80 -0.2 3,240,935 + ECD_03092 0.80 +0.5 3,240,935 + ECD_03092 0.80 -0.2 3,240,935 + ECD_03092 0.80 -0.8 3,240,935 + ECD_03092 0.80 +0.0 3,240,935 + ECD_03092 0.80 -0.4 3,240,935 + ECD_03092 0.80 +0.8 3,240,936 - ECD_03092 0.80 +0.7 3,240,936 - ECD_03092 0.80 +0.2 3,240,936 - ECD_03092 0.80 -1.2 3,240,936 - ECD_03092 0.80 +0.5 3,240,936 - ECD_03092 0.80 -0.8 3,240,936 - ECD_03092 0.80 -0.4 3,240,937 + ECD_03092 0.80 -1.0 3,240,937 + ECD_03092 0.80 -1.0 3,240,937 + ECD_03092 0.80 -1.0 3,240,937 + ECD_03092 0.80 -1.3 3,240,937 + ECD_03092 0.80 -1.4 3,240,937 + ECD_03092 0.80 -0.7 3,240,937 + ECD_03092 0.80 -0.9 3,240,937 + ECD_03092 0.80 -2.6 3,240,937 + ECD_03092 0.80 -1.5 3,240,937 + ECD_03092 0.80 -1.5 3,240,937 + ECD_03092 0.80 -0.1 3,240,938 - ECD_03092 0.80 -0.7 3,240,938 - ECD_03092 0.80 +0.5 3,240,938 - ECD_03092 0.80 -0.6 3,240,938 - ECD_03092 0.80 -1.3 3,240,938 - ECD_03092 0.80 -0.4 3,240,938 - ECD_03092 0.80 +0.1 3,240,938 - ECD_03092 0.80 +1.3 3,240,938 - ECD_03092 0.80 -0.4 3,240,938 - ECD_03092 0.80 -0.2 3,240,939 + ECD_03092 0.80 +0.9 3,240,939 + ECD_03092 0.80 -0.1 3,240,939 + ECD_03092 0.80 -0.0 3,240,939 + ECD_03092 0.80 -0.5 3,240,939 + ECD_03092 0.80 +0.2 3,240,939 + ECD_03092 0.80 +0.8 3,240,940 - ECD_03092 0.80 -0.3 3,241,038 - ECD_03092 0.89 -1.1 3,241,038 - ECD_03092 0.89 -0.8 3,241,059 - -1.2 3,241,059 - -0.4 3,241,241 - +0.6 3,241,279 + -0.3 3,241,279 + -0.2 3,241,279 + +0.5 3,241,279 + +0.6 3,241,280 - -0.6 3,241,280 - -0.7 3,241,287 + -0.0 3,241,288 - -0.8 3,241,288 - -3.0 3,241,366 + -0.7 3,241,373 + -0.4 3,241,476 + ECD_03093 0.31 -0.7 3,241,573 + ECD_03093 0.55 -0.8 3,241,750 + +1.1 3,241,805 - +1.5 3,241,811 + +1.4 3,241,812 - -1.1 3,241,812 - -0.0 3,241,890 + -0.0 3,241,937 + -0.7 3,241,943 + -0.5 3,241,943 + -0.0 3,242,206 - ECD_03094 0.22 -0.4 3,242,238 + ECD_03094 0.24 +0.2 3,242,260 - ECD_03094 0.26 -0.5 3,242,471 + ECD_03094 0.41 -0.2 3,242,472 - ECD_03094 0.41 -0.2 3,242,561 + ECD_03094 0.48 +0.6 3,242,561 + ECD_03094 0.48 -2.3 3,242,580 - ECD_03094 0.49 +0.1 3,242,652 + ECD_03094 0.55 +0.2 3,242,653 - ECD_03094 0.55 +0.3
Or see this region's nucleotide sequence