Experiment: L-Arabinose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00550 and ECD_00551 are separated by 243 nucleotides ECD_00551 and ECD_00552 are separated by 2 nucleotides ECD_00552 and ECD_00553 overlap by 4 nucleotides
ECD_00550: ECD_00550 - ferrienterobactin outer membrane transporter, at 570,740 to 572,980
_00550
ECD_00551: ECD_00551 - enterobactin/ferrienterobactin esterase, at 573,224 to 574,426
_00551
ECD_00552: ECD_00552 - stimulator of EntF adenylation activity, MbtH-like, at 574,429 to 574,647
_00552
ECD_00553: ECD_00553 - enterobactin synthase multienzyme complex component, ATP-dependent, at 574,644 to 578,525
_00553
Position (kb) 573
574
575 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 572.417 kb on - strand, within ECD_00550 at 572.417 kb on - strand, within ECD_00550 at 572.585 kb on - strand, within ECD_00550 at 572.696 kb on - strand, within ECD_00550 at 572.847 kb on - strand at 572.875 kb on + strand at 572.876 kb on - strand at 572.876 kb on - strand at 572.876 kb on - strand at 572.876 kb on - strand at 572.876 kb on - strand at 572.879 kb on - strand at 572.900 kb on - strand at 572.931 kb on + strand at 572.932 kb on - strand at 573.100 kb on - strand at 573.100 kb on - strand at 573.503 kb on - strand, within ECD_00551 at 573.503 kb on - strand, within ECD_00551 at 573.580 kb on - strand, within ECD_00551 at 573.613 kb on - strand, within ECD_00551 at 573.909 kb on - strand, within ECD_00551 at 573.962 kb on - strand, within ECD_00551 at 574.028 kb on - strand, within ECD_00551 at 574.125 kb on + strand, within ECD_00551 at 574.299 kb on + strand, within ECD_00551 at 574.475 kb on + strand, within ECD_00552 at 574.475 kb on + strand, within ECD_00552 at 574.657 kb on + strand at 574.738 kb on - strand at 574.812 kb on - strand at 575.173 kb on + strand, within ECD_00553 at 575.312 kb on + strand, within ECD_00553 at 575.336 kb on + strand, within ECD_00553
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose remove 572,417 - ECD_00550 0.75 -1.5 572,417 - ECD_00550 0.75 -0.9 572,585 - ECD_00550 0.82 -1.8 572,696 - ECD_00550 0.87 -1.1 572,847 - -0.6 572,875 + -0.4 572,876 - -0.9 572,876 - -1.3 572,876 - -1.9 572,876 - -0.1 572,876 - -0.3 572,879 - -1.5 572,900 - -1.0 572,931 + -0.8 572,932 - -0.8 573,100 - -0.7 573,100 - +0.6 573,503 - ECD_00551 0.23 -3.1 573,503 - ECD_00551 0.23 -1.5 573,580 - ECD_00551 0.30 -1.7 573,613 - ECD_00551 0.32 -0.6 573,909 - ECD_00551 0.57 -1.2 573,962 - ECD_00551 0.61 -0.8 574,028 - ECD_00551 0.67 -0.4 574,125 + ECD_00551 0.75 -0.3 574,299 + ECD_00551 0.89 -2.1 574,475 + ECD_00552 0.21 +0.3 574,475 + ECD_00552 0.21 +0.8 574,657 + +0.0 574,738 - +0.4 574,812 - -1.2 575,173 + ECD_00553 0.14 -0.2 575,312 + ECD_00553 0.17 -0.4 575,336 + ECD_00553 0.18 -1.1
Or see this region's nucleotide sequence